FFCP PHASE1:Hg19::chr17:4852725..4852751,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr17:4852725..4852751,- to FFCP PHASE1:Hg19::chr17:4852725..4852751,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5216 | |EntrezGene=5216 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8881 | |HGNC=8881 | ||
|TSSclassifier=strong | |||
|UniProt=P07737 | |UniProt=P07737 | ||
|association_with_transcript=-416bp_to_ENST00000225655_5end | |||
|cluster_id=chr17:4852725..4852751,- | |||
|description=CAGE_peak_7_at_PFN1_5end | |||
|id=chr17:4852725..4852751,- | |||
|ontology_enrichment_celltype=CL:0000738!2.62e-37!140;CL:0000988!3.11e-35!182;CL:0000037!2.78e-34!172;CL:0000566!2.78e-34!172;CL:0002032!6.46e-32!165;CL:0000837!6.46e-32!165;CL:0002087!1.02e-28!119;CL:0002031!9.61e-27!124;CL:0000766!7.54e-26!76;CL:0000763!7.20e-24!112;CL:0000049!7.20e-24!112;CL:0002009!6.98e-22!65;CL:0000860!2.12e-21!45;CL:0000557!3.16e-21!71;CL:0002194!7.50e-21!63;CL:0000576!7.50e-21!63;CL:0000040!7.50e-21!63;CL:0000559!7.50e-21!63;CL:0002057!3.36e-20!42;CL:0000839!1.45e-19!70;CL:0000542!1.12e-07!53;CL:0000051!1.12e-07!53;CL:0000134!2.95e-07!358;CL:0000838!3.30e-07!52;CL:0000219!7.39e-07!390;CL:0002320!8.44e-07!365;CL:0000451!9.13e-07!10;CL:0000094!9.67e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.94e-28;33!CL:0002057;1.94e-28;33!CL:0000473;2.20e-20;39!CL:0000234;2.20e-20;39!CL:0000576;7.75e-18;48!CL:0000766;6.73e-14;69!CL:0002087;3.06e-13;104!CL:0000738;1.74e-12;136!CL:0000094;8.85e-11;8!CL:0000081;1.85e-10;11!CL:0000945;6.04e-10;24!CL:0000542;1.03e-08;53!CL:0000763;1.43e-08;100!CL:0000623;1.06e-07;3!CL:0000988;2.04e-07;177!CL:0000771;9.48e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.37e-49,136;CL:0000988,3.47e-49,177;CL:0000037,4.10e-45,168;CL:0002032,1.62e-42,161;CL:0000837,1.62e-42,161;CL:0002087,2.27e-41,115;CL:0002031,1.04e-33,120;CL:0000860,1.13e-30,42;CL:0002057,1.13e-30,42;CL:0000766,7.38e-30,72;CL:0000473,3.95e-28,48;CL:0000234,3.95e-28,48;CL:0000763,1.63e-26,108;CL:0000049,1.63e-26,108;CL:0002194,1.35e-24,59;CL:0000576,1.35e-24,59;CL:0000040,1.35e-24,59;CL:0000559,1.35e-24,59;CL:0002009,1.53e-23,61;CL:0000839,3.47e-21,66;CL:0000557,9.30e-21,67;CL:0000134,1.20e-16,354;CL:0002320,5.37e-16,361;CL:0000219,1.82e-14,386;CL:0000542,2.61e-14,53;CL:0000051,2.61e-14,53;CL:0000838,4.44e-13,52;CL:0000723,7.82e-12,433;CL:0000048,1.32e-11,427;CL:0000034,2.61e-11,441;CL:0000094,8.74e-11,8;CL:0000081,1.84e-10,11;CL:0000945,6.49e-10,24;CL:0000826,6.49e-10,24;CL:0000623,8.37e-08,3;CL:0000825,8.37e-08,3;CL:0000771,9.43e-07,2 | |||
|ontology_enrichment_development_v019=CL:0002057;2.97e-21;42!CL:0000049;8.80e-09;108!CL:0000051;1.03e-08;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060058;2.28e-08;10 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,1.07e-08,51;DOID:0060083,1.07e-08,51;DOID:0060058,2.24e-08,10 | |||
