FFCP PHASE1:Hg19::chr14:79746108..79746120,+: Difference between revisions
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|id=chr14:79746108..79746120,+
|short_description=p10@NRXN3
|description=CAGE_peak_10_at_NRXN3_5end
|association_with_transcript=-128bp_to_ENST00000428277_5end
|En...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9369 | |EntrezGene=9369 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8010 | |HGNC=8010 | ||
|TSSclassifier=strong | |||
|UniProt=Q9HDB5 | |UniProt=Q9HDB5 | ||
|association_with_transcript=-128bp_to_ENST00000428277_5end | |||
|cluster_id=chr14:79746108..79746120,+ | |||
|coexpression_cluster_id=C11 | |||
|description=CAGE_peak_10_at_NRXN3_5end | |||
|id=chr14:79746108..79746120,+ | |||
|ontology_enrichment_celltype=CL:0002537!3.05e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0002568;1.78e-16;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002568,2.25e-16,1 | |||
|ontology_enrichment_development_v019=UBERON:0006215;3.46e-47;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3369;8.85e-17;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3369,8.86e-17,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!8.56e-19!115;UBERON:0002616!5.86e-16!59;UBERON:0001049!2.33e-15!57;UBERON:0005068!2.33e-15!57;UBERON:0006241!2.33e-15!57;UBERON:0007135!2.33e-15!57;UBERON:0003075!1.62e-13!86;UBERON:0007284!1.62e-13!86;UBERON:0000955!1.68e-13!69;UBERON:0006238!1.68e-13!69;UBERON:0005743!2.13e-13!86;UBERON:0001017!3.14e-13!82;UBERON:0002346!1.53e-12!90;UBERON:0000073!2.33e-11!94;UBERON:0001016!2.33e-11!94;UBERON:0004733!4.33e-10!12;UBERON:0002028!4.33e-10!12;UBERON:0007277!4.33e-10!12;UBERON:0003076!7.51e-10!15;UBERON:0003057!7.51e-10!15;UBERON:0002118!8.11e-10!5;UBERON:0004532!8.11e-10!5;UBERON:0004732!3.50e-09!13;UBERON:0002780!1.79e-08!41;UBERON:0001890!1.79e-08!41;UBERON:0006240!1.79e-08!41;UBERON:0000064!1.85e-08!219;UBERON:0003080!3.51e-08!42;UBERON:0002680!3.88e-08!9;UBERON:0001895!3.88e-08!9;UBERON:0010092!3.88e-08!9;UBERON:0000369!7.48e-08!4;UBERON:0002435!7.48e-08!4;UBERON:0000204!7.48e-08!4;UBERON:0010082!7.48e-08!4;UBERON:0000025!1.04e-07!194;UBERON:0003056!1.12e-07!61;UBERON:0004121!1.14e-07!169;UBERON:0000033!1.22e-07!123;UBERON:0000153!1.43e-07!129;UBERON:0007811!1.43e-07!129;UBERON:0000305!1.81e-07!7;UBERON:0000924!2.80e-07!173;UBERON:0006601!2.80e-07!173;UBERON:0001893!5.78e-07!34;UBERON:0002020!6.51e-07!34;UBERON:0003528!6.51e-07!34;UBERON:0002308!6.75e-07!9;UBERON:0000125!6.75e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0002680;5.74e-28;9!UBERON:0001895;5.74e-28;9!UBERON:0002037;5.30e-24;6!UBERON:0004733;4.39e-21;12!UBERON:0002028;4.39e-21;12!UBERON:0004732;1.71e-19;13!UBERON:0001897;6.67e-09;2!UBERON:0010225;6.67e-09;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002680,5.75e-28,9;UBERON:0001895,5.75e-28,9;UBERON:0010092,5.75e-28,9;UBERON:0002037,5.74e-24,6;UBERON:0006215,5.74e-24,6;UBERON:0004733,4.39e-21,12;UBERON:0002028,4.39e-21,12;UBERON:0007277,4.39e-21,12;UBERON:0004732,1.71e-19,13;UBERON:0003076,6.06e-17,15;UBERON:0003057,6.06e-17,15;UBERON:0001897,5.49e-09,2;UBERON:0010225,5.49e-09,2;UBERON:0000073,3.38e-07,53;UBERON:0002616,3.38e-07,53;UBERON:0001049,8.16e-07,56;UBERON:0005068,8.16e-07,56;UBERON:0006241,8.16e-07,56;UBERON:0007135,8.16e-07,56 | |||
