FFCP PHASE1:Hg19::chr19:12777509..12777574,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4125 | |EntrezGene=4125 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6826 | |HGNC=6826 | ||
|TSSclassifier=strong | |||
|UniProt=G5E928,O00754,B4E0K9 | |UniProt=G5E928,O00754,B4E0K9 | ||
|association_with_transcript=0bp_to_ENST00000221363,ENST00000456935,ENST00000486847,ENST00000536796_5end | |association_with_transcript=0bp_to_ENST00000221363,ENST00000456935,ENST00000486847,ENST00000536796_5end | ||
|cluster_id=chr19:12777509..12777574,- | |||
|description=CAGE_peak_1_at_MAN2B1_5end | |description=CAGE_peak_1_at_MAN2B1_5end | ||
|id=chr19:12777509..12777574,- | |id=chr19:12777509..12777574,- | ||
|ontology_enrichment_celltype=CL:0000738!1.83e-34!140;CL:0000037!3.08e-34!172;CL:0000566!3.08e-34!172;CL:0000988!7.50e-34!182;CL:0002032!1.11e-31!165;CL:0000837!1.11e-31!165;CL:0000766!9.34e-31!76;CL:0000763!7.33e-30!112;CL:0000049!7.33e-30!112;CL:0002009!1.22e-29!65;CL:0002087!1.58e-28!119;CL:0000557!1.80e-28!71;CL:0002194!2.12e-28!63;CL:0000576!2.12e-28!63;CL:0000040!2.12e-28!63;CL:0000559!2.12e-28!63;CL:0002057!7.70e-26!42;CL:0002031!1.22e-25!124;CL:0000839!3.27e-24!70;CL:0002320!5.58e-22!365;CL:0000860!4.80e-21!45;CL:0000134!1.28e-20!358;CL:0000048!1.44e-17!430;CL:0000219!2.00e-16!390;CL:0000723!2.80e-16!436;CL:0000034!8.63e-16!444;CL:0002371!1.19e-12!591;CL:0000144!8.03e-11!625;CL:0000451!1.76e-07!10 | |ontology_enrichment_celltype=CL:0000738!1.83e-34!140;CL:0000037!3.08e-34!172;CL:0000566!3.08e-34!172;CL:0000988!7.50e-34!182;CL:0002032!1.11e-31!165;CL:0000837!1.11e-31!165;CL:0000766!9.34e-31!76;CL:0000763!7.33e-30!112;CL:0000049!7.33e-30!112;CL:0002009!1.22e-29!65;CL:0002087!1.58e-28!119;CL:0000557!1.80e-28!71;CL:0002194!2.12e-28!63;CL:0000576!2.12e-28!63;CL:0000040!2.12e-28!63;CL:0000559!2.12e-28!63;CL:0002057!7.70e-26!42;CL:0002031!1.22e-25!124;CL:0000839!3.27e-24!70;CL:0002320!5.58e-22!365;CL:0000860!4.80e-21!45;CL:0000134!1.28e-20!358;CL:0000048!1.44e-17!430;CL:0000219!2.00e-16!390;CL:0000723!2.80e-16!436;CL:0000034!8.63e-16!444;CL:0002371!1.19e-12!591;CL:0000144!8.03e-11!625;CL:0000451!1.76e-07!10 | ||
|ontology_enrichment_celltype_v019=CL:0000473;1.82e-19;39!CL:0000234;1.82e-19;39!CL:0000860;4.04e-19;33!CL:0002057;4.04e-19;33!CL:0000576;2.81e-18;48!CL:0000766;1.88e-14;69!CL:0000763;3.36e-10;100!CL:0000738;4.60e-09;136!CL:0002087;4.86e-09;104!CL:0000451;1.75e-07;10!CL:0000988;4.37e-07;177 | |ontology_enrichment_celltype_v019=CL:0000473;1.82e-19;39!CL:0000234;1.82e-19;39!CL:0000860;4.04e-19;33!CL:0002057;4.04e-19;33!CL:0000576;2.81e-18;48!CL:0000766;1.88e-14;69!CL:0000763;3.36e-10;100!CL:0000738;4.60e-09;136!CL:0002087;4.86e-09;104!CL:0000451;1.75e-07;10!CL:0000988;4.37e-07;177 | ||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.71e-37,136;CL:0000037,7.01e-37,168;CL:0000988,2.55e-36,177;CL:0000766,4.91e-35,72;CL:0002009,2.56e-34,61;CL:0002032,2.90e-34,161;CL:0000837,2.90e-34,161;CL:0000763,4.65e-33,108;CL:0000049,4.65e-33,108;CL:0002194,4.81e-33,59;CL:0000576,4.81e-33,59;CL:0000040,4.81e-33,59;CL:0000559,4.81e-33,59;CL:0000557,9.87e-33,67;CL:0002087,1.66e-31,115;CL:0000473,5.45e-30,48;CL:0000234,5.45e-30,48;CL:0002031,2.43e-28,120;CL:0000839,4.69e-28,66;CL:0000860,7.70e-26,42;CL:0002057,7.70e-26,42;CL:0002320,2.22e-23,361;CL:0000134,5.56e-22,354;CL:0000048,9.88e-19,427;CL:0000219,1.38e-17,386;CL:0000723,2.15e-17,433;CL:0000034,7.00e-17,441;CL:0000451,1.76e-07,10 | |||
