FFCP PHASE1:Hg19::chr3:154797428..154797450,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4311 | |EntrezGene=4311 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7154 | |HGNC=7154 | ||
|TSSclassifier=strong | |||
|UniProt=P08473 | |UniProt=P08473 | ||
|association_with_transcript=0bp_to_ENST00000460393,ENST00000491597,NM_000902,uc003fab.1_5end | |association_with_transcript=0bp_to_ENST00000460393,ENST00000491597,NM_000902,uc003fab.1_5end | ||
|cluster_id=chr3:154797428..154797450,+ | |||
|coexpression_cluster_id=C2 | |coexpression_cluster_id=C2 | ||
|description=CAGE_peak_9_at_MME_5end | |description=CAGE_peak_9_at_MME_5end | ||
|id=chr3:154797428..154797450,+ | |id=chr3:154797428..154797450,+ | ||
|ontology_enrichment_celltype=CL:0000055!9.57e-23!180;CL:0000057!7.27e-12!75;CL:0000680!7.17e-11!57;CL:0000056!7.17e-11!57;CL:0000355!7.17e-11!57;CL:0000187!1.15e-09!54;CL:0002620!4.12e-09!23;CL:0000393!3.01e-08!60;CL:0000211!3.01e-08!60;CL:0000183!3.95e-08!59;CL:0000048!4.25e-08!430;CL:0000034!9.75e-08!444;CL:0000723!2.20e-07!436 | |ontology_enrichment_celltype=CL:0000055!9.57e-23!180;CL:0000057!7.27e-12!75;CL:0000680!7.17e-11!57;CL:0000056!7.17e-11!57;CL:0000355!7.17e-11!57;CL:0000187!1.15e-09!54;CL:0002620!4.12e-09!23;CL:0000393!3.01e-08!60;CL:0000211!3.01e-08!60;CL:0000183!3.95e-08!59;CL:0000048!4.25e-08!430;CL:0000034!9.75e-08!444;CL:0000723!2.20e-07!436 | ||
|ontology_enrichment_celltype_v019=CL:0002620;2.05e-11;23!CL:0000188;8.68e-08;9!CL:0000187;2.10e-07;55!CL:0000723;2.77e-07;61!CL:0000057;2.84e-07;73 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,9.75e-16,76;CL:0000680,2.87e-13,58;CL:0000056,2.87e-13,58;CL:0000355,2.87e-13,58;CL:0000048,7.04e-13,427;CL:0000723,4.62e-12,433;CL:0000034,8.46e-12,441;CL:0000187,1.11e-11,55;CL:0002620,2.05e-11,23;CL:0000393,2.37e-09,61;CL:0000211,2.37e-09,61;CL:0000188,7.25e-08,9;CL:0000192,7.42e-07,43;CL:0000514,7.42e-07,43 | |||
|ontology_enrichment_development_v019=CL:0000355;6.17e-08;58 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!1.60e-16!83;UBERON:0002329!1.60e-16!83;UBERON:0003077!1.60e-16!83;UBERON:0003059!1.60e-16!83;UBERON:0007282!1.60e-16!83;UBERON:0009618!1.60e-16!83;UBERON:0007285!1.60e-16!83;UBERON:0004290!1.42e-14!70;UBERON:0000486!1.00e-11!82;UBERON:0001134!1.13e-10!61;UBERON:0002036!1.13e-10!61;UBERON:0003082!1.13e-10!61;UBERON:0002385!1.49e-10!63;UBERON:0001015!1.49e-10!63;UBERON:0000383!1.49e-10!63;UBERON:0005256!6.14e-10!143;UBERON:0003102!3.46e-08!95;UBERON:0002100!8.87e-08!216;UBERON:0000475!9.16e-08!365;UBERON:0002199!1.29e-07!45;UBERON:0002416!1.29e-07!45;UBERON:0002097!4.55e-07!40 | |ontology_enrichment_uberon=UBERON:0000914!1.60e-16!83;UBERON:0002329!1.60e-16!83;UBERON:0003077!1.60e-16!83;UBERON:0003059!1.60e-16!83;UBERON:0007282!1.60e-16!83;UBERON:0009618!1.60e-16!83;UBERON:0007285!1.60e-16!83;UBERON:0004290!1.42e-14!70;UBERON:0000486!1.00e-11!82;UBERON:0001134!1.13e-10!61;UBERON:0002036!1.13e-10!61;UBERON:0003082!1.13e-10!61;UBERON:0002385!1.49e-10!63;UBERON:0001015!1.49e-10!63;UBERON:0000383!1.49e-10!63;UBERON:0005256!6.14e-10!143;UBERON:0003102!3.46e-08!95;UBERON:0002100!8.87e-08!216;UBERON:0000475!9.16e-08!365;UBERON:0002199!1.29e-07!45;UBERON:0002416!1.29e-07!45;UBERON:0002097!4.55e-07!40 | ||
|ontology_enrichment_uberon_v019=UBERON:0002385;1.24e-08;31!UBERON:0001015;1.24e-08;31!UBERON:0000383;1.24e-08;31!UBERON:0002097;6.01e-08;41!UBERON:0002067;1.54e-07;9!UBERON:0002199;1.71e-07;46!UBERON:0002416;1.71e-07;46!UBERON:0001134;3.29e-07;16!UBERON:0002036;3.29e-07;16!UBERON:0003102;7.14e-07;50 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007524,2.89e-17,73;UBERON:0002329,3.12e-17,71;UBERON:0003059,3.12e-17,71;UBERON:0007282,3.12e-17,71;UBERON:0004290,3.12e-17,71;UBERON:0009618,3.12e-17,71;UBERON:0003077,9.60e-17,72;UBERON:0007285,9.60e-17,72;UBERON:0007503,4.03e-14,78;UBERON:0000486,8.57e-14,83;UBERON:0001134,3.52e-12,62;UBERON:0002036,3.52e-12,62;UBERON:0003082,3.52e-12,62;UBERON:0002385,2.23e-11,64;UBERON:0001015,2.23e-11,64;UBERON:0000383,2.23e-11,64;UBERON:0002199,2.64e-11,46;UBERON:0002416,2.64e-11,46;UBERON:0002097,2.40e-10,41;UBERON:0005256,2.07e-09,122;UBERON:0003102,2.12e-09,99;UBERON:0003104,2.17e-08,160;UBERON:0009142,2.17e-08,160;UBERON:0002067,1.04e-07,9;UBERON:0004016,1.04e-07,9;UBERON:0010083,1.04e-07,9;UBERON:0000490,5.12e-07,148 | |||
