FFCP PHASE1:Hg19::chr10:112657988..112657991,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=27250 | |EntrezGene=27250 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=8763 | |HGNC=8763 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=70bp_to_AL049932_5end | |association_with_transcript=70bp_to_AL049932_5end | ||
|cluster_id=chr10:112657988..112657991,+ | |||
|coexpression_cluster_id=C190 | |coexpression_cluster_id=C190 | ||
|description=CAGE_peak_35_at_PDCD4_5end | |description=CAGE_peak_35_at_PDCD4_5end | ||
|id=chr10:112657988..112657991,+ | |id=chr10:112657988..112657991,+ | ||
|ontology_enrichment_celltype=CL:0002623;9.90e-11;3!CL:0000622;6.04e-07;5 | |ontology_enrichment_celltype=CL:0002623!6.09e-08!3 | ||
| | |ontology_enrichment_celltype_v019=CL:0002623;9.90e-11;3!CL:0000622;6.04e-07;5 | ||
|ontology_enrichment_disease=DOID:3307;2.05e-15;2 | |ontology_enrichment_celltype_v019_2=CL:0002623,1.20e-10,3;CL:0000622,6.77e-07,5 | ||
|ontology_enrichment_uberon=UBERON:0000941;2.37e-29;1!UBERON:0001785;2.37e-29;1!UBERON:0002464;2.37e-29;1!UBERON:0004904;2.37e-29;1!UBERON:0001021;2.37e-29;1!UBERON:0000341;2.05e-15;2!UBERON:0003714;2.05e-15;2!UBERON:0005162;2.05e-15;2!UBERON:0000122;2.05e-15;2!UBERON:0001041;4.21e-09;14!UBERON:0004921;2.36e-08;33!UBERON:0000945;5.08e-07;5!UBERON:0010039;5.08e-07;5!UBERON:0002046;6.04e-07;5 | |ontology_enrichment_development_v019=UBERON:0005425;2.37e-29;1!UBERON:0003056;9.90e-11;3!UBERON:0007123;6.04e-07;5 | ||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3307;2.05e-15;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3307,1.54e-15,2 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;2.37e-29;1!UBERON:0001785;2.37e-29;1!UBERON:0002464;2.37e-29;1!UBERON:0004904;2.37e-29;1!UBERON:0001021;2.37e-29;1!UBERON:0000341;2.05e-15;2!UBERON:0003714;2.05e-15;2!UBERON:0005162;2.05e-15;2!UBERON:0000122;2.05e-15;2!UBERON:0001041;4.21e-09;14!UBERON:0004921;2.36e-08;33!UBERON:0000945;5.08e-07;5!UBERON:0010039;5.08e-07;5!UBERON:0002046;6.04e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,3.16e-29,1;UBERON:0001785,3.16e-29,1;UBERON:0002464,3.16e-29,1;UBERON:0004904,3.16e-29,1;UBERON:0001021,3.16e-29,1;UBERON:0003902,3.16e-29,1;UBERON:0005425,3.16e-29,1;UBERON:0000341,2.05e-15,2;UBERON:0003714,2.37e-15,2;UBERON:0005162,2.37e-15,2;UBERON:0000122,2.37e-15,2;UBERON:0001781,2.43e-08,4;UBERON:0002046,5.70e-07,5;UBERON:0004117,5.70e-07,5;UBERON:0007689,5.70e-07,5;UBERON:0007123,5.70e-07,5;UBERON:0003091,5.70e-07,5 | |||
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| ||
|short_description=p35@PDCD4 | |short_description=p35@PDCD4 | ||
}} | }} |
Latest revision as of 09:29, 16 September 2015
Short description: | p35@PDCD4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_35_at_PDCD4_5end |
Coexpression cluster: | C190_colon_small_rectum_duodenum_appendix_temporal_oral |
Association with transcript: | 70bp_to_AL049932_5end |
EntrezGene: | PDCD4 |
HGNC: | 8763 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
acinar cell of salivary gland | 1.20e-10 | 3 |
acinar cell | 6.77e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 3.16e-29 | 1 |
cranial nerve | 3.16e-29 | 1 |
nerve trunk | 3.16e-29 | 1 |
nerve connecting eye with brain | 3.16e-29 | 1 |
nerve | 3.16e-29 | 1 |
retinal neural layer | 3.16e-29 | 1 |
presumptive neural retina | 3.16e-29 | 1 |
throat | 2.05e-15 | 2 |
neural tissue | 2.37e-15 | 2 |
multi cell component structure | 2.37e-15 | 2 |
neuron projection bundle | 2.37e-15 | 2 |
layer of retina | 2.43e-08 | 4 |
thyroid gland | 5.70e-07 | 5 |
pharyngeal pouch | 5.70e-07 | 5 |
thyroid diverticulum | 5.70e-07 | 5 |
pharyngeal pouch 2 | 5.70e-07 | 5 |
thyroid primordium | 5.70e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
teratoma | 1.54e-15 | 2 |