|ontology_enrichment_uberon=UBERON:0002390!2.71e-19!102;UBERON:0003061!2.71e-19!102;UBERON:0002371!1.82e-18!80;UBERON:0002193!3.98e-18!112;UBERON:0001474!5.94e-16!86;UBERON:0002405!1.66e-15!115;UBERON:0004765!4.19e-13!101;UBERON:0001434!4.19e-13!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.35e-22,98;UBERON:0003061,2.35e-22,98;UBERON:0002193,9.74e-21,108;UBERON:0002371,8.34e-19,76;UBERON:0002405,8.50e-18,93;UBERON:0001474,7.28e-17,82;UBERON:0002384,4.12e-15,371;UBERON:0004765,1.09e-14,90;UBERON:0001434,1.80e-12,100;UBERON:0003081,1.54e-08,203 | |||
|phase1_expression=0,0.214100523890983,0.140954404095971,0,0,0,0,0,0,0,4.18680700783456,0.218441372130172,0,0.123766352960047,0.331397375727916,0,0.602694528023977,0.730310090387373,0.487932798790507,0.123121058076788,0,0,0,0.273748850145768,0.125542639594803,4.20273731613732,7.30695246104517,5.98201937983962,1.18009283054671,1.15148819429164,0.77408061658038,0,0.6024118375565,0,1.16200800870452,0.710846162437108,0.293600439334847,1.66198622559563,3.81034450193269,1.30206522429511,0.447830948479849,0.32389366601898,0.257575567634187,1.89017710413434,2.64513160582167,1.94067248950253,4.18372266430232,2.05583944010913,2.16794459626573,0.28769239232215,0.256160706529101,0.236482229888585,0.344745680736619,0.645484683583826,1.35426486594342,3.01187743268168,2.45615535052061,1.57306439111559,4.28517449319264,3.20929027076094,2.55734850319616,0.659702600373432,0.598390972864896,1.70489900213078,5.22376629531451,4.53908179752912,2.4912889959823,1.00499466102697,1.0429658368404,0.217188844705117,3.63239701580021,3.68277635987565,2.84816148696796,0.422510572623884,0.425208599930087,0.628975936525128,0.336985893439485,0.450530678524519,0,0,0.19891667719909,0.182664153764634,0,0.546138611262131,0,3.84057200309856,0,0.574752439954483,0,0,0.569212969109448,0,0.382273228125229,0,0.560508562981536,0,0,0.393010762749165,0.411202997999018,0.668745981562712,0,0.473447805734733,0,1.22551502573691,0.294605907474837,0.443067789167242,0.812411591295047,1.40900451698243,0.910415432919148,0.164437904603676,0.829050053357545,0.579606171470105,0.14828656316206,0,0,0.906474741580529,0,0.34362744548263,0.506039384039006,0,0,0,0.150575119077773,0,0,0,0.821127996921047,0.604820229674197,1.06976078313403,0.144824403882799,0,0,0,0.722878304769133,0,0,0,0,0,0,0,0.0654895377488563,0,0,0.324547393654683,0.696518949197069,0.398873881556595,1.19245312152671,0.571994910780128,1.48583000531826,0,0,0,0,0,0.275118041940067,0,0,0,0.33472061276467,0,0.760272105718513,0.488124115096339,0,0,0.0892997282840798,0,0,0,0,0,9.22462922052443,7.75560528296651,0,0.496971951695318,0.12663051166458,0.132409180813219,0,0,0,1.06748995729705,0.24666754841716,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0.122834317311768,0,0,0,0,1.43723628363248,0,0,0,0,0.30648779579902,0.150238058906597,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0.355009592516614,0.201504196455281,0,0.57978255948989,0.545492241181669,0.573609190778008,0.243947412259191,0.662648841607426,0.232387885739037,0,0.756962552626885,0.36497735907583,0,0.643240938192885,0,0,0,0.946454400318751,0.505754070234305,0.964044119533928,1.43382164552112,0.435758888184812,0.71181185733329,0.943819157121151,0.784885860501384,0.38474715694639,0,0,0,0,0,1.96565443335525,0,0,0,0,0.109750285408626,1.1240175325762,0,0.0925884451585296,0,0,0,0.115930404975077,0,0.144366447761074,0,0.190254152234598,0,