FFCP PHASE1:Hg19::chr12:10871020..10871032,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8531 | |EntrezGene=8531 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2428 | |HGNC=2428 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000539204_5end | |association_with_transcript=0bp_to_ENST00000539204_5end | ||
|cluster_id=chr12:10871020..10871032,- | |||
|coexpression_cluster_id=C72 | |coexpression_cluster_id=C72 | ||
|description=CAGE_peak_26_at_CSDA_5end | |description=CAGE_peak_26_at_CSDA_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0008814;8.10e-26;2!UBERON:0010056;8.10e-26;2!UBERON:0003104;3.37e-07;31 | |ontology_enrichment_development_v019=UBERON:0008814;8.10e-26;2!UBERON:0010056;8.10e-26;2!UBERON:0003104;3.37e-07;31 | ||
|ontology_enrichment_disease=DOID:3371!6.08e-07!1;DOID:4549!6.08e-07!1;DOID:5861!6.08e-07!1;DOID:6496!6.08e-07!1 | |ontology_enrichment_disease=DOID:3371!6.08e-07!1;DOID:4549!6.08e-07!1;DOID:5861!6.08e-07!1;DOID:6496!6.08e-07!1 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001630!1.73e-12!2;UBERON:0005090!1.73e-12!2;UBERON:0003127!1.00e-11!2;UBERON:0003126!1.45e-07!7;UBERON:0001005!1.45e-07!7;UBERON:0005418!4.33e-07!1;UBERON:0001389!4.33e-07!1;UBERON:0000026!4.33e-07!1;UBERON:0008784!4.33e-07!1;UBERON:0006058!4.33e-07!1;UBERON:0003663!4.33e-07!1;UBERON:0001383!4.33e-07!1;UBERON:0004256!4.33e-07!1;UBERON:0002529!4.33e-07!1;UBERON:0004708!4.33e-07!1;UBERON:0002101!4.33e-07!1;UBERON:0004709!4.33e-07!1;UBERON:0003661!4.33e-07!1;UBERON:0002471!4.33e-07!1;UBERON:0004357!4.33e-07!1;UBERON:0009872!4.33e-07!1;UBERON:0004347!4.33e-07!1;UBERON:0005420!4.33e-07!1;UBERON:0005732!4.33e-07!1;UBERON:0006057!4.33e-07!1;UBERON:0000978!4.33e-07!1;UBERON:0002103!4.33e-07!1;UBERON:0001665!4.33e-07!1;UBERON:0003823!4.33e-07!1;UBERON:0000154!4.33e-07!1;UBERON:0005733!4.33e-07!1;UBERON:0005730!4.33e-07!1;UBERON:0002426!4.58e-07!1;UBERON:0003831!4.58e-07!1;UBERON:0003898!4.58e-07!1;UBERON:0004830!4.58e-07!1;UBERON:0001774!4.58e-07!1;UBERON:0003830!4.58e-07!1;UBERON:0005175!4.58e-07!1;UBERON:0003897!4.58e-07!1;UBERON:0001103!4.58e-07!1;UBERON:0010084!4.58e-07!1;UBERON:0005705!6.43e-07!1;UBERON:0008193!6.43e-07!1;UBERON:0002514!6.43e-07!1;UBERON:0003462!6.43e-07!1;UBERON:0008001!6.43e-07!1;UBERON:0007914!6.43e-07!1;UBERON:0003457!6.43e-07!1;UBERON:0009292!6.43e-07!1;UBERON:0007375!6.43e-07!1;UBERON:0003323!6.43e-07!1;UBERON:0002397!6.43e-07!1;UBERON:0001709!6.43e-07!1;UBERON:0004066!6.43e-07!1;UBERON:0002244!6.43e-07!1;UBERON:0005620!6.43e-07!1;UBERON:0004068!6.43e-07!1;UBERON:0004362!6.43e-07!1;UBERON:0001301!6.80e-07!1 | |ontology_enrichment_uberon=UBERON:0001630!1.73e-12!2;UBERON:0005090!1.73e-12!2;UBERON:0003127!1.00e-11!2;UBERON:0003126!1.45e-07!7;UBERON:0001005!1.45e-07!7;UBERON:0005418!4.33e-07!1;UBERON:0001389!4.33e-07!1;UBERON:0000026!4.33e-07!1;UBERON:0008784!4.33e-07!1;UBERON:0006058!4.33e-07!1;UBERON:0003663!4.33e-07!1;UBERON:0001383!4.33e-07!1;UBERON:0004256!4.33e-07!1;UBERON:0002529!4.33e-07!1;UBERON:0004708!4.33e-07!1;UBERON:0002101!4.33e-07!1;UBERON:0004709!4.33e-07!1;UBERON:0003661!4.33e-07!1;UBERON:0002471!4.33e-07!1;UBERON:0004357!4.33e-07!1;UBERON:0009872!4.33e-07!1;UBERON:0004347!4.33e-07!1;UBERON:0005420!4.33e-07!1;UBERON:0005732!4.33e-07!1;UBERON:0006057!4.33e-07!1;UBERON:0000978!4.33e-07!1;UBERON:0002103!4.33e-07!1;UBERON:0001665!4.33e-07!1;UBERON:0003823!4.33e-07!1;UBERON:0000154!4.33e-07!1;UBERON:0005733!4.33e-07!1;UBERON:0005730!4.33e-07!1;UBERON:0002426