FFCP PHASE1:Hg19::chr5:151047146..151047178,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6678 | |EntrezGene=6678 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11219 | |HGNC=11219 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-1bp_to_ENST00000537849_5end | |association_with_transcript=-1bp_to_ENST00000537849_5end | ||
|cluster_id=chr5:151047146..151047178,- | |||
|coexpression_cluster_id=C470 | |||
|description=CAGE_peak_4_at_SPARC_5end | |description=CAGE_peak_4_at_SPARC_5end | ||
|id=chr5:151047146..151047178,- | |id=chr5:151047146..151047178,- | ||
|ontology_enrichment_celltype=CL:0000055!1.11e-27!180;CL:0000222!3.58e-16!119;CL:0000057!2.48e-15!75;CL:0000183!2.51e-11!59;CL:0000680!5.89e-11!57;CL:0000056!5.89e-11!57;CL:0000355!5.89e-11!57;CL:0000187!1.58e-10!54;CL:0000136!1.92e-10!15;CL:0000192!1.91e-09!42;CL:0000514!1.91e-09!42;CL:0000393!4.70e-09!60;CL:0000211!4.70e-09!60;CL:0000220!2.42e-07!246;CL:0002321!3.28e-07!248;CL:0000213!3.57e-07!57;CL:0000215!3.57e-07!57;CL:0000359!6.35e-07!32 | |ontology_enrichment_celltype=CL:0000055!1.11e-27!180;CL:0000222!3.58e-16!119;CL:0000057!2.48e-15!75;CL:0000183!2.51e-11!59;CL:0000680!5.89e-11!57;CL:0000056!5.89e-11!57;CL:0000355!5.89e-11!57;CL:0000187!1.58e-10!54;CL:0000136!1.92e-10!15;CL:0000192!1.91e-09!42;CL:0000514!1.91e-09!42;CL:0000393!4.70e-09!60;CL:0000211!4.70e-09!60;CL:0000220!2.42e-07!246;CL:0002321!3.28e-07!248;CL:0000213!3.57e-07!57;CL:0000215!3.57e-07!57;CL:0000359!6.35e-07!32 | ||
|ontology_enrichment_celltype_v019=CL:0000136;3.57e-10;13!CL:0000134;7.15e-09;55!CL:0000048;2.60e-08;58!CL:0000723;3.85e-08;61!CL:0000349;8.03e-08;19!CL:0002334;3.32e-07;12!CL:0000192;3.34e-07;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,1.85e-17,121;CL:0000057,1.06e-14,76;CL:0000680,1.57e-11,58;CL:0000056,1.57e-11,58;CL:0000355,1.57e-11,58;CL:0000136,2.13e-11,15;CL:0000187,4.71e-11,55;CL:0000192,6.65e-10,43;CL:0000514,6.65e-10,43;CL:0000393,8.07e-09,61;CL:0000211,8.07e-09,61;CL:0000213,4.01e-08,58;CL:0000215,4.01e-08,58;CL:0000349,7.71e-08,19;CL:0002334,2.89e-07,12;CL:0000359,6.02e-07,32 | |||
|ontology_enrichment_development_v019=CL:0000514;3.34e-07;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004872!5.06e-17!84;UBERON:0000914!3.71e-13!83;UBERON:0002329!3.71e-13!83;UBERON:0003077!3.71e-13!83;UBERON:0003059!3.71e-13!83;UBERON:0007282!3.71e-13!83;UBERON:0009618!3.71e-13!83;UBERON:0007285!3.71e-13!83;UBERON:0002049!4.69e-13!79;UBERON:0007798!4.69e-13!79;UBERON:0004535!1.31e-12!110;UBERON:0001009!2.19e-12!113;UBERON:0004290!3.17e-12!70;UBERON:0001134!6.96e-12!61;UBERON:0002036!6.96e-12!61;UBERON:0003082!6.96e-12!61;UBERON:0002385!9.92e-12!63;UBERON:0001015!9.92e-12!63;UBERON:0000383!9.92e-12!63;UBERON:0000055!1.23e-11!69;UBERON:0001981!3.16e-11!60;UBERON:0007500!3.16e-11!60;UBERON:0004537!3.16e-11!60;UBERON:0006965!3.16e-11!60;UBERON:0005256!4.82e-11!143;UBERON:0000486!4.42e-10!82;UBERON:0000475!4.54e-10!365;UBERON:0000490!1.93e-09!138;UBERON:0001637!2.37e-09!42;UBERON:0003509!2.37e-09!42;UBERON:0004572!2.37e-09!42;UBERON:0003914!3.67e-09!118;UBERON:0000468!1.20e-08!659;UBERON:0002100!2.30e-08!216;UBERON:0001013!3.84e-08!14;UBERON:0003102!1.05e-07!95;UBERON:0004573!2.21e-07!33;UBERON:0004571!2.21e-07!33;UBERON:0004923!3.51e-07!57;UBERON:0000478!4.38e-07!24;UBERON:0005631!5.50e-07!14;UBERON:0000158!5.50e-07!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0001013;8.39e-09;14!UBERON:0001637;2.32e-07;42!UBERON:0003509;2.32e-07;42!UBERON:0004572;2.32e-07;42!UBERON:0002384;3.27e-07;198 | |||
