FFCP PHASE2:Hg19::chr19:13134457..13134462,+: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:4784 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:7788 |TSSclass...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=4784 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=7788 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt= | ||
Latest revision as of 23:07, 15 September 2015
| Short description: | p5@NFIX |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_5_at_NFIX_5end |
| Coexpression cluster: | C3753_parietal_brain_occipital_Mesenchymal_cerebellum_Neural_temporal |
| Association with transcript: | -323bp_to_uc002mwe.2_5end |
| EntrezGene: | NFIX |
| HGNC: | 7788 |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p5@NFIX |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| fibroblast | 4.21e-12 | 76 |
| muscle precursor cell | 1.85e-10 | 58 |
| myoblast | 1.85e-10 | 58 |
| multi-potent skeletal muscle stem cell | 1.85e-10 | 58 |
| muscle cell | 6.61e-10 | 55 |
| electrically responsive cell | 9.21e-10 | 61 |
| electrically active cell | 9.21e-10 | 61 |
| smooth muscle cell | 1.24e-07 | 43 |
| smooth muscle myoblast | 1.24e-07 | 43 |
Showing 1 to 9 of 9 entries
| Ontology term | p-value | n |
|---|---|---|
| nervous system | 1.49e-28 | 89 |
| central nervous system | 5.14e-28 | 81 |
| neural tube | 1.94e-26 | 56 |
| neural rod | 1.94e-26 | 56 |
| future spinal cord | 1.94e-26 | 56 |
| neural keel | 1.94e-26 | 56 |
| ectoderm-derived structure | 4.23e-26 | 171 |
| ectoderm | 4.23e-26 | 171 |
| presumptive ectoderm | 4.23e-26 | 171 |
| brain | 4.79e-26 | 68 |
Showing 1 to 10 of 60 entries
