FFCP PHASE1:Hg19::chr5:149340440..149340451,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1836 | |EntrezGene=1836 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10994 | |HGNC=10994 | ||
|TSSclassifier=strong | |||
|UniProt=C9JAN6 | |UniProt=C9JAN6 | ||
|association_with_transcript=92bp_to_ENST00000433184_5end | |association_with_transcript=92bp_to_ENST00000433184_5end | ||
|cluster_id=chr5:149340440..149340451,+ | |||
|description=CAGE_peak_4_at_SLC26A2_5end | |description=CAGE_peak_4_at_SLC26A2_5end | ||
|id=chr5:149340440..149340451,+ | |id=chr5:149340440..149340451,+ | ||
|ontology_enrichment_celltype=CL:0000066!3.04e-11!254;CL:0002076!6.24e-10!43;CL:0000223!6.89e-08!59 | |ontology_enrichment_celltype=CL:0000066!3.04e-11!254;CL:0002076!6.24e-10!43;CL:0000223!6.89e-08!59 | ||
|ontology_enrichment_celltype_v019=CL:0000860;4.28e-12;33!CL:0002057;4.28e-12;33!CL:0002251;9.67e-10;20!CL:0002076;5.62e-09;42!CL:0000473;2.62e-08;39!CL:0000234;2.62e-08;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,1.30e-11,42;CL:0000860,7.49e-10,42;CL:0002057,7.49e-10,42;CL:0002251,1.07e-09,20;CL:0000223,1.59e-09,58;CL:0000473,9.13e-08,48;CL:0000234,9.13e-08,48;CL:0000557,2.41e-07,67 | |||
|ontology_enrichment_development_v019=CL:0002057;1.45e-07;42 | |||
|ontology_enrichment_disease=DOID:305!8.36e-09!106;DOID:0050687!4.61e-07!143 | |ontology_enrichment_disease=DOID:305!8.36e-09!106;DOID:0050687!4.61e-07!143 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!2.22e-11!169;UBERON:0000925!2.22e-11!169;UBERON:0006595!2.22e-11!169;UBERON:0000062!3.22e-10!511;UBERON:0004921!3.41e-10!129;UBERON:0004185!3.41e-10!129;UBERON:0000468!4.69e-10!659;UBERON:0001007!6.54e-10!155;UBERON:0001555!6.54e-10!155;UBERON:0007026!6.54e-10!155;UBERON:0000922!1.17e-08!612;UBERON:0002050!2.14e-08!605;UBERON:0005423!2.14e-08!605;UBERON:0000923!4.21e-08!604;UBERON:0005291!4.21e-08!604;UBERON:0006598!4.21e-08!604;UBERON:0002532!4.21e-08!604;UBERON:0000077!2.37e-07!130;UBERON:0001004!2.71e-07!72;UBERON:0000467!3.95e-07!625;UBERON:0000480!4.25e-07!626 | |ontology_enrichment_uberon=UBERON:0004119!2.22e-11!169;UBERON:0000925!2.22e-11!169;UBERON:0006595!2.22e-11!169;UBERON:0000062!3.22e-10!511;UBERON:0004921!3.41e-10!129;UBERON:0004185!3.41e-10!129;UBERON:0000468!4.69e-10!659;UBERON:0001007!6.54e-10!155;UBERON:0001555!6.54e-10!155;UBERON:0007026!6.54e-10!155;UBERON:0000922!1.17e-08!612;UBERON:0002050!2.14e-08!605;UBERON:0005423!2.14e-08!605;UBERON:0000923!4.21e-08!604;UBERON:0005291!4.21e-08!604;UBERON:0006598!4.21e-08!604;UBERON:0002532!4.21e-08!604;UBERON:0000077!2.37e-07!130;UBERON:0001004!2.71e-07!72;UBERON:0000467!3.95e-07!625;UBERON:0000480!4.25e-07!626 | ||
|ontology_enrichment_uberon_v019=UBERON:0004921;4.44e-11;33!UBERON:0000160;1.30e-08;17!UBERON:0005409;5.43e-08;22!UBERON:0000059;4.40e-07;11!UBERON:0004907;5.69e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,7.03e-11,160;UBERON:0000925,7.03e-11,160;UBERON:0006595,7.03e-11,160;UBERON:0000922,1.20e-10,592;UBERON:0005423,2.44e-10,581;UBERON:0002050,4.02e-10,564;UBERON:0004921,4.20e-10,118;UBERON:0001007,2.31e-09,145;UBERON:0001555,2.31e-09,145;UBERON:0007026,2.31e-09,145;UBERON:0000923,5.24e-09,560;UBERON:0010316,5.24e-09,560;UBERON:0005291,5.24e-09,560;UBERON:0006598,5.24e-09,560;UBERON:0010317,5.24e-09,560;UBERON:0002532,5.24e-09,560;UBERON:0000160,1.39e-08,17;UBERON:0000059,4.33e-07,11;UBERON:0004907,6.26e-07,5 | |||
