FFCP PHASE1:Hg19::chr9:132597511..132597528,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51759 | |EntrezGene=51759 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24932 | |HGNC=24932 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=4bp_to_ENST00000461349_5end | |association_with_transcript=4bp_to_ENST00000461349_5end | ||
|cluster_id=chr9:132597511..132597528,- | |||
|coexpression_cluster_id=C14 | |coexpression_cluster_id=C14 | ||
|description=CAGE_peak_2_at_C9orf78_5end | |description=CAGE_peak_2_at_C9orf78_5end | ||
|id=chr9:132597511..132597528,- | |id=chr9:132597511..132597528,- | ||
|ontology_enrichment_celltype=CL:0000037!1.55e-31!172;CL:0000566!1.55e-31!172;CL:0002032!2.28e-29!165;CL:0000837!2.28e-29!165;CL:0000988!2.11e-28!182;CL:0000763!2.14e-21!112;CL:0000049!2.14e-21!112;CL:0000738!8.82e-21!140;CL:0002031!1.43e-16!124;CL:0002087!5.06e-16!119;CL:0000766!1.63e-10!76;CL:0000860!9.71e-10!45;CL:0000839!2.55e-09!70;CL:0002057!1.07e-08!42;CL:0000557!2.22e-08!71;CL:0002009!3.01e-08!65;CL:0000134!3.65e-08!358;CL:0002194!5.85e-08!63;CL:0000576!5.85e-08!63;CL:0000040!5.85e-08!63;CL:0000559!5.85e-08!63;CL:0000084!1.02e-07!25;CL:0000827!1.02e-07!25;CL:0000542!1.26e-07!53;CL:0000051!1.26e-07!53;CL:0000838!1.32e-07!52;CL:0000219!9.54e-07!390 | |ontology_enrichment_celltype=CL:0000037!1.55e-31!172;CL:0000566!1.55e-31!172;CL:0002032!2.28e-29!165;CL:0000837!2.28e-29!165;CL:0000988!2.11e-28!182;CL:0000763!2.14e-21!112;CL:0000049!2.14e-21!112;CL:0000738!8.82e-21!140;CL:0002031!1.43e-16!124;CL:0002087!5.06e-16!119;CL:0000766!1.63e-10!76;CL:0000860!9.71e-10!45;CL:0000839!2.55e-09!70;CL:0002057!1.07e-08!42;CL:0000557!2.22e-08!71;CL:0002009!3.01e-08!65;CL:0000134!3.65e-08!358;CL:0002194!5.85e-08!63;CL:0000576!5.85e-08!63;CL:0000040!5.85e-08!63;CL:0000559!5.85e-08!63;CL:0000084!1.02e-07!25;CL:0000827!1.02e-07!25;CL:0000542!1.26e-07!53;CL:0000051!1.26e-07!53;CL:0000838!1.32e-07!52;CL:0000219!9.54e-07!390 | ||
|ontology_enrichment_celltype_v019=CL:0000084;1.31e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,1.00e-30,168;CL:0002032,1.41e-28,161;CL:0000837,1.41e-28,161;CL:0000988,3.70e-28,177;CL:0000763,1.06e-20,108;CL:0000049,1.06e-20,108;CL:0000738,4.62e-20,136;CL:0002031,6.84e-16,120;CL:0002087,2.38e-15,115;CL:0000766,6.73e-10,72;CL:0000839,1.02e-08,66;CL:0000860,1.07e-08,42;CL:0002057,1.07e-08,42;CL:0000557,8.63e-08,67;CL:0000134,9.24e-08,354;CL:0000084,1.02e-07,25;CL:0000827,1.02e-07,25;CL:0002009,1.18e-07,61;CL:0000542,1.26e-07,53;CL:0000051,1.26e-07,53;CL:0000838,1.32e-07,52;CL:0002194,2.27e-07,59;CL:0000576,2.27e-07,59;CL:0000040,2.27e-07,59;CL:0000559,2.27e-07,59;CL:0000473,3.84e-07,48;CL:0000234,3.84e-07,48 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1240!7.17e-13!39;DOID:2531!1.03e-12!51;DOID:0060083!1.03e-12!51;DOID:8692!7.26e-11!31;DOID:162!2.75e-07!235;DOID:14566!3.23e-07!239 | |ontology_enrichment_disease=DOID:1240!7.17e-13!39;DOID:2531!1.03e-12!51;DOID:0060083!1.03e-12!51;DOID:8692!7.26e-11!31;DOID:162!2.75e-07!235;DOID:14566!3.23e-07!239 | ||
|ontology_enrichment_disease_v019=DOID:8692;6.88e-11;31!DOID:1240;1.15e-10;39!DOID:2531;5.60e-09;51!DOID:0060083;5.60e-09;51 | |||
