FFCP PHASE1:Hg19::chr1:117452669..117452748,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5738 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9601 | |||
|TSSclassifier=strong | |||
|UniProt=Q9P2B2 | |||
|association_with_transcript=0bp_to_ENST00000393203,ENST00000544471,NM_020440,uc001egv.1_5end | |||
|cluster_id=chr1:117452669..117452748,+ | |||
|description=CAGE_peak_2_at_PTGFRN_5end | |||
|id=chr1:117452669..117452748,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.50e-09!180;CL:0002494!7.44e-08!16;CL:0000220!1.65e-07!246;CL:0002321!1.69e-07!248 | |||
|ontology_enrichment_celltype_v019=CL:0002494;6.41e-08;16 | |||
|ontology_enrichment_celltype_v019_2=CL:0002494,5.22e-08,16 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!7.33e-16!659;UBERON:0007100!4.95e-13!27;UBERON:0000467!1.19e-11!625;UBERON:0000948!2.04e-11!24;UBERON:0005498!2.04e-11!24;UBERON:0004140!2.04e-11!24;UBERON:0009881!2.04e-11!24;UBERON:0004141!2.04e-11!24;UBERON:0003084!2.04e-11!24;UBERON:0007005!2.04e-11!24;UBERON:0004139!2.04e-11!24;UBERON:0004291!2.04e-11!24;UBERON:0000480!2.34e-11!626;UBERON:0004872!3.27e-11!84;UBERON:0003103!3.51e-11!69;UBERON:0000483!7.08e-11!309;UBERON:0000119!9.54e-11!312;UBERON:0000481!2.47e-10!347;UBERON:0000922!2.75e-10!612;UBERON:0004111!5.06e-10!241;UBERON:0000025!7.92e-10!194;UBERON:0000475!8.74e-10!365;UBERON:0003914!1.57e-09!118;UBERON:0002050!1.61e-09!605;UBERON:0005423!1.61e-09!605;UBERON:0000923!3.42e-09!604;UBERON:0005291!3.42e-09!604;UBERON:0006598!3.42e-09!604;UBERON:0002532!3.42e-09!604;UBERON:0000477!4.20e-09!286;UBERON:0000064!8.69e-07!219 | |||
|ontology_enrichment_uberon_v019=UBERON:0007100;5.68e-13;25!UBERON:0000948;2.56e-11;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,2.60e-13,27;UBERON:0000948,1.18e-11,24;UBERON:0005498,1.18e-11,24;UBERON:0004140,1.18e-11,24;UBERON:0009881,1.18e-11,24;UBERON:0004141,1.18e-11,24;UBERON:0003084,1.18e-11,24;UBERON:0007005,1.18e-11,24;UBERON:0004139,1.18e-11,24;UBERON:0004291,1.18e-11,24;UBERON:0003103,1.44e-11,68;UBERON:0004872,1.04e-10,83;UBERON:0000483,2.12e-09,306;UBERON:0000119,2.78e-09,309;UBERON:0003914,3.52e-09,117;UBERON:0000025,4.58e-09,192;UBERON:0004111,9.21e-09,240;UBERON:0005423,4.98e-08,581;UBERON:0000922,5.34e-08,592;UBERON:0002050,3.40e-07,564 | |||
|phase1_expression=3.81524596468169,3.42560838225573,4.79244973926302,6.00439790118782,10.7270662662549,7.85104671690332,2.53299878168311,3.15859936713415,9.66386824339403,3.68600904752263,2.09340350391728,11.5773927228991,7.3854753903967,11.1389717664042,20.5466372951308,13.4465029290355,7.8350288643117,10.2243412654232,14.1500511649247,5.0479633811483,4.08001382488506,5.95563970808367,10.304495536718,4.65373045247806,3.51519390865448,1.37544130346312,1.06730766284929,0.944529375764151,0.393364276848904,0,0.619264493264304,2.75826367343678,5.12050061923025,2.9580320813343,0,0,0,0,0.601633342410425,0.217010870715852,3.80656306207871,3.2389366601898,3.34848237924443,0.145398238779565,0.755751887377619,0.242584061187816,0.464858073811369,0,0,0.28769239232215,0.256160706529101,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0,0,0.521482918420201,0.217188844705117,0.605399502633369,0,0,0.211255286311942,0,0,0.112328631146495,0.300353785683013,0.16072558669708,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