!4.58e-07!1;UBERON:0003831!4.58e-07!1;UBERON:0003898!4.58e-07!1;UBERON:0004830!4.58e-07!1;UBERON:0001774!4.58e-07!1;UBERON:0003830!4.58e-07!1;UBERON:0005175!4.58e-07!1;UBERON:0003897!4.58e-07!1;UBERON:0001103!4.58e-07!1;UBERON:0010084!4.58e-07!1;UBERON:0005705!6.43e-07!1;UBERON:0008193!6.43e-07!1;UBERON:0002514!6.43e-07!1;UBERON:0003462!6.43e-07!1;UBERON:0008001!6.43e-07!1;UBERON:0007914!6.43e-07!1;UBERON:0003457!6.43e-07!1;UBERON:0009292!6.43e-07!1;UBERON:0007375!6.43e-07!1;UBERON:0003323!6.43e-07!1;UBERON:0002397!6.43e-07!1;UBERON:0001709!6.43e-07!1;UBERON:0004066!6.43e-07!1;UBERON:0002244!6.43e-07!1;UBERON:0005620!6.43e-07!1;UBERON:0004068!6.43e-07!1;UBERON:0004362!6.43e-07!1;UBERON:0001301!6.80e-07!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0005090;1.99e-98;2!UBERON:0001630;1.99e-98;2!UBERON:0001389;2.42e-50;1!UBERON:0000026;2.42e-50;1!UBERON:0008784;2.42e-50;1!UBERON:0006058;2.42e-50;1!UBERON:0003663;2.42e-50;1!UBERON:0004256;2.42e-50;1!UBERON:0004708;2.42e-50;1!UBERON:0002101;2.42e-50;1!UBERON:0004709;2.42e-50;1!UBERON:0002529;2.42e-50;1!UBERON:0010538;2.42e-50;1!UBERON:0003661;2.42e-50;1!UBERON:0010890;2.42e-50;1!UBERON:0002471;2.42e-50;1!UBERON:0001383;2.42e-50;1!UBERON:0010758;2.42e-50;1!UBERON:0010707;2.42e-50;1!UBERON:0000978;2.42e-50;1!UBERON:0002103;2.42e-50;1!UBERON:0001665;2.42e-50;1!UBERON:0003823;2.42e-50;1!UBERON:0000154;2.42e-50;1!UBERON:0010709;2.42e-50;1!UBERON:0002426;5.12e-50;1!UBERON:0003831;5.12e-50;1!UBERON:0003898;5.12e-50;1!UBERON:0004830;5.12e-50;1!UBERON:0003830;5.12e-50;1!UBERON:0005175;5.12e-50;1!UBERON:0001774;5.12e-50;1!UBERON:0001103;5.12e-50;1!UBERON:0001134;1.29e-28;16!UBERON:0002036;1.29e-28;16!UBERON:0001723;1.03e-17;3!UBERON:0001033;1.03e-17;3!UBERON:0002385;9.35e-16;31!UBERON:0001015;9.35e-16;31!UBERON:0000383;9.35e-16;31 | |ontology_enrichment_uberon_v019=UBERON:0005090;1.99e-98;2!UBERON:0001630;1.99e-98;2!UBERON:0001389;2.42e-50;1!UBERON:0000026;2.42e-50;1!UBERON:0008784;2.42e-50;1!UBERON:0006058;2.42e-50;1!UBERON:0003663;2.42e-50;1!UBERON:0004256;2.42e-50;1!UBERON:0004708;2.42e-50;1!UBERON:0002101;2.42e-50;1!UBERON:0004709;2.42e-50;1!UBERON:0002529;2.42e-50;1!UBERON:0010538;2.42e-50;1!UBERON:0003661;2.42e-50;1!UBERON:0010890;2.42e-50;1!UBERON:0002471;2.42e-50;1!UBERON:0001383;2.42e-50;1!UBERON:0010758;2.42e-50;1!UBERON:0010707;2.42e-50;1!UBERON:0000978;2.42e-50;1!UBERON:0002103;2.42e-50;1!UBERON:0001665;2.42e-50;1!UBERON:0003823;2.42e-50;1!UBERON:0000154;2.42e-50;1!UBERON:0010709;2.42e-50;1!UBERON:0002426;5.12e-50;1!UBERON:0003831;5.12e-50;1!UBERON:0003898;5.12e-50;1!UBERON:0004830;5.12e-50;1!UBERON:0003830;5.12e-50;1!UBERON:0005175;5.12e-50;1!UBERON:0001774;5.12e-50;1!UBERON:0001103;5.12e-50;1!UBERON:0001134;1.29e-28;16!UBERON:0002036;1.29e-28;16!UBERON:0001723;1.03e-17;3!UBERON:0001033;1.03e-17;3!UBERON:0002385;9.35e-16;31!UBERON:0001015;9.35e-16;31!UBERON:0000383;9.35e-16;31 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0005090,1.55e-98,2;UBERON:0001630,1.55e-98,2;UBERON:0005418,2.42e-50,1;UBERON:0001389,2.42e-50,1;UBERON:0000026,2.42e-50,1;UBERON:0008784,2.42e-50,1;UBERON:0006058,2.42e-50,1;UBERON:0003663,2.42e-50,1;UBERON:0004256,2.42e-50,1;UBERON:0004708,2.42e-50,1;UBERON:0002101,2.42e-50,1;UBERON:0004709,2.42e-50,1;UBERON:0002529,2.42e-50,1;UBERON:0010538,2.42e-50,1;UBERON:0003661,2.42e-50,1;UBERON:0010890,2.42e-50,1;UBERON:0002471,2.42e-50,1;UBERON:0001383,2.42e-50,1;UBERON:0004357,2.42e-50,1;UBERON:0004347,2.42e-50,1;UBERON:0005420