FFCP PHASE1:Hg19::chr12:110937429..110937445,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51699 | |EntrezGene=51699 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14340 | |HGNC=14340 | ||
|TSSclassifier=strong | |||
|UniProt=Q05DG7 | |UniProt=Q05DG7 | ||
|association_with_transcript=-75bp_to_ENST00000552130_5end | |association_with_transcript=-75bp_to_ENST00000552130_5end | ||
|cluster_id=chr12:110937429..110937445,- | |||
|description=CAGE_peak_7_at_VPS29_5end | |description=CAGE_peak_7_at_VPS29_5end | ||
|id=chr12:110937429..110937445,- | |id=chr12:110937429..110937445,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
| | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0001045;2.46e-12;1!UBERON:0005425;2.46e-12;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon_v019=UBERON:0000029;2.46e-12;1!UBERON:0001154;2.46e-12;1!UBERON:0000941;2.46e-12;1!UBERON:0001153;2.46e-12;1!UBERON:0002171;2.46e-12;1!UBERON:0001785;2.46e-12;1!UBERON:0002464;2.46e-12;1!UBERON:0004904;2.46e-12;1!UBERON:0009854;2.46e-12;1!UBERON:0001021;2.46e-12;1!UBERON:0006518;2.46e-12;1!UBERON:0008949;2.46e-12;1!UBERON:0000101;2.46e-12;1!UBERON:0002167;2.46e-12;1!UBERON:0004907;6.80e-10;5!UBERON:0000059;1.12e-09;11!UBERON:0003714;8.52e-07;2!UBERON:0005162;8.52e-07;2!UBERON:0000122;8.52e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000029,1.25e-12,1;UBERON:0002171,1.75e-12,1;UBERON:0006518,1.75e-12,1;UBERON:0008949,1.75e-12,1;UBERON:0000101,1.75e-12,1;UBERON:0002167,1.75e-12,1;UBERON:0000941,3.08e-12,1;UBERON:0001785,3.08e-12,1;UBERON:0002464,3.08e-12,1;UBERON:0004904,3.08e-12,1;UBERON:0001021,3.08e-12,1;UBERON:0003902,3.08e-12,1;UBERON:0005425,3.08e-12,1;UBERON:0001154,4.31e-12,1;UBERON:0001153,4.31e-12,1;UBERON:0001045,4.31e-12,1;UBERON:0004907,8.49e-10,5;UBERON:0000059,1.12e-09,11;UBERON:0003714,9.54e-07,2;UBERON:0005162,9.54e-07,2;UBERON:0000122,9.54e-07,2 | |||
|phase1_expression=0.181678379270557,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0.204000691244253,0,0,0.410623275218653,0.125542639594803,0,0.0821005894499457,0,0,0,0,0,0.30120591877825,0,0.232401601740905,0,0,0,0,0,0.447830948479849,0.32389366601898,0,0.581592955118259,0.377875943688809,0.242584061187816,0,0,0.309706370895104,0,1.0246428261164,0,0,0,0,0.376484679085209,0,0.224723484445085,0,0,0,0.329851300186716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182664153764634,1.75996244461323,0.546138611262131,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0.294605907474837,0,0,0.512365278902701,0.390178042679635,0.657751618414705,0,0.289803085735052,0.296573126324121,0,0,0.226618685395132,0.383220493601921,0,0,0,0,0,0.301150238155546,0.255973222308837,0,0,0.821127996921047,0,0.802320587350522,0,0,0.670700859703636,0,0,0,0.144846518960824,0,0,0.189069634328136,0,0.175669571386252,0.130979075497713,0,0,0,0.522389211897802,0,0,0,0,0,0,0,0,0,0,0.208994966536811,0.258416759169329,0,0,0.402829317109147,0,0,0,0,0.0892997282840798,0,0.225222960966644,0,0,0,0,0,0,0,0,0.264818361626438,0,0,0,0,0,0,0.134710672069688,0.490385709340376,0,0,0,0,0,0,0.23486899728753,0,0.140450806702248,0,0.245668634623536,0.103325781175765,0,0.247266929278557,0,0,0,0.125118519871964,0,0,0,0.150238058906597,0,0.538168907066586,0,0,0,0,0.257640540045629,0,0.337552664482532,0.0974370051611986,0.252433774244115,0.0920498986422993,0,0.710019185033229,0.10075209822764,0,0,0.272746120590835,0,0,0,0,0,0,0,1.56449532329816,0,0,0.464367928031979,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0.122988438543114,0,0.109750285408626,0,0.100528972411631,0,0,0,0,0.115930404975077,0,0,0.462985512576611,0.380508304469197,0.790204397959275,0,0.492434012174795,0,0.148631162288728,0,0,0,0,0,0.383382679165211,0,0,0,0.288239906833923,0.12624243342638,0.063497894292169,0,0,0,0.102827492703324,0,0.285826432630578,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,2.10833939483032,0.239624855491583,0,0,0,0.205476322550383,0.179060963239896,0,0,0.215627574859517,0.128343036279748,0,0,0,0,0.637938751653163,0,0,0,0.12269149171914,0,0,