FFCP PHASE1:Hg19::chr11:122709200..122709215,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=56253 | |EntrezGene=56253 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24313 | |HGNC=24313 | ||
|TSSclassifier=strong | |||
|UniProt=O95727 | |UniProt=O95727 | ||
|association_with_transcript=0bp_to_ENST00000227348_5end | |association_with_transcript=0bp_to_ENST00000227348_5end | ||
|cluster_id=chr11:122709200..122709215,+ | |||
|coexpression_cluster_id=C17 | |coexpression_cluster_id=C17 | ||
|description=CAGE_peak_2_at_CRTAM_5end | |description=CAGE_peak_2_at_CRTAM_5end | ||
|id=chr11:122709200..122709215,+ | |id=chr11:122709200..122709215,+ | ||
|ontology_enrichment_celltype=CL:0000738!2.08e-23!140;CL:0000037!6.84e-18!172;CL:0000566!6.84e-18!172;CL:0000625!8.37e-18!11;CL:0000791!6.25e-17!18;CL:0000789!6.25e-17!18;CL:0002420!6.25e-17!18;CL:0002419!6.25e-17!18;CL:0000790!6.25e-17!18;CL:0000988!7.42e-16!182;CL:0002032!3.87e-15!165;CL:0000837!3.87e-15!165;CL:0002031!7.46e-14!124;CL:0002087!8.67e-13!119;CL:0000084!1.75e-12!25;CL:0000827!1.75e-12!25;CL:0000838!1.36e-11!52;CL:0000542!3.15e-11!53;CL:0000051!3.15e-11!53;CL:0000766!1.89e-07!76;CL:0002274!7.44e-07!5;CL:0000457!7.44e-07!5;CL:0002191!7.44e-07!5;CL:0000097!7.44e-07!5;CL:0000831!7.44e-07!5;CL:0002028!7.44e-07!5 | |ontology_enrichment_celltype=CL:0000738!2.08e-23!140;CL:0000037!6.84e-18!172;CL:0000566!6.84e-18!172;CL:0000625!8.37e-18!11;CL:0000791!6.25e-17!18;CL:0000789!6.25e-17!18;CL:0002420!6.25e-17!18;CL:0002419!6.25e-17!18;CL:0000790!6.25e-17!18;CL:0000988!7.42e-16!182;CL:0002032!3.87e-15!165;CL:0000837!3.87e-15!165;CL:0002031!7.46e-14!124;CL:0002087!8.67e-13!119;CL:0000084!1.75e-12!25;CL:0000827!1.75e-12!25;CL:0000838!1.36e-11!52;CL:0000542!3.15e-11!53;CL:0000051!3.15e-11!53;CL:0000766!1.89e-07!76;CL:0002274!7.44e-07!5;CL:0000457!7.44e-07!5;CL:0002191!7.44e-07!5;CL:0000097!7.44e-07!5;CL:0000831!7.44e-07!5;CL:0002028!7.44e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0000625;4.33e-34;11!CL:0000791;2.10e-23;18!CL:0000789;2.10e-23;18!CL:0002419;2.10e-23;18!CL:0000084;1.10e-18;25!CL:0000094;2.10e-12;8!CL:0000623;1.78e-10;3!CL:0000226;1.92e-09;3!CL:0000842;1.92e-09;3!CL:0000542;1.99e-09;53!CL:0000767;2.22e-09;3!CL:0000081;7.81e-09;11!CL:0002619;1.22e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000625,4.28e-34,11;CL:0000791,2.17e-23,18;CL:0000789,2.17e-23,18;CL:0002420,2.17e-23,18;CL:0002419,2.17e-23,18;CL:0000790,2.17e-23,18;CL:0000738,7.71e-22,136;CL:0000084,1.22e-18,25;CL:0000827,1.22e-18,25;CL:0000838,2.65e-17,52;CL:0000037,5.21e-17,168;CL:0000542,7.03e-17,53;CL:0000051,7.03e-17,53;CL:0000988,1.21e-15,177;CL:0002032,1.00e-13,161;CL:0000837,1.00e-13,161;CL:0002087,3.03e-13,115;CL:0000094,1.52e-12,8;CL:0002031,2.31e-11,120;CL:0000623,1.90e-10,3;CL:0000825,1.90e-10,3;CL:0000767,1.92e-09,3;CL:0000226,1.98e-09,3;CL:0000842,1.98e-09,3;CL:0000081,6.22e-09,11;CL:0002619,1.44e-08,3 | |||