0.196709770113833,0.393010762749165,0.205601498999509,0.334372990781356,0,0.946895611469467,1.94826728407911,0.445641827540694,0,0.221533894583621,0.270803863765016,0.128091319725675,0.130059347559878,0.328875809207352,0.552700035571697,0,0.296573126324121,0,0,0.339928028092699,0,0,0.253019692019503,0,0,0,0,0,1.24930726552346,0,0,0,0.534880391567015,0,21.9426179682566,12.7433163343691,22.7595360081484,2.53007406669196,7.01873074890245,7.09747942908036,3.9764297352555,4.37971383272372,3.49778823507051,3.99112915432615,6.32410456990508,4.97720486891308,4.00724817121796,4.44941331341315,1.29818957461873,0.870648686496336,1.19662164466979,0,0,0,0.79504962946682,3.4409383804245,3.47140501607594,0.56530794192401,2.93649605346934,0.550236083880135,3.9709043641994,1.55050055501597,3.20189636418039,3.01248551488203,4.43112248820062,4.56163263431108,11.9590408198603,1.47065232138347,7.29127753093584,2.14319347881791,1.79623498100936,2.25222960966644,0,2.84779697870439,3.84723662253855,0,0,6.10531672999548,13.9152146474689,6.83804762988731,7.28250494472703,27.2494789711373,4.25602058638028,12.3349072031308,20.2823091886439,18.0067310344527,6.84664277879486,10.2380110772963,7.35578564010564,5.2975099675726,5.18558332031999,4.21778577300834,2.80944069147288,1.1409436430889,0.448346041655403,1.52664848236894,1.29498355494505,1.26405726032024,0.61246251376468,1.35117749042945,1.34323515528495,1.18800285728205,1.7308685049499,0,0.718618141816238,1.17835279767846,1.12606667884768,0.277064115484183,0,2.14541457059314,3.60571341375832,9.64173556860179,3.7671823494661,6.19316427573846,8.9011398487016,1.80054657650641,2.37020817248409,3.60696756063881,2.97786970130544,1.35021065793013,1.46155507741798,3.5340728394176,6.07529331039176,13.739914829599,7.81021103536552,4.13083602733325,2.54340888465731,5.9910864480622,6.81865301477087,4.58887352622406,2.6834215348511,2.65059536642971,3.95059405756363,4.35376431064556,1.51392510525377,2.91981887260664,1.56449532329816,1.92972281457866,1.38134921352481,0.464367928031979,0.721879481669586,0.828147600278907,1.18009283054671,2.6511213287183,1.7647035637183,2.39667388501647,0.949082476444386,1.48314438976181,0.784885860501384,2.30848294167834,1.4763109092493,5.60967095213783,9.4662022606222,5.88034845542168,1.26755034821831,2.94848165003288,1.18157981336281,0,0.737930631258681,6.51957679134397,8.23127140564692,1.1240175325762,1.40740561376283,7.31448716752384,2.6064664424826,0,1.44331342025273,7.07175470347969,8.6882433734508,6.78522304477047,6.01881166349594,9.32245345949531,2.37061319387782,4.29243081047436,2.95460407304877,0.468008530278475,1.63494278517601,4.68669169933885,15.6223379224939,6.37987937590739,6.08997954379368,6.68458058582112,5.36735750831296,0.492663237895943,0.088048434013226,0.829312462163088,0.576479813667846,0.50496973370552,3.61937997465364,1.14596527667483,1.17217447210047,8.55362230113526,3.18765227380303,2.40274446275134,5.14487578735041,1.23344192779897,3.92364061949952,1.54010400223995,8.14411809274,0,2.535908257668,1.32969058292435,0,2.05765899409714,0,1.5985330740966,4.86125178437702,1.62786481617433,0.823240336780769,0.325736184293735,7.81862287233601,0,6.93310567237048,9.58686804460323,7.39800134747222,1.2162378064119,0,2.10833939483032,5.03212196532324,5.7430967917057,