FFCP PHASE1:Hg19::chr10:105677535..105677580,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr10:105677535..105677580,- to FFCP PHASE1:Hg19::chr10:105677535..105677580,-: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=79991 | |EntrezGene=79991 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26200 | |HGNC=26200 | ||
|TSSclassifier=strong | |||
|UniProt=Q9H668 | |UniProt=Q9H668 | ||
|association_with_transcript=-108bp_to_ENST00000369764,uc001kxl.2_5end | |||
|cluster_id=chr10:105677535..105677580,- | |||
|description=CAGE_peak_2_at_OBFC1_5end | |||
|id=chr10:105677535..105677580,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002616!9.25e-10!59;UBERON:0000033!4.48e-09!123;UBERON:0000153!9.82e-09!129;UBERON:0007811!9.82e-09!129;UBERON:0000955!1.96e-08!69;UBERON:0006238!1.96e-08!69;UBERON:0001049!6.08e-08!57;UBERON:0005068!6.08e-08!57;UBERON:0006241!6.08e-08!57;UBERON:0007135!6.08e-08!57;UBERON:0000475!1.63e-07!365;UBERON:0004121!2.55e-07!169;UBERON:0007023!4.88e-07!115;UBERON:0003075!4.91e-07!86;UBERON:0007284!4.91e-07!86 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,7.28e-09,171;UBERON:0000924,7.28e-09,171;UBERON:0006601,7.28e-09,171;UBERON:0000955,1.84e-08,68;UBERON:0006238,1.84e-08,68;UBERON:0010314,2.90e-08,132;UBERON:0001049,9.60e-08,56;UBERON:0005068,9.60e-08,56;UBERON:0006241,9.60e-08,56;UBERON:0007135,9.60e-08,56;UBERON:0000073,1.78e-07,53;UBERON:0002616,1.78e-07,53;UBERON:0010371,2.96e-07,104;UBERON:0001017,3.82e-07,81;UBERON:0003075,6.92e-07,82;UBERON:0007284,6.92e-07,82;UBERON:0006876,9.56e-07,11 | |||
|phase1_expression=0.726713517082227,2.14100523890983,2.39622486963151,3.00219895059391,1.34088328328186,2.61701557230111,2.53299878168311,1.26343974685366,1.82829939739887,0.245733936501509,0.697801167972428,1.52908960491121,0.527533956456907,4.08428964768154,3.31397375727916,0,3.01347264011988,0,1.46379839637152,2.95490539384291,2.85600967741954,0.626909442956176,1.43117993565528,1.36874425072884,0.376627918784408,0.229240217243854,0,0.157421562627358,0.786728553697808,0.767658796194425,0.77408061658038,4.59710612239464,1.8072355126695,1.84877005083394,0.309868802321207,0.142169232487422,0.587200878669695,0,0.401088894940283,0.868043482863407,0.447830948479849,0.32389366601898,0.515151135268373,0.436194716338694,0.755751887377619,0,0,0,0.619412741790207,0.575384784644301,0,0.47296445977717,0,0.645484683583826,0,0.564727018627814,0,0.224723484445085,0.612167784741805,0,0.639337125799041,1.31940520074686,0.398927315243264,1.27867425159808,0,0,0.622822248995575,0.251248665256743,1.5644487552606,0.65156653411535,0.605399502633369,0.736555271975129,0,1.05627643155971,0.425208599930087,0.419317291016752,0.673971786878971,0.600707571366025,0.964353520182481,0.570025487482497,0.79566670879636,0.547992461293902,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,1.31692042387539,1.7703879310245,1.17903228824749,1.43921049299656,4.51403537554831,0.977766799900771,1.4203434172042,0,5.01347055983281,2.06224135232386,1.99380505125259,2.16643091012012,4.35510487067296,5.07231455483525,3.4531959966772,3.59255023121603,3.47763702882063,1.4828656316206,1.33770414044857,0,2.94604291013672,1.91610246800961,1.71813722741315,2.27717722817553,3.50421955756506,1.95325036156926,3.8018081777935,3.61380285786655,2.04778577847069,2.49861453104692,2.60454977248419,2.46338399076314,1.20964045934839,0.534880391567015,0.868946423296794,0,3.35350429851818,2.04580098949649,1.44575660953827,2.50668955317945,1.30361867064741,2.3858578411533,2.91980922181582,3.02511414925017,2.66075276955077,2.19586964232815,2.0956652079634,0.728590576585084,2.22470665670658,1.29818957461873,0.696518949197069,1.46253756570752,0,0,0,0.198762407366705,2.58070378531837,0.694281003215189,1.13061588384802,1.25849830862972,0,1.25396979922086,2.32575083252396,1.06729878806013,0.66944122552934,1