|phase1_expression=0.181678379270557,0.428201047781966,1.12763523276777,0,0.446961094427288,0,0,0,0,0,0,0,0.263766978228454,0,0,0,0.602694528023977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0.0945348171640679,0.221729397462564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.419499436209906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.48485975847659,0.12663051166458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.910161361938026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18611685633159,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0,0.168584690078102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234817388471643,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.16344544182,0,0,0.797814349754612,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.66435439510497,0,0,0.153461973288062,0,0,0,0.482561763430822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.784349769176855,0,0,0,0,0.215915916102139,0,0,0,0.254876273045038,0,0,0,0,0,0,0,0,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143124886741991,0,0.632758849437452,0.190630193923825,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47748896947538,0.593929361665277,0.614321404198464,0,0.281338832821026,0,0,0,0.398495976502139,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0.278304294485554,0,0.260427761085233,0,0,0,0,0,0,0,0,0.885741385813839,0.120596438625408,6.10326945268333,4.09143261745531,4.13766666534966,0,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.353830258013357,0,0,0,0,0.404406797884062,0,0.234264445725339,0,0,0,0,0,0,0.063186579628488,0,0.103688191397247,0,0,0,0,0,0,0,0,0.0870592065804026,0,0,0,0,0,0.0969890164884194,0,0.225980740780532,0,0,0.253243183823515,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0,0.160753148465019,0,0,0,0,0.303747783290123,0,0,0.157363764404994,0,0,0,0,0,0,0,0,0.326587360109409,0,0,0,0,0,0,0.258565912723101,0.13223260174269,0,0,0.213574825135389,0.157204305099666,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0.610131324509816,0,0,0.332787154610557,0.310482014706917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.797525143673985,0,0,1.14241563650639,1.22061219961398,0.181848659202559,0.107410557042488,0.464033759878494,0.398095888698616,0,0,0,0,0,0,0.260994291965212,0,0,0,1.61179956973339,0,0.219284049578707,0.176689145945881,0.192914038270915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321146125482298,0,0,0,0,0.0691572524642179,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135075169236789,0,0,0.0634158101939068,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0,4.21412344456357,0.197318320688547,0,0,0,0.157115589916002,0,0.913158720509496,0,0,0.714765441766563,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33883824611688,0,0,0.463044948647668,0,0,0,0,0,0.594092800654172,0,0,0,0,0,0,0,0,1.46067277649303,0,0,0.157771562193185,0.0679914901909147,0,0,0,0,0,0,0,0,0.101988829741982,0,0,0.250707539292375,0,0,1.65833887891756,0.20686599172379,0,0.23806443146374,0,0,0,0,0,0,0,0,0.286888821570705,0,0,0,0,0,0,0.611207220914332,0.406896178315738,0,0,0 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|phase1_expression=0.181678379270557,0.428201047781966,1.12763523276777,0,0.446961094427288,0,0,0,0,0,0,0,0.263766978228454,0,0,0,0.602694528023977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0.0945348171640679,0.221729397462564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.419499436209906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.48485975847659,0.12663051166458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.910161361938026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18611685633159,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0,0.168584690078102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234817388471643,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.16344544182,0,0,0.797814349754612,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