FFCP PHASE1:Hg19::chr2:101925055..101925174,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=284996 | |EntrezGene=284996 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23137 | |HGNC=23137 | ||
|TSSclassifier=strong | |||
|UniProt=Q8NC42,F8WCD0 | |UniProt=Q8NC42,F8WCD0 | ||
|association_with_transcript=0bp_to_ENST00000295317,ENST00000424632,uc002tax.1,uc002taz.1_5end | |association_with_transcript=0bp_to_ENST00000295317,ENST00000424632,uc002tax.1,uc002taz.1_5end | ||
|cluster_id=chr2:101925055..101925174,- | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_1_at_RNF149_5end | |description=CAGE_peak_1_at_RNF149_5end | ||
|id=chr2:101925055..101925174,- | |id=chr2:101925055..101925174,- | ||
|ontology_enrichment_celltype=CL:0000766!9.86e-30!76;CL:0000738!6.30e-27!140;CL:0000860!1.61e-26!45;CL:0002057!1.74e-26!42;CL:0000557!3.51e-26!71;CL:0002009!1.14e-25!65;CL:0002194!1.42e-24!63;CL:0000576!1.42e-24!63;CL:0000040!1.42e-24!63;CL:0000559!1.42e-24!63;CL:0002087!2.16e-22!119;CL:0000839!2.33e-22!70;CL:0002031!1.13e-21!124;CL:0000037!2.90e-12!172;CL:0000566!2.90e-12!172;CL:0000988!2.71e-11!182;CL:0002032!1.09e-10!165;CL:0000837!1.09e-10!165;CL:0000763!2.44e-09!112;CL:0000049!2.44e-09!112;CL:0000791!8.65e-09!18;CL:0000789!8.65e-09!18;CL:0002420!8.65e-09!18;CL:0002419!8.65e-09!18;CL:0000790!8.65e-09!18 | |ontology_enrichment_celltype=CL:0000766!9.86e-30!76;CL:0000738!6.30e-27!140;CL:0000860!1.61e-26!45;CL:0002057!1.74e-26!42;CL:0000557!3.51e-26!71;CL:0002009!1.14e-25!65;CL:0002194!1.42e-24!63;CL:0000576!1.42e-24!63;CL:0000040!1.42e-24!63;CL:0000559!1.42e-24!63;CL:0002087!2.16e-22!119;CL:0000839!2.33e-22!70;CL:0002031!1.13e-21!124;CL:0000037!2.90e-12!172;CL:0000566!2.90e-12!172;CL:0000988!2.71e-11!182;CL:0002032!1.09e-10!165;CL:0000837!1.09e-10!165;CL:0000763!2.44e-09!112;CL:0000049!2.44e-09!112;CL:0000791!8.65e-09!18;CL:0000789!8.65e-09!18;CL:0002420!8.65e-09!18;CL:0002419!8.65e-09!18;CL:0000790!8.65e-09!18 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.26e-19;33!CL:0002057;2.26e-19;33!CL:0000473;1.55e-17;39!CL:0000234;1.55e-17;39!CL:0000576;4.05e-15;48!CL:0000766;3.49e-13;69!CL:0000791;8.79e-09;18!CL:0000789;8.79e-09;18!CL:0002419;8.79e-09;18!CL:0002087;3.70e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,3.22e-30,72;CL:0000473,7.51e-28,48;CL:0000234,7.51e-28,48;CL:0000738,6.97e-27,136;CL:0000557,1.28e-26,67;CL:0000860,1.74e-26,42;CL:0002057,1.74e-26,42;CL:0002009,3.46e-26,61;CL:0002194,4.41e-25,59;CL:0000576,4.41e-25,59;CL:0000040,4.41e-25,59;CL:0000559,4.41e-25,59;CL:0000839,1.12e-22,66;CL:0002087,2.27e-22,115;CL:0002031,1.26e-21,120;CL:0000037,4.50e-12,168;CL:0000988,6.66e-11,177;CL:0002032,1.67e-10,161;CL:0000837,1.67e-10,161;CL:0000763,3.45e-09,108;CL:0000049,3.45e-09,108;CL:0000791,8.65e-09,18;CL:0000789,8.65e-09,18;CL:0002420,8.65e-09,18;CL:0002419,8.65e-09,18;CL:0000790,8.65e-09,18 | |||