|phase1_expression=4.36028110249336,7.70761886007539,0.986680828671798,2.00146596706261,0,0,2.53299878168311,0,2.87304191019822,0.245733936501509,0,0.218441372130172,0,0.495065411840187,1.65698687863958,2.01697543935533,1.20538905604795,1.46062018077475,2.92759679274304,0,0,0,0.286235987131057,0.410623275218653,2.38531015230125,0,0,0,0,0,0,0,0,0.739508020333575,11.310211284724,7.67713855432076,0.293600439334847,0,0.200544447470142,0,0,0,0,0.436194716338694,0,0.242584061187816,0.464858073811369,0,0.309706370895104,0.575384784644301,0,0.236482229888585,0,0,0,0,0.272906150057846,0,0.306083892370903,0,0.639337125799041,0,0.199463657621632,0.426224750532694,0,0,0,0,0,0.217188844705117,0,0.368277635987565,0.316462387440884,0,0,0,0,0,0.16072558669708,0,0,0,0,0,0.889509253863555,0,0,0.574752439954483,0,0.954053754535364,0,0.587237189370939,1.14681968437569,2.64342657158052,0.560508562981536,2.10707267820062,0,0,0.205601498999509,0.167186495390678,0,0,0,0,0.294605907474837,0,0.270803863765016,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0.506039384039006,0,0,0,0.150575119077773,0,1.24930726552346,0.473554504088034,0,0.201606743224732,0,0,0,2.01210257911091,1.2786256184353,0.361439152384566,0.50133791063589,0.724232594804119,0,0.973269740605272,1.32348744029695,0.886917589850256,0.614843499851882,0.261958150995425,0,0,0,0,0.132957960518865,1.19245312152671,0,0.74291500265913,0.198762407366705,0,0.347140501607594,0,0.838998872419812,0,0.208994966536811,1.55050055501597,1.42306505074684,0.66944122552934,0,0,0,0.367663080345869,0,0.803697554556718,0,0.337834441449967,0,0,0,26.3560834872127,108.578473961531,0,0,1.8994576749687,0.794455084879313,4.30254931123221,1.06400514659507,0,0,0,2.48968828319813,1.61652806483626,1.63461903113459,0.151357427644931,0,1.40592859100278,8.74048215124897,3.99330275081114,5.23070381931304,13.2700983467454,11.9785978832417,11.9383185696911,5.30800845262722,5.15904132709426,4.33968280938215,23.7600571456411,6.92347401979959,0,0,10.100166837244,8.00758527180571,5.54128230968366,4.38977620880838,0.30648779579902,8.11285518095623,0.794025282120147,2.15267562826634,8.96941033037983,7.62954844174423,0.600182192168805,4.63736381572975,4.12224864073007,3.90845398296339,1.0126579934476,2.82567314967476,1.26216887122057,4.69454483075727,1.61646056818812,1.42003837006646,1.81353776809752,1.18692414617341,0,0,0,0.121973706129595,0.265059536642971,0.580969714347592,0.414644220061482,0,0,1.56449532329816,3.85944562915731,2.76269842704961,4.64367928031979,5.77503585335668,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0,0,0,0,0,16.3341346783421,0.245976877086227,5.49016992955282,0,0,0,0.740707561268237,1.3032332212413,0,0,0.115930404975077,1.05667824812239,0,0,0,0,0,0,0.234004265139238,0,0.93733833986777,0,0.425325291727159,0.447792613514241,0,1.15014803749563,0,0,0.829312462163088,0.288239906833923,0.25248486685276,11.1756293954218,4.20187268114105,0,0,4.11309970813294,14.416466776508,1.71495859578347,0.224262168690721,0,0.7333828582095,2.97324946242889,0,4.22651376278,4.78688609852767,2.08014873822732,0.257207374262142,0,0.266422179016099,3.71742783511184,3.25572963234866,8.23240336780769,7.49193223875591,3.55391948742546,19.0068449504023,0.301439377059586,0,0,0,0,0,0,0,2.85273810