.61131726843659,2.28081631715554,1.22031028774085,0.367663080345869,0,1.60739510911344,0.673588117878509,1.0135033243499,1.53316637465883,0.949265659568129,1.09921046358244,0,0,0.436094052142534,0.496971951695318,1.64619665163954,0.397227542439656,0.573673241497627,1.06400514659507,0.560677600142307,0,0.49333509683432,1.24484414159907,1.48181739276657,1.79808093424805,13.7735259156888,12.09969441408,2.10889288650417,4.37024107562449,1.1409436430889,2.24173020827702,1.64408298101271,2.42809416552197,1.96631129383148,4.69554593886255,4.42203542322365,4.33968280938215,1.18800285728205,0.247266929278557,1.82032272387605,0.718618141816238,2.18836948140286,2.50237039743928,2.49357703935765,1.31693286264251,0.612975591598039,0.45071417671979,0.794025282120147,0.538168907066586,0.85422955527427,0.211931901159562,0,0.721367704669072,0.772921620136887,0.18611685633159,0.843881661206331,0.779496041289589,0.504867548488229,0.552299391853796,1.45481451136931,0.710019185033229,1.61203357164224,0.339121184620975,0.386521706326594,0.818238361772504,0.573609190778008,0,0.132529768321485,0,0,0.504641701751257,0,3.12899064659632,2.57296375277154,6.90674606762403,1.39310378409594,5.0531563716871,1.30137480043828,1.51726221070292,2.16909926895134,1.54411561825352,0.653638332277218,0.474541238222193,1.61797569792197,1.56977172100277,1.15424147083917,0.738155454624648,0,0.8231480226628,1.47008711385542,0,0,2.95394953340702,0,0.491953754172454,3.77449182656756,1.09750285408626,0,0.402115889646523,0.648119116109707,0.651616610620649,2.07986957055916,0,1.97081688457631,0.821860859650752,0.866198686566443,1.38895653772983,1.14152491340759,0.790204397959275,0.858486162094873,0.492434012174795,0.234004265139238,0.445893486866185,0,1.00789276919316,0.141775097242386,2.23896306757121,2.61570544662566,3.06706143332169,0,0.704387472105808,1.03664057770386,0.864719720501769,1.38866676769018,0.253991577168676,0,2.34434894420094,0,0,0.300343057843917,0.571652865261156,5.15802987988659,7.41132117016576,3.6669142910475,0.646358578788889,0,0,1.06375246633948,2.08014873822732,1.28603687131071,4.25547396069835,1.0656887160644,1.00084595560703,1.62786481617433,0,0.977208552881205,0.710783897485092,0.791951872933429,0.904318131178758,0.871533458600294,0.99972991182057,1.2162378064119,1.00451418286425,0,0.239624855491583,0,4.27910715122155,1.30303176000821,1.02738161275192,1.25342674267927,0.112085143993527,0.985153801009636,0.646882724578552,1.02674429023799,0.508189248444927,0,0,0,0,0.749007023947182,0,0.414415513436035,1.34960640891054,3.50119364741774,3.52644530809656,0,1.42743191037729,0.157702415033935,1.05427273493442,2.70851489754947,2.27407504055985,1.03473071292505,0,0.553107505625109,1.73767228936166,7.04884166865866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| ||
|short_description=p2@OBFC1 | |||
}} | }} |
Latest revision as of 04:35, 16 September 2015
Short description: | p2@OBFC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_OBFC1_5end |
Coexpression cluster: | NA |
Association with transcript: | -108bp_to_ENST00000369764, uc001kxl.2_5end |
EntrezGene: | OBFC1 |
HGNC: | 26200 |
UniProt: | Q9H668 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectoderm-derived structure | 7.28e-09 | 171 |
ectoderm | 7.28e-09 | 171 |
presumptive ectoderm | 7.28e-09 | 171 |
brain | 1.84e-08 | 68 |
future brain | 1.84e-08 | 68 |
structure with developmental contribution from neural crest | 2.90e-08 | 132 |
neural tube | 9.60e-08 | 56 |
neural rod | 9.60e-08 | 56 |
future spinal cord | 9.60e-08 | 56 |
neural keel | 9.60e-08 | 56 |
regional part of nervous system | 1.78e-07 | 53 |
regional part of brain | 1.78e-07 | 53 |
ecto-epithelium | 2.96e-07 | 104 |
central nervous system | 3.82e-07 | 81 |
neural plate | 6.92e-07 | 82 |
presumptive neural plate | 6.92e-07 | 82 |
vasculature of organ | 9.56e-07 | 11 |