FFCP PHASE1:Hg19::chr16:2808466..2808497,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23524 | |EntrezGene=23524 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16639 | |HGNC=16639 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UQ35 | |UniProt=Q9UQ35 | ||
|association_with_transcript=-487bp_to_AB015644_5end | |association_with_transcript=-487bp_to_AB015644_5end | ||
|cluster_id=chr16:2808466..2808497,+ | |||
|description=CAGE_peak_10_at_SRRM2_5end | |description=CAGE_peak_10_at_SRRM2_5end | ||
|id=chr16:2808466..2808497,+ | |id=chr16:2808466..2808497,+ | ||
|ontology_enrichment_celltype=CL:0002057!3.81e-09!42;CL:0000860!7.77e-09!45 | |ontology_enrichment_celltype=CL:0002057!3.81e-09!42;CL:0000860!7.77e-09!45 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.11e-09;33!CL:0002057;1.11e-09;33!CL:0000473;1.29e-07;39!CL:0000234;1.29e-07;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.95e-09,42;CL:0002057,1.95e-09,42;CL:0000473,4.33e-09,48;CL:0000234,4.33e-09,48 | |||
|ontology_enrichment_development_v019=CL:0002057;6.63e-07;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.47e-16!115;UBERON:0001049!2.62e-12!57;UBERON:0005068!2.62e-12!57;UBERON:0006241!2.62e-12!57;UBERON:0007135!2.62e-12!57;UBERON:0003080!3.58e-10!42;UBERON:0002780!5.82e-10!41;UBERON:0001890!5.82e-10!41;UBERON:0006240!5.82e-10!41;UBERON:0002616!4.70e-09!59;UBERON:0002020!6.48e-09!34;UBERON:0003528!6.48e-09!34;UBERON:0000955!2.00e-08!69;UBERON:0006238!2.00e-08!69;UBERON:0002791!2.73e-08!33;UBERON:0001017!6.68e-08!82;UBERON:0001893!8.10e-08!34;UBERON:0002346!1.67e-07!90;UBERON:0001869!3.11e-07!32;UBERON:0003075!5.95e-07!86;UBERON:0007284!5.95e-07!86;UBERON:0002619!7.70e-07!22 | |ontology_enrichment_uberon=UBERON:0007023!1.47e-16!115;UBERON:0001049!2.62e-12!57;UBERON:0005068!2.62e-12!57;UBERON:0006241!2.62e-12!57;UBERON:0007135!2.62e-12!57;UBERON:0003080!3.58e-10!42;UBERON:0002780!5.82e-10!41;UBERON:0001890!5.82e-10!41;UBERON:0006240!5.82e-10!41;UBERON:0002616!4.70e-09!59;UBERON:0002020!6.48e-09!34;UBERON:0003528!6.48e-09!34;UBERON:0000955!2.00e-08!69;UBERON:0006238!2.00e-08!69;UBERON:0002791!2.73e-08!33;UBERON:0001017!6.68e-08!82;UBERON:0001893!8.10e-08!34;UBERON:0002346!1.67e-07!90;UBERON:0001869!3.11e-07!32;UBERON:0003075!5.95e-07!86;UBERON:0007284!5.95e-07!86;UBERON:0002619!7.70e-07!22 | ||
|ontology_enrichment_uberon_v019=UBERON:0002780;3.29e-08;41!UBERON:0001890;3.29e-08;41!UBERON:0002791;1.67e-07;32!UBERON:0002619;2.12e-07;22!UBERON:0003528;2.49e-07;34!UBERON:0002020;2.49e-07;34!UBERON:0000073;8.48e-07;53!UBERON:0002616;8.48e-07;53!UBERON:0000922;8.79e-07;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,7.18e-15,114;UBERON:0001049,1.17e-12,56;UBERON:0005068,1.17e-12,56;UBERON:0006241,1.17e-12,56;UBERON:0007135,1.17e-12,56;UBERON:0000073,3.52e-11,53;UBERON:0002616,3.52e-11,53;UBERON:0002780,1.49e-10,41;UBERON:0001890,1.49e-10,41;UBERON:0003080,1.49e-10,41;UBERON:0006240,1.49e-10,41;UBERON:0002346,6.10e-10,86;UBERON:0003528,3.58e-09,34;UBERON:0002020,3.58e-09,34;UBERON:0003075,4.11e-09,82;UBERON:0007284,4.11e-09,82;UBERON:0002791,2.77e-08,32;UBERON:0001017,4.66e-08,81;UBERON:0001893,6.34e-08,34;UBERON:0000955,6.86e-08,68;UBERON:0006238,6.86e-08,68;UBERON:0002619,1.36e-07,22;UBERON:0001869,3.35e-07,32 | |||
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| ||
|short_description=p10@SRRM2 | |short_description=p10@SRRM2 | ||
}} | }} |
Latest revision as of 22:44, 15 September 2015
Short description: | p10@SRRM2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_SRRM2_5end |
Coexpression cluster: | NA |
Association with transcript: | -487bp_to_AB015644_5end |
EntrezGene: | SRRM2 |
HGNC: | 16639 |
UniProt: | Q9UQ35 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.95e-09 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.95e-09 | 42 |
defensive cell | 4.33e-09 | 48 |
phagocyte | 4.33e-09 | 48 |
Ontology term | p-value | n |
---|---|---|
adult organism | 7.18e-15 | 114 |
neural tube | 1.17e-12 | 56 |
neural rod | 1.17e-12 | 56 |
future spinal cord | 1.17e-12 | 56 |
neural keel | 1.17e-12 | 56 |
regional part of nervous system | 3.52e-11 | 53 |
regional part of brain | 3.52e-11 | 53 |
regional part of forebrain | 1.49e-10 | 41 |
forebrain | 1.49e-10 | 41 |
anterior neural tube | 1.49e-10 | 41 |
future forebrain | 1.49e-10 | 41 |
neurectoderm | 6.10e-10 | 86 |
brain grey matter | 3.58e-09 | 34 |
gray matter | 3.58e-09 | 34 |
neural plate | 4.11e-09 | 82 |
presumptive neural plate | 4.11e-09 | 82 |
regional part of telencephalon | 2.77e-08 | 32 |
central nervous system | 4.66e-08 | 81 |
telencephalon | 6.34e-08 | 34 |
brain | 6.86e-08 | 68 |
future brain | 6.86e-08 | 68 |
regional part of cerebral cortex | 1.36e-07 | 22 |
cerebral hemisphere | 3.35e-07 | 32 |