0.207970861530807,0,0,0.117141414992713,0,0,0,0,0,0.173767228936166,0,0,0.206768026122887,0,0,0,0,0,0,0.306923946576125,0,0.128139149255701,0,0,0,0,0,0,0,0.232420756919918,0.241718899183244,0.200506470303285,0.184161977871793,0,0,0,0,0.0770153371044148,0,0,0,1.13733384070897,0.170093705276516,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,5.15205058238611,0.0915694648183434,0.082509499920588,0,0,0,0,0.154048617114644,0.307007349452259,0.137836572484531,0.107420244868274,0,0,0.0890320356467374,0,0.768760269460425,0.255225424989168,0,0,0,0,0,0,0,0,0.286249773483982,0,0.316379424718726,0.38126038784765,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0.487426979262569,0,0,0,0,0,0,0.876901770507525,0,0,0,0.30982349809975,0,0,0,0,0,0.211107635297664,0.329294892959902,0,0,0,0,0,5.08376524194607,0,0,0,0,0,0.764637207142375,0.569647187174163,0.238231775457789,0,0,0.540031437238115,0.79312517629427,0,0,0,0,0.144269212976445,0.355709216742071,0.159426272728822,0,0,0.211673582723883,0,0.280797178113459,0.456469358066384,0.156679895773023,5.01268954180134,0,0,0.605399121573143,0.425846237690326,0.343505344755765,0,0,0,0,0,0,0.540911356951966,0.33307196799782,1.4098700508785,0,0,0.121360521749513,0,0,0,0,0,0,0.140669416410513,0.222617410045812,0.16480387422676,0.422250816255987,0.597743964753209,1.10513566212459,0.755798243562828,0,0,0.311039587661807,0.0898683511473268,0,0.511572370226872,0,0,0,0.969332746095218,0.0927680981618513,0,0,0,0,0.227586896570999,0,0,0.344743373241465,0.583209226766509,0.347249989866585,0,0.241192877250816,1.52581736317083,0.663475559587348,0.295547618953547,0,0,0,0.0769502585037971,0.113942055847001,0,0.0897576444097721,0,0,0,0,0,0,0.166211681900156,0,0.19606253431774,0.167821586975843,0,0,0.210998064528027,0.163232808159148,0,0.216388639742091,0,0.0884575645033392,1.83309043480088,0,0.123563938946503,0.104421949505455,0,0,0.468528891450678,0.182454789215666,0,0.242780379534093,0,0,0.30607276163049,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0.51595809741485,0.290268993867255,0.146178634172371,0.246346371159628,0.193978032976839,0,0.225980740780532,0,0,0,0.195551382734803,0,0.213452994739353,0,0,0.229073192331831,0.343189995723929,0,0,0.471388069233591,0,0.104602846312333,0,0,0,0.273810757783986,0,0,0,0.279282401272254,0,0.717873024576814,0,0.429226048136571,0,0.0671834724867263,0.360299883542404,0,0,0.0824158583811665,0.0674035438541849,0.0984274815147488,0,0,0.136203406111576,0.321506296930038,0,0.415440338029185,0.2249738915515,0,0,0,0.0788057072991982,0.0524545881349981,0,0.179287339332845,0,0,0,0,0,0,0,0,0.082092520749339,0.340776043570843,0.113312091520126,0.146552233678082,0,0.387848869084652,0,0,0,0.106787412567695,0.157204305099666,1.65695622138878,1.9846640872478,0.197611631897944,0,0,0,0.2506898940227,0,0,0,0,0.122026264901963,0.250381861413,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| ||
|short_description=p7@VPS29 | |short_description=p7@VPS29 | ||
}} | }} |
Latest revision as of 08:40, 16 September 2015
Short description: | p7@VPS29 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_VPS29_5end |
Coexpression cluster: | NA |
Association with transcript: | -75bp_to_ENST00000552130_5end |
EntrezGene: | VPS29 |
HGNC: | 14340 |
UniProt: | Q05DG7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymph node | 1.25e-12 | 1 |
lower lobe of right lung | 1.75e-12 | 1 |
right lung lobe | 1.75e-12 | 1 |
lower lobe of lung | 1.75e-12 | 1 |
lobe of lung | 1.75e-12 | 1 |
right lung | 1.75e-12 | 1 |
cranial nerve II | 3.08e-12 | 1 |
cranial nerve | 3.08e-12 | 1 |
nerve trunk | 3.08e-12 | 1 |
nerve connecting eye with brain | 3.08e-12 | 1 |
nerve | 3.08e-12 | 1 |
retinal neural layer | 3.08e-12 | 1 |
presumptive neural retina | 3.08e-12 | 1 |
vermiform appendix | 4.31e-12 | 1 |
caecum | 4.31e-12 | 1 |
midgut | 4.31e-12 | 1 |
lower digestive tract | 8.49e-10 | 5 |
large intestine | 1.12e-09 | 11 |
neural tissue | 9.54e-07 | 2 |
multi cell component structure | 9.54e-07 | 2 |
neuron projection bundle | 9.54e-07 | 2 |