FFCP PHASE1:Hg19::chr2:238767219..238767230,+: Difference between revisions
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|id=chr2:238767219..238767230,+
|short_description=p7@RAMP1
|description=CAGE_peak_7_at_RAMP1_5end
|association_with_transcript=-305bp_to_ENST00000404910_5end
|Ent...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10267 | |EntrezGene=10267 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9843 | |HGNC=9843 | ||
|TSSclassifier=strong | |||
|UniProt=E9PC20 | |UniProt=E9PC20 | ||
|association_with_transcript=-305bp_to_ENST00000404910_5end | |||
|cluster_id=chr2:238767219..238767230,+ | |||
|coexpression_cluster_id=C61 | |||
|description=CAGE_peak_7_at_RAMP1_5end | |||
|id=chr2:238767219..238767230,+ | |||
|ontology_enrichment_celltype=CL:0000990!1.50e-08!8;CL:0000453!6.53e-08!5;CL:0000451!7.88e-07!10 | |||
|ontology_enrichment_celltype_v019=CL:0000453;2.20e-45;5!CL:0000990;1.27e-25;8!CL:0000451;4.06e-21;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000453,1.89e-45,5;CL:0000990,1.17e-25,8;CL:0000451,3.79e-21,10 | |||
|ontology_enrichment_development_v019=UBERON:0005425;8.64e-26;1!UBERON:0003056;1.60e-09;3!UBERON:0009847;1.60e-09;3!UBERON:0003353;1.60e-09;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1909;1.29e-13;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,1.07e-13,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!3.50e-32!115;UBERON:0000955!6.76e-26!69;UBERON:0006238!6.76e-26!69;UBERON:0001049!4.12e-24!57;UBERON:0005068!4.12e-24!57;UBERON:0006241!4.12e-24!57;UBERON:0007135!4.12e-24!57;UBERON:0000073!3.86e-23!94;UBERON:0001016!3.86e-23!94;UBERON:0002616!5.20e-23!59;UBERON:0001017!8.80e-22!82;UBERON:0002020!1.16e-20!34;UBERON:0003528!1.16e-20!34;UBERON:0002346!1.35e-20!90;UBERON:0001893!1.39e-20!34;UBERON:0005743!2.54e-20!86;UBERON:0002780!4.08e-20!41;UBERON:0001890!4.08e-20!41;UBERON:0006240!4.08e-20!41;UBERON:0001869!5.26e-20!32;UBERON:0003080!1.71e-19!42;UBERON:0003075!3.01e-19!86;UBERON:0007284!3.01e-19!86;UBERON:0002791!4.30e-19!33;UBERON:0000956!1.72e-16!25;UBERON:0000203!1.72e-16!25;UBERON:0000033!7.33e-15!123;UBERON:0000924!1.10e-14!173;UBERON:0006601!1.10e-14!173;UBERON:0000153!1.19e-14!129;UBERON:0007811!1.19e-14!129;UBERON:0002619!1.81e-14!22;UBERON:0003056!6.48e-14!61;UBERON:0001950!1.03e-13!20;UBERON:0004121!1.34e-13!169;UBERON:0004732!2.38e-09!13;UBERON:0000025!3.00e-09!194;UBERON:0000200!1.11e-08!6;UBERON:0004111!5.22e-08!241;UBERON:0004733!1.03e-07!12;UBERON:0002028!1.03e-07!12;UBERON:0007277!1.03e-07!12;UBERON:0002771!3.37e-07!3;UBERON:0000988!4.43e-07!3;UBERON:0001871!9.46e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;8.64e-26;1!UBERON:0001785;8.64e-26;1!UBERON:0002464;8.64e-26;1!UBERON:0004904;8.64e-26;1!UBERON:0001021;8.64e-26;1!UBERON:0003714;1.29e-13;2!UBERON:0005162;1.29e-13;2!UBERON:0000122;1.29e-13;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,1.26e-25,1;UBERON:0001785,1.26e-25,1;UBERON:0002464,1.26e-25,1;UBERON:0004904,1.26e-25,1;UBERON:0001021,1.26e-25,1;UBERON:0003902,1.26e-25,1;UBERON:0005425,1.26e-25,1;UBERON:0003714,1.55e-13,2;UBERON:0005162,1.55e-13,2;UBERON:0000122,1.55e-13,2;UBERON:0001781,2.04e-07,4 | |||
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| ||
|short_description=p7@RAMP1 | |||
}} | }} |
Latest revision as of 05:06, 16 September 2015
Short description: | p7@RAMP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_RAMP1_5end |
Coexpression cluster: | C61_migratory_Dendritic_immature_Macrophage_xeroderma_cord_b |
Association with transcript: | -305bp_to_ENST00000404910_5end |
EntrezGene: | RAMP1 |
HGNC: | 9843 |
UniProt: | E9PC20 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Langerhans cell | 1.89e-45 | 5 |
conventional dendritic cell | 1.17e-25 | 8 |
dendritic cell | 3.79e-21 | 10 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 1.26e-25 | 1 |
cranial nerve | 1.26e-25 | 1 |
nerve trunk | 1.26e-25 | 1 |
nerve connecting eye with brain | 1.26e-25 | 1 |
nerve | 1.26e-25 | 1 |
retinal neural layer | 1.26e-25 | 1 |
presumptive neural retina | 1.26e-25 | 1 |
neural tissue | 1.55e-13 | 2 |
multi cell component structure | 1.55e-13 | 2 |
neuron projection bundle | 1.55e-13 | 2 |
layer of retina | 2.04e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
melanoma | 1.07e-13 | 2 |