9.98458335285029,3.04040744001916,4.31500277355805,5.72995082367666,0,0,0,0,3.55732473911449,6.50699269288109,6.18631050222156,3.01529277601828,0.637938751653163,0,0,0,18.2810322661518,7.50255781589516,10.30807090059,4.36738809214695,3.03329280955175,1.73472656537328,1.99140405487612,7.82459859292069,9.09630016223939,7.24311499047534,8.63493278096067,10.1403042697937,1.04260337361699,5.09083009403126,5.83343820478455,0,0,0,1.5156378572313,8.32177197552485,11.4908311465279,5.21026396419431,3.37616341233737,4.77122160536225,5.89440086576224,2.55853624533352,9.97294311090366,5.93672265779964,1.69630663182921,3.9063579568888,3.53146770859379,7.78881643775432,3.1376802184189,2.77976734060731,18.0455823272956,1.93370076765382,0.114814448164607,0,0.131124414959424,2.70719767744447,4.46688955205606,3.92174884588428,7.30696123266303,5.27758144464378,1.13733384070897,2.38131187387122,3.23873874153209,3.08454505380579,4.33514300070165,5.51858751240339,2.54876273045038,0.831076008928724,5.1491193586101,0,0,4.35965212697862,4.26419039409617,2.27764876265012,2.47298427954533,4.94475110019054,3.54790849658528,9.18824860793876,6.50060246036521,9.64103579064957,13.8239127157734,1.69453478826109,2.6095624703442,2.06754858726796,4.0819693049944,3.91545073568417,3.92042486114064,13.9780295965378,14.0492178056831,15.5673954565736,9.95379157457756,6.17062463218855,0.464845549297286,30.8516099894027,6.2733354314454,3.38836938193698,5.32306030317022,7.82939692867565,10.1928320507156,7.29936922384155,3.34942532423701,2.84741482246853,2.85945290885737,0.511795582622668,1.71175595213568,9.86430068570404,3.13979456079692,1.97859703341646,2.74537029736055,2.47406044925942,3.841467149893,4.75530963519025,5.89761838734574,0,4.38684281336312,0,1.36499911407986,0.282810863907425,3.39024349860728,7.16774946609961,2.65375590096488,2.63070531152258,2.31510213706675,3.9353685122798,1.62328301570163,0.6196469961995,1.40847801266121,3.87210650950939,3.53696547647236,2.1400263088875,1.06428319221179,39.2660201653655,13.1717957183961,1.51789269506286,2.0996083214699,3.27155183266741,4.02181365321472,5.44454924306613,3.10674542563371,8.17960208075337,8.42357378338128,4.87773168890343,5.74308500517399,0,0,0,0,0,0.648473311192717,0,0,6.08897205426597,1.92495971052672,3.18552280775341,0,0,0.0711418433484141,0,0,0.766021480529467,0,0.324621940274555,0,0,0.156679895773023,0,1.18504244461122,0.481764225311099,0.201799707191048,1.70338495076131,0,0,0,0.500547425135725,0,0,0,0.811367035427949,0,1.4098700508785,1.49712432326576,3.95572084034114,0.242721043499027,0.780103689942349,2.27308917445131,7.1623345421307,5.3453642549875,9.21482106297696,1.9882952955326,2.67271891179974,5.78805266119111,0,8.86726714137573,6.5751836122853,3.59169090190492,2.77126022639704,4.09074730008619,0.861593638227486,5.59871257791253,1.52776196950456,2.14825409610731,0,7.00368180022229,0,2.22273980289274,4.84666373047609,3.52518773015035,5.98841394003583,6.51069402713083,1.74919999992391,2.89999830173917,3.18621655199399,0,1.65471377237555,1.37897349296586,3.2076507472158,5.55599983786535,2.65722415744152,2.41192877250816,0,0.995213339381022,0.295547618953547,3.72955175161753,1.41620002574687,6.27406849253715,11.3116880000582,12.1917999756291,1.38338342632836,0.0897576444097721,3.04212641381623,9.8890359516