081437,4.05387658669222,2.67119219315498,11.8180235738331,0,0,0,0,0.254094624222463,0,0,0,0,60.6695689397218,50.8574480646842,108.576864520241,1.34960640891054,2.00068208423871,2.71265023699736,0.415941723061614,0.356857977594324,0.788512075169673,0.702848489956279,3.00946099727719,4.5481500811197,1.03473071292505,0.664225598535437,0,14.1620291582975,0,0,0.206768026122887,0.862856803274467,0,0.303127571446259,1.66435439510497,0.604780586659361,1.73675465473144,3.52962538562544,7.57782254969299,0.256278298511402,2.55853624533352,0.321707842287215,1.48418066444991,2.00472601943452,1.42049380250502,3.20295908453856,0.519254429183621,1.04589340613963,0,0.601519410909855,0.552485933615378,1.83703117063371,2.1850940160806,3.40923478894503,0.902399225814824,1.15523005656622,0,0,0.633309773357254,0,0.340187410553031,0.215915916102139,0,0.270946437543853,0,0.254876273045038,0,0.447749509444357,0,0,1.79515087581472,0.984043937099117,0.976135183992909,0.309123034943167,6.40986253728404,6.1882124940441,0,0,1.6068392984416,5.99358453411156,3.54311819363682,4.91211759123615,8.27019434907183,16.3278772199776,16.6769198001363,5.62495740946266,2.04773681987496,0.165284915360978,0.192190067365106,0.382838137483752,0,1.39453664789186,4.40737285562896,3.485186350803,0.924100740528266,0,0.869932992075073,0.37064843820784,0.429374660225974,3.72158369359667,4.11293252134344,3.8126038784765,1.02359116524534,4.2793898803392,1.27281299170375,1.56989728039846,8.99362287916574,5.4907405947211,4.71249609382746,0.202182481573316,0,1.26377536871694,0.48763373908959,2.92456187557541,0,5.18699663350346,2.96951407102797,0,1.10273068709225,0,0,0.578775534266688,1.31178950409327,1.42037263873893,1.239293992399,1.97186921772569,38.864476447298,30.3589536730544,0,2.83808851256478,0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| ||
|short_description=p9@MME | |short_description=p9@MME | ||
}} | }} |
Latest revision as of 04:39, 16 September 2015
Short description: | p9@MME |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_MME_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 0bp_to_ENST00000460393, ENST00000491597, NM_000902, uc003fab.1_5end |
EntrezGene: | MME |
HGNC: | 7154 |
UniProt: | P08473 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 9.75e-16 | 76 |
muscle precursor cell | 2.87e-13 | 58 |
myoblast | 2.87e-13 | 58 |
multi-potent skeletal muscle stem cell | 2.87e-13 | 58 |
multi fate stem cell | 7.04e-13 | 427 |
somatic stem cell | 4.62e-12 | 433 |
stem cell | 8.46e-12 | 441 |
muscle cell | 1.11e-11 | 55 |
skin fibroblast | 2.05e-11 | 23 |
electrically responsive cell | 2.37e-09 | 61 |
electrically active cell | 2.37e-09 | 61 |
cell of skeletal muscle | 7.25e-08 | 9 |
smooth muscle cell | 7.42e-07 | 43 |
smooth muscle myoblast | 7.42e-07 | 43 |
Ontology term | p-value | n |
---|---|---|
dense mesenchyme tissue | 2.89e-17 | 73 |
somite | 3.12e-17 | 71 |
presomitic mesoderm | 3.12e-17 | 71 |
presumptive segmental plate | 3.12e-17 | 71 |
dermomyotome | 3.12e-17 | 71 |
trunk paraxial mesoderm | 3.12e-17 | 71 |
paraxial mesoderm | 9.60e-17 | 72 |
presumptive paraxial mesoderm | 9.60e-17 | 72 |
epithelial vesicle | 4.03e-14 | 78 |
multilaminar epithelium | 8.57e-14 | 83 |
skeletal muscle tissue | 3.52e-12 | 62 |
striated muscle tissue | 3.52e-12 | 62 |
myotome | 3.52e-12 | 62 |
muscle tissue | 2.23e-11 | 64 |
musculature | 2.23e-11 | 64 |
musculature of body | 2.23e-11 | 64 |
integument | 2.64e-11 | 46 |
integumental system | 2.64e-11 | 46 |
skin of body | 2.40e-10 | 41 |
trunk mesenchyme | 2.07e-09 | 122 |
surface structure | 2.12e-09 | 99 |
mesenchyme | 2.17e-08 | 160 |
entire embryonic mesenchyme | 2.17e-08 | 160 |
dermis | 1.04e-07 | 9 |
dermatome | 1.04e-07 | 9 |
future dermis | 1.04e-07 | 9 |
unilaminar epithelium | 5.12e-07 | 148 |