|ontology_enrichment_development_v019=CL:0002057;8.12e-19;42!CL:0000049;6.18e-10;108 | |ontology_enrichment_development_v019=CL:0002057;8.12e-19;42!CL:0000049;6.18e-10;108 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!3.59e-33!112;UBERON:0002390!1.07e-30!102;UBERON:0003061!1.07e-30!102;UBERON:0002405!1.07e-27!115;UBERON:0002371!2.85e-26!80;UBERON:0001474!1.09e-22!86;UBERON:0003081!1.53e-21!216;UBERON:0002384!4.10e-21!375;UBERON:0004765!7.21e-18!101;UBERON:0001434!7.21e-18!101;UBERON:0002204!1.05e-10!167 | |ontology_enrichment_uberon=UBERON:0002193!3.59e-33!112;UBERON:0002390!1.07e-30!102;UBERON:0003061!1.07e-30!102;UBERON:0002405!1.07e-27!115;UBERON:0002371!2.85e-26!80;UBERON:0001474!1.09e-22!86;UBERON:0003081!1.53e-21!216;UBERON:0002384!4.10e-21!375;UBERON:0004765!7.21e-18!101;UBERON:0001434!7.21e-18!101;UBERON:0002204!1.05e-10!167 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.33e-36,108;UBERON:0002390,3.62e-34,98;UBERON:0003061,3.62e-34,98;UBERON:0002405,7.22e-33,93;UBERON:0002371,5.72e-30,76;UBERON:0001474,7.17e-26,82;UBERON:0004765,5.92e-24,90;UBERON:0002384,1.81e-22,371;UBERON:0003081,5.24e-22,203;UBERON:0001434,1.49e-20,100;UBERON:0002204,2.99e-12,167;UBERON:0000926,3.17e-11,315;UBERON:0004120,3.17e-11,315;UBERON:0006603,3.17e-11,315 | |||
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63902259,131.112513352022 | ||
|short_description=p1@MAN2B1 | |short_description=p1@MAN2B1 | ||
}} | }} |
Latest revision as of 19:38, 15 September 2015
Short description: | p1@MAN2B1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MAN2B1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000221363, ENST00000456935, ENST00000486847, ENST00000536796_5end |
EntrezGene: | MAN2B1 |
HGNC: | 6826 |
UniProt: | G5E928O00754B4E0K9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 1.71e-37 | 136 |
hematopoietic stem cell | 7.01e-37 | 168 |
hematopoietic cell | 2.55e-36 | 177 |
myeloid leukocyte | 4.91e-35 | 72 |
macrophage dendritic cell progenitor | 2.56e-34 | 61 |
hematopoietic oligopotent progenitor cell | 2.90e-34 | 161 |
hematopoietic multipotent progenitor cell | 2.90e-34 | 161 |
myeloid cell | 4.65e-33 | 108 |
common myeloid progenitor | 4.65e-33 | 108 |
monopoietic cell | 4.81e-33 | 59 |
monocyte | 4.81e-33 | 59 |
monoblast | 4.81e-33 | 59 |
promonocyte | 4.81e-33 | 59 |
granulocyte monocyte progenitor cell | 9.87e-33 | 67 |
nongranular leukocyte | 1.66e-31 | 115 |
defensive cell | 5.45e-30 | 48 |
phagocyte | 5.45e-30 | 48 |
hematopoietic lineage restricted progenitor cell | 2.43e-28 | 120 |
myeloid lineage restricted progenitor cell | 4.69e-28 | 66 |
classical monocyte | 7.70e-26 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.70e-26 | 42 |
connective tissue cell | 2.22e-23 | 361 |
mesenchymal cell | 5.56e-22 | 354 |
multi fate stem cell | 9.88e-19 | 427 |
motile cell | 1.38e-17 | 386 |
somatic stem cell | 2.15e-17 | 433 |
stem cell | 7.00e-17 | 441 |
dendritic cell | 1.76e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 1.33e-36 | 108 |
hematopoietic system | 3.62e-34 | 98 |
blood island | 3.62e-34 | 98 |
immune system | 7.22e-33 | 93 |
bone marrow | 5.72e-30 | 76 |
bone element | 7.17e-26 | 82 |
skeletal element | 5.92e-24 | 90 |
connective tissue | 1.81e-22 | 371 |
lateral plate mesoderm | 5.24e-22 | 203 |
skeletal system | 1.49e-20 | 100 |
musculoskeletal system | 2.99e-12 | 167 |
mesoderm | 3.17e-11 | 315 |
mesoderm-derived structure | 3.17e-11 | 315 |
presumptive mesoderm | 3.17e-11 | 315 |