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|phase1_expression=112.458916768475,51.5982262577269,167.59478647011,30.0219895059391,124.702145345213,33.148863915814,151.979926900986,31.5859936713415,20.8948502559871,0.491467873003018,0,1.31064823278103,5.80287352102598,2.10402800032079,2.31978163009541,1.34465029290355,1.80808358407193,0,0.487932798790507,0.984968464614303,1.83600622119828,3.76145665773705,1.14494394852423,0.410623275218653,0.627713197974014,0,0.0821005894499457,0,0,0,0.309632246632152,0,0,0,0,0,0,1.10799081706375,0,0,1.34349284543955,2.26725566213286,1.54545340580512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.31420598941885,6.03630773733273,3.58015173161885,9.75885711438329,12.0321098552613,17.236735756338,38.1737254584528,31.1446316993687,1.22895262313288,2.21729397462564,1.66886092816939,2.75056058545197,0.364295288292542,0.370784442784429,0,0,0.132957960518865,0,0,0,1.59009925893364,1.72046919021225,4.51282652089873,2.26123176769604,5.03399323451887,4.67700671298115,2.92592953151535,4.13466814670926,4.98072767761394,5.69025041699939,5.23678112241891,2.28081631715554,8.54217201418593,4.04429388380456,12.1521292182264,3.92918804449951,1.79623498100936,1.12611480483322,0,4.74632829784064,2.01521918323448,0,0,0.436094052142534,26.8364853915472,29.1250176828533,5.56118559415519,46.7543691820566,13.8320669057359,5.04609840128076,4.2699598291882,36.2601296173225,10.5811752035921,5.25371621071783,2.12500474047496,9.08144565869588,5.18558332031999,0.234321431833797,4.37024107562449,2.85235910772225,2.98897361103602,0.704606991862589,0.161872944368132,0.421352420106746,3.26646674007829,0.737005903870608,3.40975077880026,33.2640800038975,35.1119039575551,2.73048408581408,5.03032699271367,1.0100166837244,0.750711119231785,0.554128230968366,6.14568669233173,12.8724874235588,22.3854707770829,3.40296549480063,2.33206526395521,14.9490172172997,10.5965950579781,3.90118424909723,4.63736381572975,2.83404594050192,17.4949844951694,3.37552664482532,9.06164147999147,1.51460264546469,9.02089006694534,7.59736467048416,6.74518225781567,5.84362169720314,2.37384829234683,1.35282597214308,1.63647672354501,1.14721838155602,0.365921118388786,0.132529768321485,0.348581828608555,0.518305275076852,1.26160425437814,0.36497735907583,1.56449532329816,7.07565032012174,4.14404764057442,4.17931135228781,2.16563844500876,0,0,0,0,0,0,0,0,0,5.90524363699719,8.41450642820675,7.4083322039652,16.1709582524096,0,0,4.13552934676983,0,0.122988438543114,1.20097467208968,0.98775256867763,0,0.603173834469785,0.555530670951178,0.325808305310325,1.03993478527958,1.44331342025273,0.463721619900307,5.87043471179108,2.59859605969933,0.462985512576611,1.52203321787679,0,0,0.246217006087397,1.40402559083543,1.0404181360211,0.93733833986777,1.00789276919316,0.283550194484773,0,0,0,0,0.088048434013226,2.07328