|ontology_enrichment_disease_v019_2=DOID:1240,7.17e-13,39;DOID:2531,1.03e-12,51;DOID:0060083,1.03e-12,51;DOID:8692,7.26e-11,31;DOID:162,2.73e-07,235;DOID:14566,3.21e-07,239 | |||
|ontology_enrichment_uberon=UBERON:0002390!7.17e-13!102;UBERON:0003061!7.17e-13!102;UBERON:0002193!1.91e-10!112;UBERON:0000178!2.15e-09!15;UBERON:0000179!2.15e-09!15;UBERON:0000463!2.15e-09!15;UBERON:0001474!2.58e-07!86;UBERON:0002371!2.98e-07!80 | |ontology_enrichment_uberon=UBERON:0002390!7.17e-13!102;UBERON:0003061!7.17e-13!102;UBERON:0002193!1.91e-10!112;UBERON:0000178!2.15e-09!15;UBERON:0000179!2.15e-09!15;UBERON:0000463!2.15e-09!15;UBERON:0001474!2.58e-07!86;UBERON:0002371!2.98e-07!80 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.22e-09;15!UBERON:0000179;2.22e-09;15!UBERON:0000463;2.22e-09;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.12e-12,98;UBERON:0003061,3.12e-12,98;UBERON:0002193,7.66e-10,108;UBERON:0000178,2.15e-09,15;UBERON:0000179,2.15e-09,15;UBERON:0000463,2.15e-09,15;UBERON:0001474,9.22e-07,82 | |||
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| ||
|short_description=p2@C9orf78 | |short_description=p2@C9orf78 | ||
}} | }} |
Latest revision as of 23:35, 15 September 2015
Short description: | p2@C9orf78 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_C9orf78_5end |
Coexpression cluster: | C14_Whole_blood_Reticulocytes_liver_Neutrophils_Eosinophils_spleen |
Association with transcript: | 4bp_to_ENST00000461349_5end |
EntrezGene: | C9orf78 |
HGNC: | 24932 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 1.00e-30 | 168 |
hematopoietic oligopotent progenitor cell | 1.41e-28 | 161 |
hematopoietic multipotent progenitor cell | 1.41e-28 | 161 |
hematopoietic cell | 3.70e-28 | 177 |
myeloid cell | 1.06e-20 | 108 |
common myeloid progenitor | 1.06e-20 | 108 |
leukocyte | 4.62e-20 | 136 |
hematopoietic lineage restricted progenitor cell | 6.84e-16 | 120 |
nongranular leukocyte | 2.38e-15 | 115 |
myeloid leukocyte | 6.73e-10 | 72 |
myeloid lineage restricted progenitor cell | 1.02e-08 | 66 |
classical monocyte | 1.07e-08 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.07e-08 | 42 |
granulocyte monocyte progenitor cell | 8.63e-08 | 67 |
mesenchymal cell | 9.24e-08 | 354 |
T cell | 1.02e-07 | 25 |
pro-T cell | 1.02e-07 | 25 |
macrophage dendritic cell progenitor | 1.18e-07 | 61 |
lymphocyte | 1.26e-07 | 53 |
common lymphoid progenitor | 1.26e-07 | 53 |
lymphoid lineage restricted progenitor cell | 1.32e-07 | 52 |
monopoietic cell | 2.27e-07 | 59 |
monocyte | 2.27e-07 | 59 |
monoblast | 2.27e-07 | 59 |
promonocyte | 2.27e-07 | 59 |
defensive cell | 3.84e-07 | 48 |
phagocyte | 3.84e-07 | 48 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.12e-12 | 98 |
blood island | 3.12e-12 | 98 |
hemolymphoid system | 7.66e-10 | 108 |
blood | 2.15e-09 | 15 |
haemolymphatic fluid | 2.15e-09 | 15 |
organism substance | 2.15e-09 | 15 |
bone element | 9.22e-07 | 82 |
Ontology term | p-value | n |
---|---|---|
leukemia | 7.17e-13 | 39 |
hematologic cancer | 1.03e-12 | 51 |
immune system cancer | 1.03e-12 | 51 |
myeloid leukemia | 7.26e-11 | 31 |
cancer | 2.73e-07 | 235 |
disease of cellular proliferation | 3.21e-07 | 239 |