FFCP PHASE1:Hg19::chr1:117452669..117452748,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5738 | |EntrezGene=5738 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9601 | |HGNC=9601 | ||
|TSSclassifier=strong | |||
|UniProt=Q9P2B2 | |UniProt=Q9P2B2 | ||
|association_with_transcript=0bp_to_ENST00000393203,ENST00000544471,NM_020440,uc001egv.1_5end | |association_with_transcript=0bp_to_ENST00000393203,ENST00000544471,NM_020440,uc001egv.1_5end | ||
|cluster_id=chr1:117452669..117452748,+ | |||
|description=CAGE_peak_2_at_PTGFRN_5end | |description=CAGE_peak_2_at_PTGFRN_5end | ||
|id=chr1:117452669..117452748,+ | |id=chr1:117452669..117452748,+ | ||
|ontology_enrichment_celltype=CL:0000055!1.50e-09!180;CL:0002494!7.44e-08!16;CL:0000220!1.65e-07!246;CL:0002321!1.69e-07!248 | |ontology_enrichment_celltype=CL:0000055!1.50e-09!180;CL:0002494!7.44e-08!16;CL:0000220!1.65e-07!246;CL:0002321!1.69e-07!248 | ||
|ontology_enrichment_celltype_v019=CL:0002494;6.41e-08;16 | |||
|ontology_enrichment_celltype_v019_2=CL:0002494,5.22e-08,16 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!7.33e-16!659;UBERON:0007100!4.95e-13!27;UBERON:0000467!1.19e-11!625;UBERON:0000948!2.04e-11!24;UBERON:0005498!2.04e-11!24;UBERON:0004140!2.04e-11!24;UBERON:0009881!2.04e-11!24;UBERON:0004141!2.04e-11!24;UBERON:0003084!2.04e-11!24;UBERON:0007005!2.04e-11!24;UBERON:0004139!2.04e-11!24;UBERON:0004291!2.04e-11!24;UBERON:0000480!2.34e-11!626;UBERON:0004872!3.27e-11!84;UBERON:0003103!3.51e-11!69;UBERON:0000483!7.08e-11!309;UBERON:0000119!9.54e-11!312;UBERON:0000481!2.47e-10!347;UBERON:0000922!2.75e-10!612;UBERON:0004111!5.06e-10!241;UBERON:0000025!7.92e-10!194;UBERON:0000475!8.74e-10!365;UBERON:0003914!1.57e-09!118;UBERON:0002050!1.61e-09!605;UBERON:0005423!1.61e-09!605;UBERON:0000923!3.42e-09!604;UBERON:0005291!3.42e-09!604;UBERON:0006598!3.42e-09!604;UBERON:0002532!3.42e-09!604;UBERON:0000477!4.20e-09!286;UBERON:0000064!8.69e-07!219 | |||
|ontology_enrichment_uberon_v019=UBERON:0007100;5.68e-13;25!UBERON:0000948;2.56e-11;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,2.60e-13,27;UBERON:0000948,1.18e-11,24;UBERON:0005498,1.18e-11,24;UBERON:0004140,1.18e-11,24;UBERON:0009881,1.18e-11,24;UBERON:0004141,1.18e-11,24;UBERON:0003084,1.18e-11,24;UBERON:0007005,1.18e-11,24;UBERON:0004139,1.18e-11,24;UBERON:0004291,1.18e-11,24;UBERON:0003103,1.44e-11,68;UBERON:0004872,1.04e-10,83;UBERON:0000483,2.12e-09,306;UBERON:0000119,2.78e-09,309;UBERON:0003914,3.52e-09,117;UBERON:0000025,4.58e-09,192;UBERON:0004111,9.21e-09,240;UBERON:0005423,4.98e-08,581;UBERON:0000922,5.34e-08,592;UBERON:0002050,3.40e-07,564 | |||
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| ||
|short_description=p2@PTGFRN | |short_description=p2@PTGFRN | ||
}} | }} |
Latest revision as of 09:49, 16 September 2015
Short description: | p2@PTGFRN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PTGFRN_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000393203, ENST00000544471, NM_020440, uc001egv.1_5end |
EntrezGene: | PTGFRN |
HGNC: | 9601 |
UniProt: | Q9P2B2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiocyte | 5.22e-08 | 16 |
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 2.60e-13 | 27 |
heart | 1.18e-11 | 24 |
primitive heart tube | 1.18e-11 | 24 |
primary heart field | 1.18e-11 | 24 |
anterior lateral plate mesoderm | 1.18e-11 | 24 |
heart tube | 1.18e-11 | 24 |
heart primordium | 1.18e-11 | 24 |
cardiac mesoderm | 1.18e-11 | 24 |
cardiogenic plate | 1.18e-11 | 24 |
heart rudiment | 1.18e-11 | 24 |
compound organ | 1.44e-11 | 68 |
splanchnic layer of lateral plate mesoderm | 1.04e-10 | 83 |
epithelium | 2.12e-09 | 306 |
cell layer | 2.78e-09 | 309 |
epithelial tube | 3.52e-09 | 117 |
tube | 4.58e-09 | 192 |
anatomical conduit | 9.21e-09 | 240 |
developing anatomical structure | 4.98e-08 | 581 |
embryo | 5.34e-08 | 592 |
embryonic structure | 3.40e-07 | 564 |