FFCP PHASE1:Hg19::chr20:42355571..42355627,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=149699 | |EntrezGene=149699 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16198 | |HGNC=16198 | ||
|TSSclassifier=strong | |||
|UniProt=Q9H1H1 | |UniProt=Q9H1H1 | ||
|association_with_transcript=10bp_to_ENST00000373003_5end | |association_with_transcript=10bp_to_ENST00000373003_5end | ||
|cluster_id=chr20:42355571..42355627,- | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_1_at_GTSF1L_5end | |description=CAGE_peak_1_at_GTSF1L_5end | ||
|id=chr20:42355571..42355627,- | |id=chr20:42355571..42355627,- | ||
|ontology_enrichment_celltype=CL:0000875!2.53e-09!3;CL:0002396!2.53e-09!3;CL:0000359!1.24e-08!32;CL:0002594!3.63e-07!4;CL:1000413!8.66e-07!9;CL:0002393!9.38e-07!9;CL:0002397!9.38e-07!9 | |ontology_enrichment_celltype=CL:0000875!2.53e-09!3;CL:0002396!2.53e-09!3;CL:0000359!1.24e-08!32;CL:0002594!3.63e-07!4;CL:1000413!8.66e-07!9;CL:0002393!9.38e-07!9;CL:0002397!9.38e-07!9 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0007297;9.18e-26;2!UBERON:0009117;6.99e-21;10!UBERON:0005564;6.99e-21;10 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001637!1.38e-10!42;UBERON:0003509!1.38e-10!42;UBERON:0004572!1.38e-10!42;UBERON:0002771!9.28e-09!3;UBERON:0001981!1.43e-08!60;UBERON:0007500!1.43e-08!60;UBERON:0004537!1.43e-08!60;UBERON:0006965!1.43e-08!60;UBERON:0001301!8.00e-08!1;UBERON:0000055!3.14e-07!69;UBERON:0001310!3.63e-07!4;UBERON:0004872!7.25e-07!84;UBERON:0003915!8.66e-07!9;UBERON:0004700!8.66e-07!9;UBERON:0001917!8.66e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001301;6.58e-50;1!UBERON:0003135;4.67e-41;11!UBERON:0000473;8.65e-26;8!UBERON:0003101;4.27e-21;22!UBERON:0000079;4.27e-21;22!UBERON:0006947;1.12e-17;3!UBERON:0004054;1.12e-17;3!UBERON:0005904;1.29e-13;4!UBERON:0000991;1.53e-10;21!UBERON:0003133;1.93e-08;44 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001301,6.58e-50,1;UBERON:0003135,4.67e-41,11;UBERON:0000473,8.65e-26,8;UBERON:0003101,4.27e-21,22;UBERON:0000079,4.27e-21,22;UBERON:0006947,1.12e-17,3;UBERON:0004054,1.12e-17,3;UBERON:0005904,1.29e-13,4;UBERON:0000991,1.53e-10,21;UBERON:0009196,1.53e-10,21;UBERON:0009117,1.53e-10,21;UBERON:0005564,1.53e-10,21;UBERON:0003133,3.42e-10,48;UBERON:0004176,4.14e-10,22;UBERON:0003886,3.71e-09,54;UBERON:0005156,1.88e-08,59;UBERON:0000990,1.88e-08,59;UBERON:0002553,3.34e-08,61;UBERON:0005103,1.80e-07,8;UBERON:0000083,1.80e-07,8;UBERON:0009201,1.80e-07,8;UBERON:0006553,1.80e-07,8;UBERON:0003074,1.80e-07,8;UBERON:0003060,1.80e-07,8;UBERON:0000080,8.85e-07,9;UBERON:0002120,8.85e-07,9;UBERON:0004875,8.85e-07,9;UBERON:0005721,8.85e-07,9;UBERON:0005754,8.85e-07,9;UBERON:0007297,8.85e-07,9 | |||
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|short_description=p1@GTSF1L | |short_description=p1@GTSF1L | ||
}} | }} |
Latest revision as of 07:16, 16 September 2015
Short description: | p1@GTSF1L |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_GTSF1L_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 10bp_to_ENST00000373003_5end |
EntrezGene: | GTSF1L |
HGNC: | 16198 |
UniProt: | Q9H1H1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epididymis | 6.58e-50 | 1 |
male reproductive organ | 4.67e-41 | 11 |
testis | 8.65e-26 | 8 |
male organism | 4.27e-21 | 22 |
male reproductive system | 4.27e-21 | 22 |
male genital duct | 1.12e-17 | 3 |
internal male genitalia | 1.12e-17 | 3 |
duct of male reproductive system | 1.29e-13 | 4 |
gonad | 1.53e-10 | 21 |
indifferent external genitalia | 1.53e-10 | 21 |
indifferent gonad | 1.53e-10 | 21 |
gonad primordium | 1.53e-10 | 21 |
reproductive organ | 3.42e-10 | 48 |
external genitalia | 4.14e-10 | 22 |
body cavity precursor | 3.71e-09 | 54 |
reproductive structure | 1.88e-08 | 59 |
reproductive system | 1.88e-08 | 59 |
anatomical cavity | 3.34e-08 | 61 |
mesonephric epithelium | 1.80e-07 | 8 |
mesonephric tubule | 1.80e-07 | 8 |
nephric duct | 1.80e-07 | 8 |
renal duct | 1.80e-07 | 8 |
mesonephric duct | 1.80e-07 | 8 |
pronephric duct | 1.80e-07 | 8 |
mesonephros | 8.85e-07 | 9 |
pronephros | 8.85e-07 | 9 |
nephrogenic cord | 8.85e-07 | 9 |
pronephric mesoderm | 8.85e-07 | 9 |
rostral part of nephrogenic cord | 8.85e-07 | 9 |
presumptive pronephric mesoderm | 8.85e-07 | 9 |