|phase1_expression=0.363356758541113,0,0.140954404095971,0,0,0,0,0,0,0.245733936501509,0,0.218441372130172,0.791300934685361,0.123766352960047,0,0,0,0,0.487932798790507,0.123121058076788,0.204000691244253,0.313454721478088,0.572471974262113,0.410623275218653,0.251085279189606,0.229240217243854,0.164201178899891,0.0787107813136792,0,0,0.154816123316076,1.83884244895785,0.6024118375565,0.739508020333575,0,0,0.293600439334847,0.553995408531877,1.20326668482085,0.217010870715852,0.223915474239924,0,0,0.726991193897824,0.377875943688809,1.69808842831471,3.25400651667958,6.98985409637104,8.6717783850629,2.3015391385772,1.7931249457037,3.07426898855161,5.17118521104928,2.5819387343353,6.77132432971709,5.27078550719293,3.547779950752,5.16864014223695,3.67300670845083,4.8139354061414,10.2293940127847,0,0.598390972864896,0.426224750532694,1.45104619314292,0.56738522469114,1.86846674698672,3.01498398308092,3.12889751052121,2.38907729175628,0,0.368277635987565,1.26584954976354,0.211255286311942,0.212604299965044,0,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0.196709770113833,0,0,0,0.32592226663359,0.473447805734733,0,0,0,0,0.541607727530031,0,0.260118695119756,0,0,0,0,0,0,0.113309342697566,0,0,0,0.318565414324097,0,0,0,0.127986611154418,0,0.236777252044017,0,0.201606743224732,0,0.144824403882799,0,0,0.255725123687061,0.722878304769133,0,0.144846518960824,0.795285947051099,1.45990461090791,0.189069634328136,1.55210578223795,0.87834785693126,0.458426764241994,0,0.370784442784429,0,0,0.531831842075461,0,0,0,0.39752481473341,0,0,0,0.838998872419812,0.550236083880135,0.417989933073621,0.775250277507987,0.71153252537342,0.66944122552934,0,0.760272105718513,0.732186172644509,0,0,0.803697554556718,0.22452937262617,0.675668882899933,0,0,0.366403487860815,0,0,0,0,0.886413581652058,0.926864265692532,0,0,1.12135520028461,1.06748995729705,2.4666754841716,0,0.67355336034844,0.653847612453835,0.605429710579726,0.576175924479999,0,0,0,0,0.469737994575059,0.161872944368132,0,0,0.491337269247072,0,0,0,0,0,0.336672227908132,0.125118519871964,0.277064115484183,0.438977620880838,0,0.150238058906597,0.567160915800105,0.179389635688862,0.213557388818567,0,0,0.309157587715317,0.257640540045629,0,0.337552664482532,0.194874010322397,0.252433774244115,0.184099797284599,0.484938170456436,0,0.201504196455281,0.169560592310488,0.966304265816484,1.36373060295417,2.00763216772303,0,0.132529768321485,0.69716365721711,0.10366105501537,0.504641701751257,0.36497735907583,0,0,0,0,0.721879481669586,1.41968160047813,1.01150814046861,0.964044119533928,0.882351781859152,0.435758888184812,1.18635309555548,1.21348177344148,0.588664395376038,0.38474715694639,0,0,0,1.47008711385542,1.26755034821831,0,0,0,3.44367627920718,0.343135620597051,1.09750285408626,0,0.201057944823262,1.574003567695,0,0,0,0,2.11335649624479,0.721832238805369,0.462985512576611,0.570762456703795,1.58040879591855,0,0.246217006087397,0,0.148631162288728,0.93733833986777,4.87148171776693,1.70130116690864,2.4180801129769,1.16253575405585,1.91691339582606,3.4486426652716,0.264145302039678,4.14656231081544,3.747118788841,3.02981840223312,0.253991577168676,0.381988425558278,0,1.71072446022705,0.205654985406647,0.600686115687835,1.14330573052231,0.112