|ontology_enrichment_development_v019=CL:0002057;3.42e-19;42!CL:0000790;8.79e-09;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!9.02e-29!102;UBERON:0003061!9.02e-29!102;UBERON:0002193!1.89e-27!112;UBERON:0002405!5.67e-22!115;UBERON:0002371!3.17e-21!80;UBERON:0001474!4.79e-18!86;UBERON:0003081!1.68e-17!216;UBERON:0004765!3.16e-14!101;UBERON:0001434!3.16e-14!101;UBERON:0000926!3.21e-10!448;UBERON:0004120!3.21e-10!448;UBERON:0006603!3.21e-10!448;UBERON:0000178!7.54e-08!15;UBERON:0000179!7.54e-08!15;UBERON:0000463!7.54e-08!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;7.31e-08;15!UBERON:0000179;7.31e-08;15!UBERON:0000463;7.31e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,5.94e-29,98;UBERON:0003061,5.94e-29,98;UBERON:0002193,1.53e-27,108;UBERON:0002371,2.10e-21,76;UBERON:0002405,5.24e-21,93;UBERON:0001474,4.22e-18,82;UBERON:0003081,3.62e-17,203;UBERON:0004765,1.88e-16,90;UBERON:0001434,2.42e-13,100;UBERON:0000926,1.95e-10,315;UBERON:0004120,1.95e-10,315;UBERON:0006603,1.95e-10,315;UBERON:0000178,7.54e-08,15;UBERON:0000179,7.54e-08,15;UBERON:0000463,7.54e-08,15 | |||
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| ||
|short_description=p1@RNF149 | |short_description=p1@RNF149 | ||
}} | }} |
Latest revision as of 23:53, 15 September 2015
Short description: | p1@RNF149 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RNF149_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 0bp_to_ENST00000295317, ENST00000424632, uc002tax.1, uc002taz.1_5end |
EntrezGene: | RNF149 |
HGNC: | 23137 |
UniProt: | Q8NC42F8WCD0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 3.22e-30 | 72 |
defensive cell | 7.51e-28 | 48 |
phagocyte | 7.51e-28 | 48 |
leukocyte | 6.97e-27 | 136 |
granulocyte monocyte progenitor cell | 1.28e-26 | 67 |
classical monocyte | 1.74e-26 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.74e-26 | 42 |
macrophage dendritic cell progenitor | 3.46e-26 | 61 |
monopoietic cell | 4.41e-25 | 59 |
monocyte | 4.41e-25 | 59 |
monoblast | 4.41e-25 | 59 |
promonocyte | 4.41e-25 | 59 |
myeloid lineage restricted progenitor cell | 1.12e-22 | 66 |
nongranular leukocyte | 2.27e-22 | 115 |
hematopoietic lineage restricted progenitor cell | 1.26e-21 | 120 |
hematopoietic stem cell | 4.50e-12 | 168 |
hematopoietic cell | 6.66e-11 | 177 |
hematopoietic oligopotent progenitor cell | 1.67e-10 | 161 |
hematopoietic multipotent progenitor cell | 1.67e-10 | 161 |
myeloid cell | 3.45e-09 | 108 |
common myeloid progenitor | 3.45e-09 | 108 |
mature alpha-beta T cell | 8.65e-09 | 18 |
alpha-beta T cell | 8.65e-09 | 18 |
immature T cell | 8.65e-09 | 18 |
mature T cell | 8.65e-09 | 18 |
immature alpha-beta T cell | 8.65e-09 | 18 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 5.94e-29 | 98 |
blood island | 5.94e-29 | 98 |
hemolymphoid system | 1.53e-27 | 108 |
bone marrow | 2.10e-21 | 76 |
immune system | 5.24e-21 | 93 |
bone element | 4.22e-18 | 82 |
lateral plate mesoderm | 3.62e-17 | 203 |
skeletal element | 1.88e-16 | 90 |
skeletal system | 2.42e-13 | 100 |
mesoderm | 1.95e-10 | 315 |
mesoderm-derived structure | 1.95e-10 | 315 |
presumptive mesoderm | 1.95e-10 | 315 |
blood | 7.54e-08 | 15 |
haemolymphatic fluid | 7.54e-08 | 15 |
organism substance | 7.54e-08 | 15 |