|ontology_enrichment_development_v019=CL:0000790;2.10e-23;18!CL:0000051;1.99e-09;53 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.89e-22!115;UBERON:0002390!8.16e-12!102;UBERON:0003061!8.16e-12!102;UBERON:0002193!2.29e-11!112;UBERON:0000178!5.69e-11!15;UBERON:0000179!5.69e-11!15;UBERON:0000463!5.69e-11!15;UBERON:0004177!2.58e-07!7 | |ontology_enrichment_uberon=UBERON:0007023!4.89e-22!115;UBERON:0002390!8.16e-12!102;UBERON:0003061!8.16e-12!102;UBERON:0002193!2.29e-11!112;UBERON:0000178!5.69e-11!15;UBERON:0000179!5.69e-11!15;UBERON:0000463!5.69e-11!15;UBERON:0004177!2.58e-07!7 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;7.32e-22;15!UBERON:0000179;7.32e-22;15!UBERON:0000463;7.32e-22;15!UBERON:0002390;4.68e-16;32!UBERON:0002193;1.03e-11;42!UBERON:0004177;1.42e-09;5!UBERON:0005057;1.42e-09;5!UBERON:0002370;4.32e-07;2!UBERON:0005058;4.32e-07;2!UBERON:0009113;4.32e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,6.27e-22,15;UBERON:0000179,6.27e-22,15;UBERON:0000463,6.27e-22,15;UBERON:0002193,3.21e-11,108;UBERON:0002390,1.19e-10,98;UBERON:0003061,1.19e-10,98;UBERON:0004177,2.50e-10,7;UBERON:0005057,2.50e-10,7;UBERON:0002370,2.46e-07,4;UBERON:0005058,2.46e-07,4;UBERON:0009113,2.46e-07,4;UBERON:0003295,2.46e-07,4;UBERON:0005562,2.46e-07,4 | |||
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| ||
|short_description=p2@CRTAM | |short_description=p2@CRTAM | ||
}} | }} |
Latest revision as of 08:44, 16 September 2015
Short description: | p2@CRTAM |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CRTAM_5end |
Coexpression cluster: | C17_Mast_CD14_Monocytederived_Lymphatic_Smooth_mesenchymal_Macrophage |
Association with transcript: | 0bp_to_ENST00000227348_5end |
EntrezGene: | CRTAM |
HGNC: | 24313 |
UniProt: | O95727 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD8-positive, alpha-beta T cell | 4.28e-34 | 11 |
mature alpha-beta T cell | 2.17e-23 | 18 |
alpha-beta T cell | 2.17e-23 | 18 |
immature T cell | 2.17e-23 | 18 |
mature T cell | 2.17e-23 | 18 |
immature alpha-beta T cell | 2.17e-23 | 18 |
leukocyte | 7.71e-22 | 136 |
T cell | 1.22e-18 | 25 |
pro-T cell | 1.22e-18 | 25 |
lymphoid lineage restricted progenitor cell | 2.65e-17 | 52 |
hematopoietic stem cell | 5.21e-17 | 168 |
lymphocyte | 7.03e-17 | 53 |
common lymphoid progenitor | 7.03e-17 | 53 |
hematopoietic cell | 1.21e-15 | 177 |
hematopoietic oligopotent progenitor cell | 1.00e-13 | 161 |
hematopoietic multipotent progenitor cell | 1.00e-13 | 161 |
nongranular leukocyte | 3.03e-13 | 115 |
granulocyte | 1.52e-12 | 8 |
hematopoietic lineage restricted progenitor cell | 2.31e-11 | 120 |
natural killer cell | 1.90e-10 | 3 |
pro-NK cell | 1.90e-10 | 3 |
basophil | 1.92e-09 | 3 |
single nucleate cell | 1.98e-09 | 3 |
mononuclear cell | 1.98e-09 | 3 |
blood cell | 6.22e-09 | 11 |
adult endothelial progenitor cell | 1.44e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
blood | 6.27e-22 | 15 |
haemolymphatic fluid | 6.27e-22 | 15 |
organism substance | 6.27e-22 | 15 |
hemolymphoid system | 3.21e-11 | 108 |
hematopoietic system | 1.19e-10 | 98 |
blood island | 1.19e-10 | 98 |
hemopoietic organ | 2.50e-10 | 7 |
immune organ | 2.50e-10 | 7 |
thymus | 2.46e-07 | 4 |
hemolymphoid system gland | 2.46e-07 | 4 |
thymic region | 2.46e-07 | 4 |
pharyngeal gland | 2.46e-07 | 4 |
thymus primordium | 2.46e-07 | 4 |