FFCP PHASE1:Hg19::chrX:49595001..49595028,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chrX:49595001..49595028,+ to FFCP PHASE1:Hg19::chrX:49595001..49595028,+: NSchange) |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9506 | |EntrezGene=9506 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4108 | |HGNC=4108 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-258bp_to_ENST00000474146_5end | |||
|cluster_id=chrX:49595001..49595028,+ | |||
|coexpression_cluster_id=C923 | |||
|description=CAGE_peak_2_at_PAGE4_5end | |||
|id=chrX:49595001..49595028,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0007297;8.05e-30;2!UBERON:0005754;9.99e-16;1!UBERON:0003124;3.17e-15;1!UBERON:0005795;1.67e-13;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0006947!1.66e-19!3;UBERON:0004054!1.66e-19!3;UBERON:0003135!1.80e-19!11;UBERON:0005904!9.15e-15!4;UBERON:0007023!1.05e-14!115;UBERON:0003133!2.90e-13!48;UBERON:0001954!6.71e-13!2;UBERON:0003022!6.71e-13!2;UBERON:0002421!6.71e-13!2;UBERON:0002600!6.71e-13!2;UBERON:0003101!8.57e-13!22;UBERON:0000079!8.57e-13!22;UBERON:0005156!1.57e-12!59;UBERON:0000990!1.57e-12!59;UBERON:0004175!3.17e-11!25;UBERON:0000349!4.32e-11!5;UBERON:0001301!1.06e-07!1;UBERON:0001046!1.08e-07!19;UBERON:0006834!1.20e-07!1;UBERON:0000998!1.27e-07!1;UBERON:0006868!1.27e-07!1;UBERON:0001000!1.36e-07!1;UBERON:0005352!1.36e-07!1;UBERON:0000473!2.34e-07!8;UBERON:0000996!2.84e-07!1;UBERON:0000989!3.41e-07!1;UBERON:0008811!3.41e-07!1;UBERON:0006258!3.41e-07!1;UBERON:0005876!3.41e-07!1;UBERON:0004874!3.41e-07!1;UBERON:0003112!5.84e-07!1;UBERON:0000032!5.84e-07!1;UBERON:0005253!5.84e-07!1;UBERON:0003128!5.84e-07!1;UBERON:0002241!5.84e-07!1;UBERON:0001703!5.84e-07!1;UBERON:0004761!5.84e-07!1;UBERON:0009617!5.84e-07!1;UBERON:0001052!7.00e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0006947;1.24e-43;3!UBERON:0004054;1.24e-43;3!UBERON:0005904;6.19e-33;4!UBERON:0003135;3.75e-21;11!UBERON:0004175;4.57e-17;21!UBERON:0003101;2.42e-16;22!UBERON:0000079;2.42e-16;22!UBERON:0005795;5.56e-16;1!UBERON:0001301;6.44e-16;1!UBERON:0006834;8.63e-16;1!UBERON:0000998;9.99e-16;1!UBERON:0006868;9.99e-16;1!UBERON:0001000;1.16e-15;1!UBERON:0005352;1.16e-15;1!UBERON:0000058;1.35e-13;10!UBERON:0003133;2.82e-10;44!UBERON:0005156;6.21e-10;59!UBERON:0000990;6.21e-10;59!UBERON:0001954;2.00e-08;2!UBERON:0003022;2.00e-08;2!UBERON:0002421;2.00e-08;2!UBERON:0002600;2.00e-08;2!UBERON:0000473;4.34e-08;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006947,1.24e-43,3;UBERON:0004054,1.24e-43,3;UBERON:0005904,6.19e-33,4;UBERON:0003135,3.56e-21,11;UBERON:0004175,3.15e-20,25;UBERON:0005156,1.10e-18,59;UBERON:0000990,1.10e-18,59;UBERON:0003133,2.90e-18,48;UBERON:0003101,2.35e-16,22;UBERON:0000079,2.35e-16,22;UBERON:0001301,6.44e-16,1;UBERON:0006834,8.63e-16,1;UBERON:0000998,9.99e-16,1;UBERON:0006868,9.99e-16,1;UBERON:0001000,1.16e-15,1;UBERON:0005352,1.16e-15,1;UBERON:0007023,1.84e-11,114;UBERON:0005795,1.23e-10,22;UBERON:0001954,2.15e-08,2;UBERON:0003022,2.15e-08,2;UBERON:0002421,2.15e-08,2;UBERON:0002600,2.15e-08,2;UBERON:0000473,4.19e-08,8;UBERON:0006554,1.46e-07,47;UBERON:0000058,2.04e-07,19;UBERON:0001008,2.11e-07,48;UBERON:0000080,2.29e-07,9;UBERON:0002120,2.29e-07,9;UBERON:0004875,2.29e-07,9;UBERON:0005721,2.29e-07,9;UBERON:0005754,2.29e-07,9;UBERON:0007297,2.29e-07,9 