.66435439510497,0,0,0.153461973288062,0,0,0,0.482561763430822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.784349769176855,0,0,0,0,0.215915916102139,0,0,0,0.254876273045038,0,0,0,0,0,0,0,0,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143124886741991,0,0.632758849437452,0.190630193923825,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47748896947538,0.593929361665277,0.614321404198464,0,0.281338832821026,0,0,0,0.398495976502139,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0.278304294485554,0,0.260427761085233,0,0,0,0,0,0,0,0,0.885741385813839,0.120596438625408,6.10326945268333,4.09143261745531,4.13766666534966,0,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.353830258013357,0,0,0,0,0.404406797884062,0,0.234264445725339,0,0,0,0,0,0,0.063186579628488,0,0.103688191397247,0,0,0,0,0,0,0,0,0.0870592065804026,0,0,0,0,0,0.0969890164884194,0,0.225980740780532,0,0,0.253243183823515,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0,0.160753148465019,0,0,0,0,0.303747783290123,0,0,0.157363764404994,0,0,0,0,0,0,0,0,0.326587360109409,0,0,0,0,0,0,0.258565912723101,0.13223260174269,0,0,0.213574825135389,0.157204305099666,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0.610131324509816,0,0,0.332787154610557,0.310482014706917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.797525143673985,0,0,1.14241563650639,1.22061219961398,0.181848659202559,0.107410557042488,0.464033759878494,0.398095888698616,0,0,0,0,0,0,0.260994291965212,0,0,0,1.61179956973339,0,0.219284049578707,0.176689145945881,0.192914038270915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321146125482298,0,0,0,0,0.0691572524642179,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135075169236789,0,0,0.0634158101939068,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0,4.21412344456357,0.197318320688547,0,0,0,0.157115589916002,0,0.913158720509496,0,0,0.714765441766563,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33883824611688,0,0,0.463044948647668,0,0,0,0,0,0.594092800654172,0,0,0,0,0,0,0,0,1.46067277649303,0,0,0.157771562193185,0.0679914901909147,0,0,0,0,0,0,0,0,0.101988829741982,0,0,0.250707539292375,0,0,1.65833887891756,0.20686599172379,0,0.23806443146374,0,0,0,0,0,0,0,0,0.286888821570705,0,0,0,0,0,0,0.611207220914332,0.406896178315738,0,0,0 | ||
|short_description=p10@NRXN3 | |||
}} | }} |
Latest revision as of 07:04, 16 September 2015
Short description: | p10@NRXN3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_NRXN3_5end |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | -128bp_to_ENST00000428277_5end |
EntrezGene: | NRXN3 |
HGNC: | 8010 |
UniProt: | Q9HDB5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesenchymal stem cell of Wharton's jelly | 2.25e-16 | 1 |
Ontology term | p-value | n |
---|---|---|
regional part of metencephalon | 5.75e-28 | 9 |
metencephalon | 5.75e-28 | 9 |
future metencephalon | 5.75e-28 | 9 |
cerebellum | 5.74e-24 | 6 |
rhombic lip | 5.74e-24 | 6 |
segmental subdivision of hindbrain | 4.39e-21 | 12 |
hindbrain | 4.39e-21 | 12 |
presumptive hindbrain | 4.39e-21 | 12 |
segmental subdivision of nervous system | 1.71e-19 | 13 |
posterior neural tube | 6.06e-17 | 15 |
chordal neural plate | 6.06e-17 | 15 |
dorsal plus ventral thalamus | 5.49e-09 | 2 |
thalamic complex | 5.49e-09 | 2 |
regional part of nervous system | 3.38e-07 | 53 |
regional part of brain | 3.38e-07 | 53 |
neural tube | 8.16e-07 | 56 |
neural rod | 8.16e-07 | 56 |
future spinal cord | 8.16e-07 | 56 |
neural keel | 8.16e-07 | 56 |
Ontology term | p-value | n |
---|---|---|
peripheral primitive neuroectodermal tumor | 8.86e-17 | 1 |