115540772,1.00883967391873,1.51490920111656,0.190493682876507,7.25778008560728,3.51652341630141,5.13217338068116,0.925447434329912,0.901029173531752,2.28661146104463,1.56983518083505,0,1.6134422880609,21.2005613842756,21.4593867511129,5.917119267892,23.4025542594686,8.32059495290929,0.771622122786426,1.41849132023278,1.3321108950805,6.57698770827479,25.5032154533978,0.823240336780769,3.58309802723109,6.39705507736582,0.791951872933429,14.4690900988601,12.2014684204041,14.09619175667,0,0,0,20.6077375722761,12.6348129417525,0,5.21212704003285,4.10952645100767,1.43248770591916,0,0,0,0,6.86055485400651,1.30139853857622,0,0.837581326671744,0.637938751653163,0.749007023947182,0,2.48649308061621,2.82190430954022,4.00136416847742,0.542530047399471,12.2702808303176,11.9547422494098,6.30809660135739,5.73992933464295,25.5804184768561,63.6741011356758,10.3473071292505,1.99267679560631,5.34670588770939,6.86380554297854,11.1606659753762,12.01001983338,0.413536052245775,0,0,7.57818928615649,31.6227335069944,15.119514666484,119.091747753013,6.75232682467475,39.5730733150634,160.558354017393,41.448287174403,64.8241302208738,10.3892646511494,1.69630663182921,32.138672281676,8.9518600055052,3.11552657510173,3.7187321107187,0.362578348774867,3.80962293576241,0.0920809889358963,9.52959919766236,5.46273504020151,16.6528006998469,0.451199612907412,0.308061348417659,0,0,0.105551628892876,1.13733384070897,2.55140557914773,2.15915916102139,21.5918153766405,1.62567862526312,1.00337954770971,0,0.831076008928724,0.223874754722178,0,0,0.512900250232778,1.96808787419823,0.650756789328606,6.4915837338065,0.54941678891006,0.660075999364704,2.87132768998086,1.30012049207304,38.5641431625983,5.89691381581944,1.23238893691716,2.76306614507033,0.137836572484531,4.83391101907231,3.48040065394148,1.61930592090592,22.5251050186246,0.661139661443912,0,0.127612712494584,0.10115778085555,2.32422774648643,46.2774149841041,5.5762981612848,4.62050370264133,4.25844824253617,0.869932992075073,12.4167226799626,7.72874388406753,3.72158369359667,6.32758849437452,12.3909626050486,4.094364660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| ||
|short_description=p4@SPARC | |short_description=p4@SPARC | ||
}} | }} |
Latest revision as of 10:07, 16 September 2015
Short description: | p4@SPARC |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SPARC_5end |
Coexpression cluster: | C470_Adipocyte_Preadipocyte_Smooth_Fibroblast_aorta_normal_Mesenchymal |
Association with transcript: | -1bp_to_ENST00000537849_5end |
EntrezGene: | SPARC |
HGNC: | 11219 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 1.85e-17 | 121 |
fibroblast | 1.06e-14 | 76 |
muscle precursor cell | 1.57e-11 | 58 |
myoblast | 1.57e-11 | 58 |
multi-potent skeletal muscle stem cell | 1.57e-11 | 58 |
fat cell | 2.13e-11 | 15 |
muscle cell | 4.71e-11 | 55 |
smooth muscle cell | 6.65e-10 | 43 |
smooth muscle myoblast | 6.65e-10 | 43 |
electrically responsive cell | 8.07e-09 | 61 |
electrically active cell | 8.07e-09 | 61 |
lining cell | 4.01e-08 | 58 |
barrier cell | 4.01e-08 | 58 |
extraembryonic cell | 7.71e-08 | 19 |
preadipocyte | 2.89e-07 | 12 |
vascular associated smooth muscle cell | 6.02e-07 | 32 |