131084345361,0.43596006883328,0.36669142910475,1.42198887333556,0,0.845302752556,0.531876233169741,0,0.257207374262142,0,0.266422179016099,0.142977993658148,3.7983512377401,0,0.65147236858747,0,0,0,1.74306691720059,0.399891964728228,0,0,0,0,1.14861935834114,0,0.579125226670317,0.61642896765115,1.25342674267927,0.224170287987055,0.197030760201927,0.215627574859517,0.128343036279748,0.254094624222463,0,0,0.167516265334349,0,0,0,0,0.24538298343828,1.00034104211935,0,0.415941723061614,0.892144943985809,0.630809660135739,0.234282829985426,0,0,1.03473071292505,0,0.184369168541703,0.173767228936166,0.195801157462741,0,0,0.431428401637234,0.213455115606889,0.303127571446259,1.66435439510497,0.30239029332968,0.744323423456331,2.455391572609,0.841980283299221,0.512556597022804,1.53512174720011,1.12597744800525,0,0.771048469013278,0.355123450626254,0.246381468041427,0.519254429183621,0.232420756919918,2.65890789101569,4.21063587636898,0.368323955743585,0.114814448164607,0,0,0.902399225814824,0.616122696835318,1.56869953835371,0,1.16106791782163,0,0.680374821106063,1.94324324491925,0,0.541892875087706,0,1.52925763827023,0,1.56712328305525,0.438519753291869,0.261435451024901,0,0,0,1.75169719801128,0,0,0.574265537996172,0.650060246036521,0,0,0.154048617114644,0.307007349452259,0.275673144969061,0.429680979473094,0.145016693914229,0.255679882248303,0,1.15699440752685,1.34533047155574,1.78657797492418,0.2023155617111,0,0.62962469366128,0,0,0,0,0,1.43124886741991,0.744316738719335,0.632758849437452,0.762520775695299,0.255897791311334,0,0,0,0,0.54907405947211,0.706874414074119,0.404364963146632,0,0,0,0.243713489631284,0,0.136499911407986,0.141405431953713,1.13008116620243,0,0.66343897524122,0.438450885253763,0,0,0.405820753925408,0,0.2816956025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| ||
|short_description=p4@SLC26A2 | |short_description=p4@SLC26A2 | ||
}} | }} |
Latest revision as of 02:33, 16 September 2015
Short description: | p4@SLC26A2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SLC26A2_5end |
Coexpression cluster: | NA |
Association with transcript: | 92bp_to_ENST00000433184_5end |
EntrezGene: | SLC26A2 |
HGNC: | 10994 |
UniProt: | C9JAN6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 1.30e-11 | 42 |
classical monocyte | 7.49e-10 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.49e-10 | 42 |
epithelial cell of alimentary canal | 1.07e-09 | 20 |
endodermal cell | 1.59e-09 | 58 |
defensive cell | 9.13e-08 | 48 |
phagocyte | 9.13e-08 | 48 |
granulocyte monocyte progenitor cell | 2.41e-07 | 67 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 7.03e-11 | 160 |
endoderm | 7.03e-11 | 160 |
presumptive endoderm | 7.03e-11 | 160 |
embryo | 1.20e-10 | 592 |
developing anatomical structure | 2.44e-10 | 581 |
embryonic structure | 4.02e-10 | 564 |
subdivision of digestive tract | 4.20e-10 | 118 |
digestive system | 2.31e-09 | 145 |
digestive tract | 2.31e-09 | 145 |
primitive gut | 2.31e-09 | 145 |
germ layer | 5.24e-09 | 560 |
germ layer / neural crest | 5.24e-09 | 560 |
embryonic tissue | 5.24e-09 | 560 |
presumptive structure | 5.24e-09 | 560 |
germ layer / neural crest derived structure | 5.24e-09 | 560 |
epiblast (generic) | 5.24e-09 | 560 |
intestine | 1.39e-08 | 17 |
large intestine | 4.33e-07 | 11 |
lower digestive tract | 6.26e-07 | 5 |