FFCP PHASE1:Hg19::chr14:79746551..79746560,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9369 | |EntrezGene=9369 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8010 | |HGNC=8010 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-45bp_to_ENST00000555387_5end | |association_with_transcript=-45bp_to_ENST00000555387_5end | ||
|cluster_id=chr14:79746551..79746560,+ | |||
|coexpression_cluster_id=C11 | |coexpression_cluster_id=C11 | ||
|description=CAGE_peak_32_at_NRXN3_5end | |description=CAGE_peak_32_at_NRXN3_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;8.98e-131;3 | |ontology_enrichment_development_v019=UBERON:0006215;8.98e-131;3 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002616!1.29e-11!59;UBERON:0007023!2.30e-11!115;UBERON:0004733!1.28e-10!12;UBERON:0002028!1.28e-10!12;UBERON:0007277!1.28e-10!12;UBERON:0001049!3.36e-10!57;UBERON:0005068!3.36e-10!57;UBERON:0006241!3.36e-10!57;UBERON:0007135!3.36e-10!57;UBERON:0004732!8.82e-10!13;UBERON:0000955!2.10e-09!69;UBERON:0006238!2.10e-09!69;UBERON:0002680!2.24e-09!9;UBERON:0001895!2.24e-09!9;UBERON:0010092!2.24e-09!9;UBERON:0001017!7.09e-09!82;UBERON:0003076!1.94e-08!15;UBERON:0003057!1.94e-08!15;UBERON:0005743!2.42e-08!86;UBERON:0000988!2.06e-07!3;UBERON:0000073!2.62e-07!94;UBERON:0001016!2.62e-07!94;UBERON:0007029!8.34e-07!1;UBERON:0000998!8.81e-07!1;UBERON:0006868!8.81e-07!1 | |ontology_enrichment_uberon=UBERON:0002616!1.29e-11!59;UBERON:0007023!2.30e-11!115;UBERON:0004733!1.28e-10!12;UBERON:0002028!1.28e-10!12;UBERON:0007277!1.28e-10!12;UBERON:0001049!3.36e-10!57;UBERON:0005068!3.36e-10!57;UBERON:0006241!3.36e-10!57;UBERON:0007135!3.36e-10!57;UBERON:0004732!8.82e-10!13;UBERON:0000955!2.10e-09!69;UBERON:0006238!2.10e-09!69;UBERON:0002680!2.24e-09!9;UBERON:0001895!2.24e-09!9;UBERON:0010092!2.24e-09!9;UBERON:0001017!7.09e-09!82;UBERON:0003076!1.94e-08!15;UBERON:0003057!1.94e-08!15;UBERON:0005743!2.42e-08!86;UBERON:0000988!2.06e-07!3;UBERON:0000073!2.62e-07!94;UBERON:0001016!2.62e-07!94;UBERON:0007029!8.34e-07!1;UBERON:0000998!8.81e-07!1;UBERON:0006868!8.81e-07!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0002037;2.83e-66;6!UBERON:0002680;9.75e-45;9!UBERON:0001895;9.75e-45;9!UBERON:0004733;5.98e-34;12!UBERON:0002028;5.98e-34;12!UBERON:0004732;1.86e-31;13!UBERON:0000073;3.43e-07;53!UBERON:0002616;3.43e-07;53 | |ontology_enrichment_uberon_v019=UBERON:0002037;2.83e-66;6!UBERON:0002680;9.75e-45;9!UBERON:0001895;9.75e-45;9!UBERON:0004733;5.98e-34;12!UBERON:0002028;5.98e-34;12!UBERON:0004732;1.86e-31;13!UBERON:0000073;3.43e-07;53!UBERON:0002616;3.43e-07;53 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,2.83e-66,6;UBERON:0006215,2.83e-66,6;UBERON:0002680,9.75e-45,9;UBERON:0001895,9.75e-45,9;UBERON:0010092,9.75e-45,9;UBERON:0004733,5.98e-34,12;UBERON:0002028,5.98e-34,12;UBERON:0007277,5.98e-34,12;UBERON:0004732,1.86e-31,13;UBERON:0003076,1.82e-27,15;UBERON:0003057,1.82e-27,15;UBERON:0000073,1.34e-08,53;UBERON:0002616,1.34e-08,53;UBERON:0001049,3.28e-08,56;UBERON:0005068,3.28e-08,56;UBERON:0006241,3.28e-08,56;UBERON:0007135,3.28e-08,56;UBERON:0000955,6.59e-07,68;UBERON:0006238,6.59e-07,68 | |||
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|short_description=p32@NRXN3 | |short_description=p32@NRXN3 | ||
}} | }} |
Latest revision as of 07:05, 16 September 2015
Short description: | p32@NRXN3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_32_at_NRXN3_5end |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | -45bp_to_ENST00000555387_5end |
EntrezGene: | NRXN3 |
HGNC: | 8010 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cerebellum | 2.83e-66 | 6 |
rhombic lip | 2.83e-66 | 6 |
regional part of metencephalon | 9.75e-45 | 9 |
metencephalon | 9.75e-45 | 9 |
future metencephalon | 9.75e-45 | 9 |
segmental subdivision of hindbrain | 5.98e-34 | 12 |
hindbrain | 5.98e-34 | 12 |
presumptive hindbrain | 5.98e-34 | 12 |
segmental subdivision of nervous system | 1.86e-31 | 13 |
posterior neural tube | 1.82e-27 | 15 |
chordal neural plate | 1.82e-27 | 15 |
regional part of nervous system | 1.34e-08 | 53 |
regional part of brain | 1.34e-08 | 53 |
neural tube | 3.28e-08 | 56 |
neural rod | 3.28e-08 | 56 |
future spinal cord | 3.28e-08 | 56 |
neural keel | 3.28e-08 | 56 |
brain | 6.59e-07 | 68 |
future brain | 6.59e-07 | 68 |