FFCP PHASE1:Hg19::chr10:105880871..105880889,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr10:105880871..105880889,+ to FFCP PHASE1:Hg19::chr10:105880871..105880889,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=119392 | |EntrezGene=119392 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=29574 | |HGNC=29574 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_AK123954_5end | |||
|cluster_id=chr10:105880871..105880889,+ | |||
|coexpression_cluster_id=C427 | |||
|description=CAGE_peak_5_at_SFR1_5end | |||
|id=chr10:105880871..105880889,+ | |||
|ontology_enrichment_celltype=CL:0002057!1.08e-19!42;CL:0000860!6.67e-19!45;CL:0000738!1.51e-15!140;CL:0000766!2.11e-12!76;CL:0002031!3.31e-12!124;CL:0002087!4.46e-12!119;CL:0000557!5.30e-10!71;CL:0002009!7.01e-10!65;CL:0002194!5.70e-09!63;CL:0000576!5.70e-09!63;CL:0000040!5.70e-09!63;CL:0000559!5.70e-09!63;CL:0000839!1.14e-08!70;CL:0000037!3.00e-07!172;CL:0000566!3.00e-07!172;CL:0002393!4.28e-07!9;CL:0002397!4.28e-07!9;CL:0000988!5.40e-07!182;CL:0002032!7.33e-07!165;CL:0000837!7.33e-07!165 | |||
|ontology_enrichment_celltype_v019=CL:0000766;2.18e-15;69!CL:0000576;1.21e-14;48!CL:0000860;2.03e-14;33!CL:0002057;2.03e-14;33!CL:0000094;1.36e-12;8!CL:0002393;6.74e-12;6!CL:0002397;6.74e-12;6!CL:0000081;2.86e-11;11!CL:0002087;4.35e-10;104!CL:0000473;8.27e-10;39!CL:0000234;8.27e-10;39!CL:0000738;2.81e-08;136!CL:0000623;1.81e-07;3!CL:0000767;1.86e-07;3!CL:0000219;7.42e-07;193 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,2.25e-35,136;CL:0000860,5.43e-29,42;CL:0002057,5.43e-29,42;CL:0000766,8.81e-29,72;CL:0002031,1.45e-27,120;CL:0002032,5.57e-26,161;CL:0000837,5.57e-26,161;CL:0000037,2.32e-25,168;CL:0000988,2.57e-24,177;CL:0000473,2.85e-24,48;CL:0000234,2.85e-24,48;CL:0002087,1.50e-23,115;CL:0000557,3.26e-22,67;CL:0002009,4.19e-20,61;CL:0000839,2.31e-19,66;CL:0000763,5.79e-19,108;CL:0000049,5.79e-19,108;CL:0002194,1.01e-17,59;CL:0000576,1.01e-17,59;CL:0000040,1.01e-17,59;CL:0000559,1.01e-17,59;CL:0002393,4.09e-17,9;CL:0002397,4.09e-17,9;CL:0000094,1.53e-12,8;CL:0000134,4.54e-12,354;CL:0000034,1.38e-11,441;CL:0002320,1.81e-11,361;CL:0000081,3.32e-11,11;CL:0000723,6.26e-11,433;CL:0000048,7.48e-11,427;CL:0000219,2.20e-09,386;CL:0000623,1.76e-07,3;CL:0000825,1.76e-07,3;CL:0000767,1.96e-07,3;CL:0000838,3.51e-07,52;CL:0000542,5.77e-07,53;CL:0000051,5.77e-07,53 | |||
|ontology_enrichment_development_v019=CL:0002057;8.20e-20;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.70e-12!102;UBERON:0003061!1.70e-12!102;UBERON:0002193!1.48e-11!112;UBERON:0002371!5.57e-10!80;UBERON:0001474!2.94e-09!86;UBERON:0003081!3.54e-07!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,8.31e-19,98;UBERON:0003061,8.31e-19,98;UBERON:0002371,1.86e-18,76;UBERON:0001474,2.01e-16,82;UBERON:0002193,4.70e-16,108;UBERON:0002405,1.45e-14,93;UBERON:0004765,3.78e-14,90;UBERON:0001434,7.65e-12,100;UBERON:0003081,5.58e-11,203;UBERON:0002384,1.18e-10,371;UBERON:0002204,6.29e-08,167 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,2.53299878168311,0.631719873426831,0,0,0.697801167972428,0.436882744260345,0.791300934685361,0.37129905888014,0,2.01697543935533,0,0,0.487932798790507,0.123121058076788,0.204000691244253,0,0.286235987131057,0.410623275218653,0.376627918784408,0.305653622991805,0.410502947249729,0.314843125254717,7.08055698328027,8.06041736004147,3.56077083626975,0.919421224478927,0.30120591877825,1.10926203050036,0,0.142169232487422,0.880801318004542,6.64794490238253,4.61252229181326,2.82114131930607,0,0,0,0.581592955118259,0.377875943688809,0.727752183563449,0.929716147622738,0.822335776043652,2.47765096716083,0.863077176966451,2.0492856522328,3.07426898855161,2.06847408441971,2.5819387343353,4.06279459783025,1.12945403725563,1.36453075028923,2.24723484445085,3.67300670845083,3.20929027076094,0.639337125799041,0.659702600373432,0.398927315243264,0,4.06292934080018,2.26954089876456,4.9825779919646,0.75374599577023,1.5644487552606,0.868755378820466,0.605399502633369,3.68277635987565,7.27863491114034,3.16882929467913,1.70083439972035,3.77385561915077,0.336985893439485,1.50176892841506,1.6072558669708,3.42015292489498,1.79025009479181,3.83594722905731,0,1.63841583378639,0,3.84057200309856,0.800791974072025,1.14950487990897,0,0,6.83055562931338,7.04684627245127,5.3518251937532,3.96513985737078,3.36305137788922,0.526768169550154,2.75393678159366,8.64623678048162,2.87842098599313,0,0.32592226663359