895,5.31266041730801,14.9249737285218,0,0.156980256395025,0.498635045700469,2.48155226678899,1.76456280885966,1.34257269580674,0.948768663620925,0.317873157960757,3.58696709697646,1.14262965711403,0.989471500037586,4.9769387140681,8.95735737970654,10.703365304904,11.6095727537389,0.296521128680622,1.48276726735803,1.14864144456001,1.55022605855557,5.61804353109152,3.98249557733077,0,2.93496928398135,0.728341138602278,5.12959723704208,10.8891644443797,4.59109142445735,7.45601639616158,5.56196651833622,4.25121584728713,0,0,0,1.19472429772959,2.56148591426813,0,2.08271686002157,4.50765028106137,3.65648667637691,9.78469342155369,0.171986032471617,2.12863928835987,1.09633975629278,1.88865551222381,8.34105541800407,0.0882561266915003,9.26521037200183,11.6485635949738,2.58328995213887,5.31810686029381,1.56441106187842,6.6531820808773,9.81883775801022,2.39771531498556,1.00863292007874,0.229073192331831,1.20116498503375,0,2.98206085357038,4.24249262310232,2.98989253361951,2.196659772559,4.07992870545287,15.3143812647805,2.40168115483916,1.09524303113594,0,19.769210305318,0,20.3876152928746,11.9163420486076,20.8183177127276,8.78587602195561,12.8767814440971,16.0683449358148,13.1007771349116,8.28689732147528,3.49487848582361,0.236349546921671,0.329663433524666,0.26961417541674,3.6418168160457,1.01607998478941,0.795229689809303,2.45166131000836,1.76828463311521,0.962776056180637,2.49264202817511,1.5748172408605,0.77380195455795,4.25246896606173,0.335434687599266,1.18208560948797,5.03564046095982,0,1.97216073266129,11.8987422338056,10.7204298956005,8.60719561475061,0,2.17199840701485,1.72844298240254,1.30634944043764,4.7892076624995,2.79114570547752,9.20095317641277,3.9659232032044,0.732761168390412,0,2.84422503995411,2.90911723833918,0.855434189421647,7.75296524548339,1.17466153824464,5.97376359378731,2.07119527673598,0.496166021811951,0,0,7.66009509324218,0.544017803369474,0.7520696820681,1.22538230705385,0.655745261419609,3.61224421375539,3.54427271986794,2.68457782784319,4.63206443614049,1.14681839138014,2.10765197920019,3.35320575883471,6.91743174681154,5.87407917421901,2.72968411574966,1.7127920012698,2.35265819698172,2.34167452903441,2.46365748638403,3.28360566351123,3.97312626740282,6.10286447652875,4.35626912132705,4.27665432979378,11.567545880755,9.84012294106771,7.10785341687223,5.28486481981454,11.0891362492225,4.46030948058367,9.4458653554357,7.29735897318419,4.56176828624941,7.70940972218185,2.60872530905867,11.4195782837886,12.947377213739,6.10306099806992,7.81949234571006,6.33722286550682,8.81664143769138,11.5447807722599,0.400027764663154,10.3018711554838,11.1127331292753,1.26184898228651,0.57785949122191,1.28664954824955,4.4369029634086,1.13352962756136,8.33480907565802,0,1.61179956973339,3.39681591877069,3.94711289241673,4.41722864864703,2.50788249752189,0.168942440653073,2.56241518587947,0,0.911579868532147,4.97730370146231,0.584580926518165,0.531459361253452,0.817826971279221,3.93131818615695,12.5344183464397,1.69049698686902,1.59989916683944,0.960225567247268,0,0,6.81192015931811,1.53867458491389,3.11038630016486,3.4531480251986,9.70423302570136,8.6496268020743,5.24206263321667,4.58277830875868,6.80239744325385,3.96594445628807,5.58644917973244,5.40607396110812,0,3.20228299314188,0.705351887381368,0,4.43181653165571,4.25089728976