FFCP PHASE1:Hg19::chr3:157824202..157824211,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6474 | |EntrezGene=6474 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10854 | |HGNC=10854 | ||
|TSSclassifier=strong | |||
|UniProt=O60902 | |UniProt=O60902 | ||
|association_with_transcript=80bp_to_ENST00000389589_5end | |association_with_transcript=80bp_to_ENST00000389589_5end | ||
|cluster_id=chr3:157824202..157824211,- | |||
|coexpression_cluster_id=C126 | |||
|description=CAGE_peak_3_at_SHOX2_5end | |description=CAGE_peak_3_at_SHOX2_5end | ||
|id=chr3:157824202..157824211,- | |id=chr3:157824202..157824211,- | ||
|ontology_enrichment_celltype=CL:0000197!7.58e-07!6;CL:0000098!7.58e-07!6;CL:0002167!7.58e-07!6 | |ontology_enrichment_celltype=CL:0000197!7.58e-07!6;CL:0000098!7.58e-07!6;CL:0002167!7.58e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0000123;4.26e-14;2!CL:0000242;4.26e-14;2!CL:0000062;2.51e-11;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,4.26e-14,2;CL:0000062,2.59e-09,11;CL:0000375,2.59e-09,11;CL:0000335,2.59e-09,11 | |||
|ontology_enrichment_development_v019=CL:0000335;2.73e-09;11!UBERON:0003099;4.89e-08;1!UBERON:0003852;4.89e-08;1!UBERON:0006222;2.31e-07;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002199!4.51e-07!45;UBERON:0002416!4.51e-07!45 | |||
|ontology_enrichment_uberon_v019=UBERON:0005705;4.89e-08;1!UBERON:0008193;4.89e-08;1!UBERON:0010912;4.89e-08;1!UBERON:0002514;4.89e-08;1!UBERON:0003457;4.89e-08;1!UBERON:0008907;4.89e-08;1!UBERON:0008001;4.89e-08;1!UBERON:0007213;4.89e-08;1!UBERON:0009891;4.89e-08;1!UBERON:0007914;4.89e-08;1!UBERON:0007375;4.89e-08;1!UBERON:0003323;4.89e-08;1!UBERON:0010258;4.89e-08;1!UBERON:0005253;4.89e-08;1!UBERON:0007842;4.89e-08;1!UBERON:0002397;4.89e-08;1!UBERON:0003113;4.89e-08;1!UBERON:0003277;4.89e-08;1!UBERON:0001709;4.89e-08;1!UBERON:0002244;4.89e-08;1!UBERON:0005620;4.89e-08;1!UBERON:0010364;4.89e-08;1!UBERON:0004288;4.89e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005705,4.89e-08,1;UBERON:0008193,4.89e-08,1;UBERON:0010912,4.89e-08,1;UBERON:0002514,4.89e-08,1;UBERON:0003457,4.89e-08,1;UBERON:0008907,4.89e-08,1;UBERON:0008001,4.89e-08,1;UBERON:0007213,4.89e-08,1;UBERON:0009891,4.89e-08,1;UBERON:0007914,4.89e-08,1;UBERON:0009292,4.89e-08,1;UBERON:0003099,4.89e-08,1;UBERON:0007375,4.89e-08,1;UBERON:0003323,4.89e-08,1;UBERON:0010258,4.89e-08,1;UBERON:0007842,4.89e-08,1;UBERON:0009494,4.89e-08,1;UBERON:0010042,4.89e-08,1;UBERON:0010045,4.89e-08,1;UBERON:0010259,4.89e-08,1;UBERON:0010359,4.89e-08,1;UBERON:0009526,4.89e-08,1;UBERON:0002397,4.89e-08,1;UBERON:0003113,4.89e-08,1;UBERON:0003277,4.89e-08,1;UBERON:0001709,4.89e-08,1;UBERON:0004066,4.89e-08,1;UBERON:0002244,4.89e-08,1;UBERON:0005620,4.89e-08,1;UBERON:0004362,4.89e-08,1;UBERON:0010364,4.89e-08,1;UBERON:0010046,4.89e-08,1;UBERON:0005868,4.89e-08,1;UBERON:0007238,4.89e-08,1;UBERON:0004288,4.89e-08,1;UBERON:0004068,4.89e-08,1;UBERON:0010334,4.89e-08,1;UBERON:0003852,4.89e-08,1;UBERON:0010253,4.89e-08,1 | |||
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| ||
|short_description=p3@SHOX2 | |short_description=p3@SHOX2 | ||
}} | }} |
Latest revision as of 08:16, 16 September 2015
Short description: | p3@SHOX2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SHOX2_5end |
Coexpression cluster: | C126_gastrointestinal_argyrophil_smallcell_merkel_bile_insula_brain |
Association with transcript: | 80bp_to_ENST00000389589_5end |
EntrezGene: | SHOX2 |
HGNC: | 10854 |
UniProt: | O60902 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 4.26e-14 | 2 |
osteoblast | 2.59e-09 | 11 |
osteoprogenitor cell | 2.59e-09 | 11 |
mesenchyme condensation cell | 2.59e-09 | 11 |