FFCP PHASE1:Hg19::chrX:49089791..49089807,-: Difference between revisions
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|id=chrX:49089791..49089807,-
|short_description=p1@CACNA1F
|description=CAGE_peak_1_at_CACNA1F_5end
|association_with_transcript=-20bp_to_ENST00000376251_5end
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=778 | |EntrezGene=778 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1393 | |HGNC=1393 | ||
|TSSclassifier=strong | |||
|UniProt=O95226 | |UniProt=O95226 | ||
|association_with_transcript=-20bp_to_ENST00000376251_5end | |||
|cluster_id=chrX:49089791..49089807,- | |||
|coexpression_cluster_id=C24 | |||
|description=CAGE_peak_1_at_CACNA1F_5end | |||
|id=chrX:49089791..49089807,- | |||
|ontology_enrichment_celltype=CL:0002322!1.34e-22!5 | |||
|ontology_enrichment_celltype_v019=CL:0000047;3.43e-12;2!CL:0002319;5.70e-08;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,5.64e-08,25 | |||
|ontology_enrichment_development_v019=UBERON:0003056;1.98e-30;3!UBERON:0006238;5.41e-09;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3093;2.55e-08;11!DOID:5409;8.61e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:3093,2.55e-08,11;DOID:5409,8.61e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0001905!1.29e-26!2;UBERON:0002757!1.29e-26!2;UBERON:0010134!1.29e-26!2;UBERON:0002784!1.29e-26!2;UBERON:0005408!1.29e-26!2;UBERON:0001899!1.29e-26!2;UBERON:0003296!8.06e-14!4;UBERON:0010133!8.06e-14!4;UBERON:0000966!3.72e-11!5;UBERON:0005388!3.72e-11!5;UBERON:0001802!3.72e-11!5;UBERON:0000970!2.35e-10!20;UBERON:0002104!7.14e-10!21;UBERON:0000020!4.94e-09!23;UBERON:0001032!1.15e-08!24;UBERON:0004456!1.15e-08!24;UBERON:0001894!2.78e-08!7;UBERON:0006222!2.78e-08!7;UBERON:0002360!1.99e-07!2;UBERON:0000094!1.99e-07!2;UBERON:0007645!1.99e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;2.04e-45;2!UBERON:0002757;2.04e-45;2!UBERON:0010134;2.04e-45;2!UBERON:0005408;2.04e-45;2!UBERON:0001899;2.04e-45;2!UBERON:0003296;2.63e-23;4!UBERON:0010133;2.63e-23;4!UBERON:0002784;2.63e-23;4!UBERON:0000966;1.04e-18;5!UBERON:0005388;1.04e-18;5!UBERON:0001802;1.04e-18;5!UBERON:0001894;8.94e-14;7!UBERON:0000970;1.23e-10;20!UBERON:0002104;3.68e-10;21!UBERON:0000020;2.48e-09;23!UBERON:0001032;5.73e-09;24!UBERON:0004456;5.73e-09;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,2.04e-45,2;UBERON:0002757,2.04e-45,2;UBERON:0010134,2.04e-45,2;UBERON:0005408,2.04e-45,2;UBERON:0001899,2.04e-45,2;UBERON:0003296,2.63e-23,4;UBERON:0010133,2.63e-23,4;UBERON:0002784,2.63e-23,4;UBERON:0000966,9.04e-16,6;UBERON:0005388,9.04e-16,6;UBERON:0001802,9.04e-16,6;UBERON:0001894,8.94e-14,7;UBERON:0006222,8.94e-14,7;UBERON:0000970,3.68e-10,21;UBERON:0002104,3.68e-10,21;UBERON:0000020,5.73e-09,24;UBERON:0001032,5.73e-09,24;UBERON:0004456,5.73e-09,24;UBERON:0001017,8.08e-07,81 | |||
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|short_description=p1@CACNA1F | |||
}} | }} |
Latest revision as of 21:47, 15 September 2015
Short description: | p1@CACNA1F |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CACNA1F_5end |
Coexpression cluster: | C24_pineal_eye_retina_retinoblastoma_medulloblastoma_small_cerebral |
Association with transcript: | -20bp_to_ENST00000376251_5end |
EntrezGene: | CACNA1F |
HGNC: | 1393 |
UniProt: | O95226 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 5.64e-08 | 25 |
Ontology term | p-value | n |
---|---|---|
pineal body | 2.04e-45 | 2 |
regional part of epithalamus | 2.04e-45 | 2 |
secretory circumventricular organ | 2.04e-45 | 2 |
circumventricular organ | 2.04e-45 | 2 |
epithalamus | 2.04e-45 | 2 |
gland of diencephalon | 2.63e-23 | 4 |
neuroendocrine gland | 2.63e-23 | 4 |
regional part of diencephalon | 2.63e-23 | 4 |
retina | 9.04e-16 | 6 |
photoreceptor array | 9.04e-16 | 6 |
posterior segment of eyeball | 9.04e-16 | 6 |
diencephalon | 8.94e-14 | 7 |
future diencephalon | 8.94e-14 | 7 |
eye | 3.68e-10 | 21 |
visual system | 3.68e-10 | 21 |
sense organ | 5.73e-09 | 24 |
sensory system | 5.73e-09 | 24 |
entire sense organ system | 5.73e-09 | 24 |
central nervous system | 8.08e-07 | 81 |
Ontology term | p-value | n |
---|---|---|
nervous system cancer | 2.55e-08 | 11 |
lung small cell carcinoma | 8.61e-07 | 4 |