755,3.67157875831448,5.12790910601888,4.03314713954749,4.21859240031729,4.35984243205998,1.42769420259154,10.5018058796097,0.943757786781923,6.23657234973709,2.31051332300676,4.57658514560601,2.0710797781803,8.95122999523236,12.6353351626752,12.3040091909147,5.47059807863165,1.30953347240711,3.27543835020193,0.887136517302272,4.72763092328763,3.12431239445539,4.75379631952723,5.51717548686989,4.92277328116398,4.38606213485746,6.94695649745012,1.05522746615772,4.08839768446705,3.74991285114801,1.3451348888753,0.606965604236632,2.04895972216168,6.91878487268583,0.230467975111559,1.37190407549935,2.51488012014277,4.47254860227374,0.709163045303809,0.556157009460346,7.8493092850514,1.25692471932802,6.16598759290336,7.30526976407596,3.88669664193519,1.43325506366115,7.29060750601895,0.94808167039636,0,6.08503953059028,0,3.9371071190977,3.24365106478505,1.38251932362818,10.3254566116867,0,0.170426809518315,3.38709640152743,3.2074961596167,0.62041277132864,0,2.01339777236026,6.47791541860604,0.121917924982269,1.29485767437579,1.43727929598746,15.0775876073966,15.0570407848333,1.40363678077263,4.97376937903421,2.02164154321867,4.06605895340256,3.73797756934459,4.07599677630019,5.24784275134024,5.02686989159102,0,10.0510811919101,6.83461986594715,1.37415926980462,3.26751040359795,19.019507741253,10.7054082253325,0.469919589899268,1.48253142339228,0,1.60698544745092,3.52894871715692,0.641930933513346,4.3820183294791,4.58729283404541,1.57673541466596,4.1020606170228,6.73115752890055,6.10890966476528,7.40637576721561,21.2037160355048,34.6631721473564,6.48939843185684,2.27099564703142,1.96678029534652,3.80095503034311,3.67159787071134,3.47382626845229,6.24885316836945,2.75778293221613,6.44118934855035,5.09131847296739,0.829169439458779,1.55149493792843,5.11761556562354,6.90386851244847,0.710478008196067,1.11734485732544,9.08268086902969,1.65482611523229,2.02117188958219,3.48346796635138,7.1868993227909,2.22261774948139,7.67427597701637,11.9757728356565,2.03508171527436,0,3.8614456457388,1.16772762738563,21.1176848163109,20.2920797343558,16.6827433109453,7.32332451604064,3.62292828463847,0 | |||
|short_description=p2@PTGFRN | |||
}} |
Latest revision as of 09:49, 16 September 2015
Short description: | p2@PTGFRN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PTGFRN_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000393203, ENST00000544471, NM_020440, uc001egv.1_5end |
EntrezGene: | PTGFRN |
HGNC: | 9601 |
UniProt: | Q9P2B2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiocyte | 5.22e-08 | 16 |
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 2.60e-13 | 27 |
heart | 1.18e-11 | 24 |
primitive heart tube | 1.18e-11 | 24 |
primary heart field | 1.18e-11 | 24 |
anterior lateral plate mesoderm | 1.18e-11 | 24 |
heart tube | 1.18e-11 | 24 |
heart primordium | 1.18e-11 | 24 |
cardiac mesoderm | 1.18e-11 | 24 |
cardiogenic plate | 1.18e-11 | 24 |
heart rudiment | 1.18e-11 | 24 |
compound organ | 1.44e-11 | 68 |
splanchnic layer of lateral plate mesoderm | 1.04e-10 | 83 |
epithelium | 2.12e-09 | 306 |
cell layer | 2.78e-09 | 309 |
epithelial tube | 3.52e-09 | 117 |
tube | 4.58e-09 | 192 |
anatomical conduit | 9.21e-09 | 240 |
developing anatomical structure | 4.98e-08 | 581 |
embryo | 5.34e-08 | 592 |
embryonic structure | 3.40e-07 | 564 |