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294605907474837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.68507104770311,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515205058238611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0.295930216910801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.38545801361771,0,0.46112780877612,0,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0,0,0.565412285735763,0,0,0,0,0,0,0,0,0,0,0,0,0,10.6537788769335,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,70.2401206332961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.687219576995494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.16495949527454,0,0,0,0,0,3.18091875923721,0.272406812223151,0,0,0,0,0,0,0,0.86686278029118,1.46872846777995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,3.45967510406583,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,1.06442844195167,0,0,0,0,0,0,52.982837674097,0,0,0.913158720509496,0,0,0,0,0,0,0,0,0,0,0,0,0,13.9717726563007,0,0,0,0,0,0,0,0,0,0,0,0.198950775161368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.71315621269373,0.267964130156178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.7250094065156,90.7378477644097,0.665756774185513,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294605907474837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.68507104770311,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515205058238611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0.295930216910801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.38545801361771,0,0.46112780877612,0,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0,0,0.565412285735763,0,0,0,0,0,0,0,0,0,0,0,0,0,10.6537788769335,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,70.2401206332961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.687219576995494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.16495949527454,0,0,0,0,0,3.18091875923721,0.272406812223151,0,0,0,0,0,0,0,0.86686278029118,1.46872846777995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,3.45967510406583,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,1.06442844195167,0,0,0,0,0,0,52.982837674097,0,0,0.913158720509496,0,0,0,0,0,0,0,0,0,0,0,0,0,13.9717726563007,0,0,0,0,0,0,0,0,0,0,0,0.198950775161368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.71315621269373,0.267964130156178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.7250094065156,90.7378477644097,0.665756774185513,0,0 | ||
|short_description=p2@PAGE4 | |||
}} | }} |
Latest revision as of 22:05, 15 September 2015
Short description: | p2@PAGE4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PAGE4_5end |
Coexpression cluster: | C923_uterus_epididymis_prostate_Hepatocyte_cervix_seminal_skin |
Association with transcript: | -258bp_to_ENST00000474146_5end |
EntrezGene: | PAGE4 |
HGNC: | 4108 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
male genital duct | 1.24e-43 | 3 |
internal male genitalia | 1.24e-43 | 3 |
duct of male reproductive system | 6.19e-33 | 4 |
male reproductive organ | 3.56e-21 | 11 |
internal genitalia | 3.15e-20 | 25 |
reproductive structure | 1.10e-18 | 59 |
reproductive system | 1.10e-18 | 59 |
reproductive organ | 2.90e-18 | 48 |
male organism | 2.35e-16 | 22 |
male reproductive system | 2.35e-16 | 22 |
epididymis | 6.44e-16 | 1 |
uterus or analog | 8.63e-16 | 1 |
seminal vesicle | 9.99e-16 | 1 |
seminal fluid secreting gland | 9.99e-16 | 1 |
vas deferens | 1.16e-15 | 1 |
spermatic cord | 1.16e-15 | 1 |
adult organism | 1.84e-11 | 114 |
embryonic uterus | 1.23e-10 | 22 |
Ammon's horn | 2.15e-08 | 2 |
lobe parts of cerebral cortex | 2.15e-08 | 2 |
hippocampal formation | 2.15e-08 | 2 |
limbic lobe | 2.15e-08 | 2 |
testis | 4.19e-08 | 8 |
urinary system structure | 1.46e-07 | 47 |
duct | 2.04e-07 | 19 |
renal system | 2.11e-07 | 48 |
mesonephros | 2.29e-07 | 9 |
pronephros | 2.29e-07 | 9 |
nephrogenic cord | 2.29e-07 | 9 |
pronephric mesoderm | 2.29e-07 | 9 |
rostral part of nephrogenic cord | 2.29e-07 | 9 |
presumptive pronephric mesoderm | 2.29e-07 | 9 |