,2.42e-50,1;UBERON:0005732,2.42e-50,1;UBERON:0010758,2.42e-50,1;UBERON:0010707,2.42e-50,1;UBERON:0000978,2.42e-50,1;UBERON:0002103,2.42e-50,1;UBERON:0001665,2.42e-50,1;UBERON:0003823,2.42e-50,1;UBERON:0000154,2.42e-50,1;UBERON:0010709,2.42e-50,1;UBERON:0005733,2.42e-50,1;UBERON:0005730,2.42e-50,1;UBERON:0002426,3.99e-50,1;UBERON:0003831,3.99e-50,1;UBERON:0003898,3.99e-50,1;UBERON:0004830,3.99e-50,1;UBERON:0003830,3.99e-50,1;UBERON:0005175,3.99e-50,1;UBERON:0001774,3.99e-50,1;UBERON:0001103,3.99e-50,1;UBERON:0010084,3.99e-50,1;UBERON:0001723,1.12e-17,3;UBERON:0001033,1.12e-17,3;UBERON:0010056,1.12e-17,3;UBERON:0001134,4.28e-08,62;UBERON:0002036,4.28e-08,62;UBERON:0003082,4.28e-08,62;UBERON:0002385,7.22e-08,64;UBERON:0001015,7.22e-08,64;UBERON:0000383,7.22e-08,64;UBERON:0002329,3.59e-07,71;UBERON:0003059,3.59e-07,71;UBERON:0007282,3.59e-07,71;UBERON:0004290,3.59e-07,71;UBERON:0009618,3.59e-07,71;UBERON:0003077,4.40e-07,72;UBERON:0007285,4.40e-07,72;UBERON:0007524,5.36e-07,73 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0.247266929278557,0,0,0,0.250237039743928,0,0,0,0.150238058906597,0,0,0,0.211931901159562,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0.534192213880424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0.141405431953713,0,0,0,0,0,0.655894752046633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60515529459758,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0.171986032471617,0,0,0,0,0.353024506766001,0,0,0,0,0,0,0,0,0.144090417154106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0,0,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0.352675943690684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163771917510097,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0.118193840883968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.88457302312737,20.7378869849619,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0918948995348449,0,0,0,0,0,0,0,0,0,0,0,0,1.52401723527873,0,0,0.143444410785353,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0.247266929278557,0,0,0,0.250237039743928,0,0,0,0.150238058906597,0,0,0,0.211931901159562,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0.534192213880424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0.141405431953713,0,0,0,0,0,0.655894752046633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60515529459758,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0.171986032471617,0,0,0,0,0.353024506766001,0,0,0,0,0,0,0,0,0.144090417154106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0,0,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0.352675943690684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163771917510097,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0.118193840883968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.88457302312737,20.7378869849619,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0918948995348449,0,0,0,0,0,0,0,0,0,0,0,0,1.52401723527873,0,0,0.143444410785353,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p26@CSDA | |short_description=p26@CSDA | ||
}} | }} |
Latest revision as of 04:26, 16 September 2015
Short description: | p26@CSDA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_26_at_CSDA_5end |
Coexpression cluster: | C72_skeletal_tongue_throat_heart_diaphragm_penis_left |
Association with transcript: | 0bp_to_ENST00000539204_5end |
EntrezGene: | CSDA |
HGNC: | 2428 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data