,0,0,0.334231370655521,0.294605907474837,1.10766947291811,0.541607727530031,0.128091319725675,0.650296737799391,0.493313713811028,0.552700035571697,0.579606171470105,0.889719378972363,0.802622484269139,2.09071047609954,0.113309342697566,4.21542542962113,5.84166657320471,5.06039384039006,0.95569624297229,0,0.950452044448374,1.80690142893327,0.127986611154418,0,0,0,5.24177532384304,7.75576567772171,2.89648807765598,0,0,0,0.722878304769133,0.50133791063589,0,0,0.973269740605272,0.0945348171640679,0.221729397462564,0.087834785693126,0.72038491523742,0.364295288292542,0,0,0,0,0.238490624305342,0.571994910780128,0,0,0,0.694281003215189,0.56530794192401,0,0.275118041940067,0.835979866147242,0.516833518338658,0,0.33472061276467,0,0,0.488124115096339,0.735326160691737,0,0.17859945656816,0.22452937262617,0.112611480483322,1.53316637465883,0,0,2.63560834872127,15.511210565933,0,0,0,0.397227542439656,0.860509862246441,0.354668382198357,0,0,0,0,0.269421344139376,0.326923806226917,0.151357427644931,0,0,0,0.570471821544449,0.149448680551801,0,0.161872944368132,0.280901613404497,0,0,0.103325781175765,0,0,0,0.718618141816238,0.505008341862199,0.125118519871964,0,0.438977620880838,0,0,0.794025282120147,0.358779271377724,0.427114777637135,0,1.80054657650641,0.103052529238439,0.772921620136887,0.37223371266318,0.675105328965065,0.0974370051611986,0.252433774244115,0,0.323292113637624,1.42003837006646,0.10075209822764,0.169560592310488,0.773043412653187,0.818238361772504,0.286804595389004,0.243947412259191,0,0.116193942869518,0.310983165046111,0.252320850875628,0,1.56449532329816,0,1.38134921352481,0.464367928031979,0,0.354920400119532,0.337169380156203,0.241011029883482,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0.171567810298526,0.548751427043128,1.1240175325762,0.502644862058154,0.555530670951178,0.325808305310325,0,0,0.231860809950154,0,0.433099343283221,0,0.570762456703795,2.37061319387782,0,0,0,0.148631162288728,0,0.16798212819886,0,0.0895585227028483,0.290633938513962,0.383382679165211,0,0.088048434013226,2.69526550203004,2.88239906833923,2.77733353538036,0.190493682876507,0.381988425558278,0,0,0.205654985406647,0,0,0,0,0,0.646358578788889,3.57656445851882,0,0,0,0,0,0.266422179016099,0.285955987316295,0,0,0,0,0,0.301439377059586,0,0.199945982364114,0,0,0,0.239624855491583,2.29723871668228,1.42636905040718,0,0.205476322550383,0,0,4.53170748464433,7.76259269494262,6.28880877770767,0.76228387266739,0,0,0.167516265334349,0.637938751653163,6.74106321552464,0,2.07207756718018,0.24538298343828,0.500170521059677,0.271265023699736,0.831883446123229,0.713715955188647,0.157702415033935,0.117141414992713,0,0,0,0,0.184369168541703,0.60818530127658,0,0,0.206768026122887,2.37285620900479,0.853820462427555,2.42502057157008,0,0,0.248107807818777,0.153461973288062,0,0,0,0.160853921143607,1.48418066444991,0.308419387605311,0,0.0821271560138091,1.03850885836724,0.464841513839837,0,0.601519410909855,0.368323955743585,0.459257792658427,0.182091168006717,0.393373244878272,0.451199612907412,0.0770153371044148,0,0,0.527758144464379,0,0.170093705276516,0.431831832204279,1.54227252690289,0.270946437543853,0,0.254876273045038,0.831076008928724,0.447749509444357,0,0,0.256450125116389,0,0,0.412164046590889,0.183138929636687,0.165018999841176,0,1.30012049207304,0,0.193341436584244,0,0.15350367472613,0,0.322260734604821,0,0.170453254832202,0.178064071293475,0.330569830721956,0.192190067365106,1.27612712494584,0.10115778085555,0.464845549297286,0.31481234683064,0,1.54016790088044,0.532306030317022,0,0.18532421910392,0.143124886741991,0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| ||
|short_description=p5@SFR1 | |||
}} | }} |
Latest revision as of 05:15, 16 September 2015
Short description: | p5@SFR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_SFR1_5end |
Coexpression cluster: | C427_Eosinophils_CD4_Peripheral_Neutrophils_Basophils_mature_Mast |
Association with transcript: | 0bp_to_AK123954_5end |
EntrezGene: | SFR1 |
HGNC: | 29574 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 8.31e-19 | 98 |
blood island | 8.31e-19 | 98 |
bone marrow | 1.86e-18 | 76 |
bone element | 2.01e-16 | 82 |
hemolymphoid system | 4.70e-16 | 108 |
immune system | 1.45e-14 | 93 |
skeletal element | 3.78e-14 | 90 |
skeletal system | 7.65e-12 | 100 |
lateral plate mesoderm | 5.58e-11 | 203 |
connective tissue | 1.18e-10 | 371 |
musculoskeletal system | 6.29e-08 | 167 |