FFCP PHASE1:Hg19::chr3:154797700..154797725,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4311 | |EntrezGene=4311 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7154 | |HGNC=7154 | ||
|TSSclassifier=strong | |||
|UniProt=P08473 | |UniProt=P08473 | ||
|association_with_transcript=0bp_to_NM_007287,uc003fac.1_5end | |association_with_transcript=0bp_to_NM_007287,uc003fac.1_5end | ||
|cluster_id=chr3:154797700..154797725,+ | |||
|coexpression_cluster_id=C2728 | |||
|description=CAGE_peak_4_at_MME_5end | |description=CAGE_peak_4_at_MME_5end | ||
|id=chr3:154797700..154797725,+ | |id=chr3:154797700..154797725,+ | ||
|ontology_enrichment_celltype=CL:0000055!9.02e-33!180;CL:0000057!5.91e-18!75;CL:0000680!2.64e-15!57;CL:0000056!2.64e-15!57;CL:0000355!2.64e-15!57;CL:0000187!8.99e-14!54;CL:0000393!9.01e-12!60;CL:0000211!9.01e-12!60;CL:0000048!2.23e-11!430;CL:0000183!2.89e-11!59;CL:0002620!6.39e-11!23;CL:0000723!1.31e-10!436;CL:0000192!1.75e-10!42;CL:0000514!1.75e-10!42;CL:0000034!3.84e-10!444;CL:0002371!1.96e-08!591;CL:0000136!2.71e-07!15;CL:0000359!3.42e-07!32;CL:0000144!8.80e-07!625 | |ontology_enrichment_celltype=CL:0000055!9.02e-33!180;CL:0000057!5.91e-18!75;CL:0000680!2.64e-15!57;CL:0000056!2.64e-15!57;CL:0000355!2.64e-15!57;CL:0000187!8.99e-14!54;CL:0000393!9.01e-12!60;CL:0000211!9.01e-12!60;CL:0000048!2.23e-11!430;CL:0000183!2.89e-11!59;CL:0002620!6.39e-11!23;CL:0000723!1.31e-10!436;CL:0000192!1.75e-10!42;CL:0000514!1.75e-10!42;CL:0000034!3.84e-10!444;CL:0002371!1.96e-08!591;CL:0000136!2.71e-07!15;CL:0000359!3.42e-07!32;CL:0000144!8.80e-07!625 | ||
|ontology_enrichment_celltype_v019=CL:0002620;4.20e-13;23!CL:0000723;7.80e-10;61!CL:0000134;1.37e-09;55!CL:0000187;6.98e-09;55!CL:0000048;1.39e-08;58!CL:0000057;1.74e-08;73!CL:0000192;1.06e-07;43!CL:0000136;1.32e-07;13!CL:0000034;1.61e-07;69!CL:0002320;2.13e-07;188!CL:0000393;4.10e-07;61!CL:0000211;4.10e-07;61!CL:0000359;9.15e-07;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,8.46e-22,76;CL:0000048,1.28e-18,427;CL:0000723,1.78e-17,433;CL:0000680,1.52e-16,58;CL:0000056,1.52e-16,58;CL:0000355,1.52e-16,58;CL:0000034,2.45e-16,441;CL:0000187,9.47e-15,55;CL:0002620,3.49e-13,23;CL:0000393,9.99e-12,61;CL:0000211,9.99e-12,61;CL:0000192,1.16e-10,43;CL:0000514,1.16e-10,43;CL:0000136,8.92e-09,15;CL:0000219,4.35e-08,386;CL:0002320,6.34e-08,361;CL:0000134,9.52e-08,354;CL:0000359,6.92e-07,32 | |||
|ontology_enrichment_development_v019=CL:0000355;2.62e-09;58!CL:0000514;1.06e-07;43 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:2394;8.23e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,7.94e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0000914!8.53e-21!83;UBERON:0002329!8.53e-21!83;UBERON:0003077!8.53e-21!83;UBERON:0003059!8.53e-21!83;UBERON:0007282!8.53e-21!83;UBERON:0009618!8.53e-21!83;UBERON:0007285!8.53e-21!83;UBERON:0004290!3.88e-18!70;UBERON:0000486!3.72e-15!82;UBERON:0001134!6.24e-14!61;UBERON:0002036!6.24e-14!61;UBERON:0003082!6.24e-14!61;UBERON:0002385!1.06e-13!63;UBERON:0001015!1.06e-13!63;UBERON:0000383!1.06e-13!63;UBERON:0003102!2.21e-13!95;UBERON:0002199!4.02e-11!45;UBERON:0002416!4.02e-11!45;UBERON:0005256!1.07e-10!143;UBERON:0002097!3.24e-09!40;UBERON:0002100!5.34e-09!216;UBERON:0000475!7.71e-08!365 | |ontology_enrichment_uberon=UBERON:0000914!8.53e-21!83;UBERON:0002329!8.53e-21!83;UBERON:0003077!8.53e-21!83;UBERON:0003059!8.53e-21!83;UBERON:0007282!8.53e-21!83;UBERON:0009618!8.53e-21!83;UBERON:0007285!8.53e-21!83;UBERON:0004290!3.88e-18!70;UBERON:0000486!3.72e-15!82;UBERON:0001134!6.24e-14!61;UBERON:0002036!6.24e-14!61;UBERON:0003082!6.24e-14!61;UBERON:0002385!1.06e-13!63;UBERON:0001015!1.06e-13!63;UBERON:0000383!1.06e-13!63;UBERON:0003102!2.21e-13!95;UBERON:0002199!4.02e-11!45;UBERON:0002416!4.02e-11!45;UBERON:0005256!1.07e-10!143;UBERON:0002097!3.24e-09!40;UBERON:0002100!5.34e-09!216;UBERON:0000475!7.71e-08!365 | ||
|ontology_enrichment_uberon_v019=UBERON:0002385;2.92e-10;31!UBERON:0001015;2.92e-10;31!UBERON:0000383;2.92e-10;31!UBERON:0002097;9.80e-09;41!UBERON:0002199;1.38e-08;46!UBERON:0002416;1.38e-08;46!UBERON:0003102;3.38e-08;50!UBERON:0002384;1.68e-07;198!UBERON:0001013;3.94e-07;14!UBERON:0002067;5.67e-07;9 | |||
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| ||
|short_description=p4@MME | |short_description=p4@MME | ||
}} | }} |
Latest revision as of 04:43, 16 September 2015
Short description: | p4@MME |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_MME_5end |
Coexpression cluster: | C2728_Smooth_Neutrophils_Pancreatic_tridermal_Fibroblast_mesenchymal_Mesenchymal |
Association with transcript: | 0bp_to_NM_007287, uc003fac.1_5end |
EntrezGene: | MME |
HGNC: | 7154 |
UniProt: | P08473 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 8.46e-22 | 76 |
multi fate stem cell | 1.28e-18 | 427 |
somatic stem cell | 1.78e-17 | 433 |
muscle precursor cell | 1.52e-16 | 58 |
myoblast | 1.52e-16 | 58 |
multi-potent skeletal muscle stem cell | 1.52e-16 | 58 |
stem cell | 2.45e-16 | 441 |
muscle cell | 9.47e-15 | 55 |
skin fibroblast | 3.49e-13 | 23 |
electrically responsive cell | 9.99e-12 | 61 |
electrically active cell | 9.99e-12 | 61 |
smooth muscle cell | 1.16e-10 | 43 |
smooth muscle myoblast | 1.16e-10 | 43 |
fat cell | 8.92e-09 | 15 |
motile cell | 4.35e-08 | 386 |
connective tissue cell | 6.34e-08 | 361 |
mesenchymal cell | 9.52e-08 | 354 |
vascular associated smooth muscle cell | 6.92e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
somite | 7.92e-20 | 71 |
presomitic mesoderm | 7.92e-20 | 71 |
presumptive segmental plate | 7.92e-20 | 71 |
dermomyotome | 7.92e-20 | 71 |
trunk paraxial mesoderm | 7.92e-20 | 71 |
dense mesenchyme tissue | 8.29e-20 | 73 |
paraxial mesoderm | 3.06e-19 | 72 |
presumptive paraxial mesoderm | 3.06e-19 | 72 |
multilaminar epithelium | 3.90e-16 | 83 |
epithelial vesicle | 4.34e-16 | 78 |
skeletal muscle tissue | 6.93e-15 | 62 |
striated muscle tissue | 6.93e-15 | 62 |
myotome | 6.93e-15 | 62 |
muscle tissue | 8.05e-15 | 64 |
musculature | 8.05e-15 | 64 |
musculature of body | 8.05e-15 | 64 |
integument | 7.42e-14 | 46 |
integumental system | 7.42e-14 | 46 |
surface structure | 1.08e-12 | 99 |
skin of body | 1.62e-11 | 41 |
trunk mesenchyme | 1.64e-09 | 122 |
mesenchyme | 1.49e-08 | 160 |
entire embryonic mesenchyme | 1.49e-08 | 160 |
connective tissue | 7.85e-08 | 371 |
adipose tissue | 3.89e-07 | 14 |
unilaminar epithelium | 4.18e-07 | 148 |
dermis | 5.04e-07 | 9 |
dermatome | 5.04e-07 | 9 |
future dermis | 5.04e-07 | 9 |
trunk | 5.32e-07 | 199 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 7.94e-08 | 14 |