FFCP PHASE1:Hg19::chr13:100632998..100633001,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt=B4DP89 | |UniProt=B4DP89 | ||
|association_with_transcript=-418bp_to_AK298232_5end | |association_with_transcript=-418bp_to_AK298232_5end | ||
|cluster_id=chr13:100632998..100633001,+ | |||
|coexpression_cluster_id=C11 | |||
|description=CAGE_peak_5_at_AK298232_5end | |description=CAGE_peak_5_at_AK298232_5end | ||
|id=chr13:100632998..100633001,+ | |id=chr13:100632998..100633001,+ | ||
|ontology_enrichment_celltype=CL:0002575!1.74e-09!2;CL:0002603!9.88e-07!3 | |ontology_enrichment_celltype=CL:0002575!1.74e-09!2;CL:0002603!9.88e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002575;8.10e-26;2!CL:0000669;1.21e-13;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002575,9.18e-26,2;CL:0000669,1.29e-13,4 | |||
|ontology_enrichment_development_v019=UBERON:0006215;4.20e-147;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002680!4.94e-22!9;UBERON:0001895!4.94e-22!9;UBERON:0010092!4.94e-22!9;UBERON:0004733!2.76e-21!12;UBERON:0002028!2.76e-21!12;UBERON:0007277!2.76e-21!12;UBERON:0004732!1.53e-19!13;UBERON:0002037!3.09e-18!6;UBERON:0006215!3.09e-18!6;UBERON:0003076!9.47e-17!15;UBERON:0003057!9.47e-17!15;UBERON:0005743!8.87e-15!86;UBERON:0000073!1.73e-14!94;UBERON:0001016!1.73e-14!94;UBERON:0002346!3.44e-14!90;UBERON:0001017!3.92e-14!82;UBERON:0001049!5.59e-14!57;UBERON:0005068!5.59e-14!57;UBERON:0006241!5.59e-14!57;UBERON:0007135!5.59e-14!57;UBERON:0000955!7.56e-14!69;UBERON:0006238!7.56e-14!69;UBERON:0003075!1.92e-13!86;UBERON:0007284!1.92e-13!86;UBERON:0002616!2.17e-13!59;UBERON:0000033!6.02e-10!123;UBERON:0000153!2.90e-09!129;UBERON:0007811!2.90e-09!129;UBERON:0000924!5.57e-09!173;UBERON:0006601!5.57e-09!173;UBERON:0004121!2.17e-08!169;UBERON:0007023!6.36e-07!115 | |ontology_enrichment_uberon=UBERON:0002680!4.94e-22!9;UBERON:0001895!4.94e-22!9;UBERON:0010092!4.94e-22!9;UBERON:0004733!2.76e-21!12;UBERON:0002028!2.76e-21!12;UBERON:0007277!2.76e-21!12;UBERON:0004732!1.53e-19!13;UBERON:0002037!3.09e-18!6;UBERON:0006215!3.09e-18!6;UBERON:0003076!9.47e-17!15;UBERON:0003057!9.47e-17!15;UBERON:0005743!8.87e-15!86;UBERON:0000073!1.73e-14!94;UBERON:0001016!1.73e-14!94;UBERON:0002346!3.44e-14!90;UBERON:0001017!3.92e-14!82;UBERON:0001049!5.59e-14!57;UBERON:0005068!5.59e-14!57;UBERON:0006241!5.59e-14!57;UBERON:0007135!5.59e-14!57;UBERON:0000955!7.56e-14!69;UBERON:0006238!7.56e-14!69;UBERON:0003075!1.92e-13!86;UBERON:0007284!1.92e-13!86;UBERON:0002616!2.17e-13!59;UBERON:0000033!6.02e-10!123;UBERON:0000153!2.90e-09!129;UBERON:0007811!2.90e-09!129;UBERON:0000924!5.57e-09!173;UBERON:0006601!5.57e-09!173;UBERON:0004121!2.17e-08!169;UBERON:0007023!6.36e-07!115 | ||
|ontology_enrichment_uberon_v019=UBERON:0002037;2.92e-74;6!UBERON:0002680;6.09e-50;9!UBERON:0001895;6.09e-50;9!UBERON:0004733;9.17e-38;12!UBERON:0002028;9.17e-38;12!UBERON:0004732;5.97e-35;13!UBERON:0000073;7.96e-07;53!UBERON:0002616;7.96e-07;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,2.58e-74,6;UBERON:0006215,2.58e-74,6;UBERON:0002680,5.60e-50,9;UBERON:0001895,5.60e-50,9;UBERON:0010092,5.60e-50,9;UBERON:0004733,8.61e-38,12;UBERON:0002028,8.61e-38,12;UBERON:0007277,8.61e-38,12;UBERON:0004732,5.63e-35,13;UBERON:0003076,1.81e-30,15;UBERON:0003057,1.81e-30,15;UBERON:0000073,3.61e-09,53;UBERON:0002616,3.61e-09,53;UBERON:0001049,9.89e-09,56;UBERON:0005068,9.89e-09,56;UBERON:0006241,9.89e-09,56;UBERON:0007135,9.89e-09,56;UBERON:0000955,2.91e-07,68;UBERON:0006238,2.91e-07,68 | |||
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| ||
|short_description=p5@AK298232 | |short_description=p5@AK298232 | ||
}} | }} |
Latest revision as of 07:44, 16 September 2015
Short description: | p5@AK298232 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_AK298232_5end |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | -418bp_to_AK298232_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
central nervous system pericyte | 9.18e-26 | 2 |
pericyte cell | 1.29e-13 | 4 |
Ontology term | p-value | n |
---|---|---|
cerebellum | 2.58e-74 | 6 |
rhombic lip | 2.58e-74 | 6 |
regional part of metencephalon | 5.60e-50 | 9 |
metencephalon | 5.60e-50 | 9 |
future metencephalon | 5.60e-50 | 9 |
segmental subdivision of hindbrain | 8.61e-38 | 12 |
hindbrain | 8.61e-38 | 12 |
presumptive hindbrain | 8.61e-38 | 12 |
segmental subdivision of nervous system | 5.63e-35 | 13 |
posterior neural tube | 1.81e-30 | 15 |
chordal neural plate | 1.81e-30 | 15 |
regional part of nervous system | 3.61e-09 | 53 |
regional part of brain | 3.61e-09 | 53 |
neural tube | 9.89e-09 | 56 |
neural rod | 9.89e-09 | 56 |
future spinal cord | 9.89e-09 | 56 |
neural keel | 9.89e-09 | 56 |
brain | 2.91e-07 | 68 |
future brain | 2.91e-07 | 68 |