0,0,0,0.148631162288728,0,0.503946384596579,0,0.0895585227028483,0,0,0,0.352193736052904,0.207328115540772,0.288239906833923,0.25248486685276,0,0,0,1.71072446022705,0,0,0.285826432630578,0,0,0,0.258543431515556,0,0,0,0,0.257207374262142,0,0,0.142977993658148,0,0,0,0,0,0.602878754119172,0,0,1.2162378064119,0,0,0,0,0,0,0.205476322550383,0.358121926479791,1.12085143993527,1.37921532141349,2.37190332345469,1.41177339907723,0,0,0,0,0,0.749007023947182,2.99161459204025,1.65766205374414,0,0,0,0,0.356857977594324,0.157702415033935,0.117141414992713,0,0,0,0,0,0,0,0,0.413536052245775,1.50999940573032,1.28073069364133,0.303127571446259,0,0,0,0,0,0,0,0.160853921143607,0,0,0,0.0821271560138091,0,0.116210378459959,0,0.40101294060657,0,0.114814448164607,0.182091168006717,0,0,0.0770153371044148,0,0,0.316654886678627,0,0.170093705276516,0,0,0.270946437543853,1.00337954770971,0,0,0,0,0,0,0,0,0,0,0.165018999841176,0,0.650060246036521,0,0.290012154876366,0,0.15350367472613,0,0.107420244868274,0,0.0852266274161009,0,0,0.576570202095319,0.127612712494584,0.10115778085555,0,0,0.6970372701606,0.308033580176089,0,1.73986598415015,0.18532421910392,0,0,0,0,0,0,0,0,0,0,0,0,0,0.842516912477962,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0.405820753925408,0,0.281695602532241,0,0.0982490410131212,0.35667105148125,0,0,0,0,0,0.0962221127255121,0,1.08890984861323,0.0941438007767792,0,0,0,0,0,0,0.569647187174163,0,0,0,0,0,0.106824071127473,0,0.245040215981032,2.22963810150862,0,0.782560276832555,0,0,0.191505370132367,0.423347165447766,0,0,0.228234679033192,0,0,0,0.481764225311099,0.605399121573143,1.27753871307098,1.03051603426729,0.614481528616916,1.11838053946208,0.500547425135725,0.19538809540204,0.278406173895242,0,0,1.33228787199128,1.4098700508785,0.18714054040822,0.146508179271894,0,4.68062213965409,0,0,0,0,0,0.140669416410513,0.222617410045812,0,0,0,0.276283915531148,0,0.409074730008619,1.35393286007176,0,0.359473404589307,0.179021174675609,1.02314474045374,0,0,0,0,0,0,0.260427761085233,0.0874599999961957,0,0.1137934482855,0,0,0.344743373241465,0,0,0,0.120596438625408,0,0,0,0.219385397153973,0.10893846351899,0.139423744278603,0.153900517007594,0.113942055847001,0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| 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| ||
|short_description=p7@PFN1 | |||
}} | }} |
Latest revision as of 02:31, 16 September 2015
Short description: | p7@PFN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_PFN1_5end |
Coexpression cluster: | NA |
Association with transcript: | -416bp_to_ENST00000225655_5end |
EntrezGene: | PFN1 |
HGNC: | 8881 |
UniProt: | P07737 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.35e-22 | 98 |
blood island | 2.35e-22 | 98 |
hemolymphoid system | 9.74e-21 | 108 |
bone marrow | 8.34e-19 | 76 |
immune system | 8.50e-18 | 93 |
bone element | 7.28e-17 | 82 |
connective tissue | 4.12e-15 | 371 |
skeletal element | 1.09e-14 | 90 |
skeletal system | 1.80e-12 | 100 |
lateral plate mesoderm | 1.54e-08 | 203 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 1.07e-08 | 51 |
immune system cancer | 1.07e-08 | 51 |
lymphoma | 2.24e-08 | 10 |