FFCP PHASE1:Hg19::chr12:112450983..112450996,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=89894 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25084 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_uc001ttj.1_5end | |||
|cluster_id=chr12:112450983..112450996,- | |||
|description=CAGE_peak_4_at_TMEM116_5end | |||
|id=chr12:112450983..112450996,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000955!1.08e-19!69;UBERON:0006238!1.08e-19!69;UBERON:0001049!1.17e-19!57;UBERON:0005068!1.17e-19!57;UBERON:0006241!1.17e-19!57;UBERON:0007135!1.17e-19!57;UBERON:0001017!6.33e-18!82;UBERON:0000073!1.84e-17!94;UBERON:0001016!1.84e-17!94;UBERON:0005743!4.66e-17!86;UBERON:0007023!5.95e-17!115;UBERON:0002780!5.51e-16!41;UBERON:0001890!5.51e-16!41;UBERON:0006240!5.51e-16!41;UBERON:0002616!1.40e-15!59;UBERON:0003080!2.90e-15!42;UBERON:0001893!2.50e-14!34;UBERON:0002020!5.18e-14!34;UBERON:0003528!5.18e-14!34;UBERON:0002791!1.10e-13!33;UBERON:0000153!1.29e-13!129;UBERON:0007811!1.29e-13!129;UBERON:0001869!5.12e-13!32;UBERON:0003075!7.10e-13!86;UBERON:0007284!7.10e-13!86;UBERON:0000033!1.37e-12!123;UBERON:0002346!1.69e-12!90;UBERON:0000956!2.21e-11!25;UBERON:0000203!2.21e-11!25;UBERON:0002619!1.28e-10!22;UBERON:0003056!7.07e-10!61;UBERON:0001950!8.69e-10!20;UBERON:0004121!2.17e-09!169;UBERON:0000924!2.70e-09!173;UBERON:0006601!2.70e-09!173 | |||
|ontology_enrichment_uberon_v019=UBERON:0002021;1.31e-17;5!UBERON:0001874;8.20e-11;1!UBERON:0002146;8.20e-11;1!UBERON:0005623;8.20e-11;1!UBERON:0002791;2.07e-09;32!UBERON:0001869;7.70e-09;32!UBERON:0003528;1.60e-08;34!UBERON:0002020;1.60e-08;34!UBERON:0001893;3.44e-07;34!UBERON:0001017;6.52e-07;75!UBERON:0002619;8.80e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,9.36e-18,5;UBERON:0001874,6.77e-11,1;UBERON:0002146,9.97e-11,1;UBERON:0005623,9.97e-11,1;UBERON:0002791,5.37e-10,32;UBERON:0001869,5.37e-10,32;UBERON:0000955,7.40e-10,68;UBERON:0006238,7.40e-10,68;UBERON:0003528,2.12e-09,34;UBERON:0002020,2.12e-09,34;UBERON:0001893,2.12e-09,34;UBERON:0001016,6.55e-09,89;UBERON:0007023,1.74e-08,114;UBERON:0001017,4.06e-08,81;UBERON:0000073,6.25e-08,53;UBERON:0002616,6.25e-08,53;UBERON:0002780,9.30e-08,41;UBERON:0001890,9.30e-08,41;UBERON:0003080,9.30e-08,41;UBERON:0006240,9.30e-08,41;UBERON:0001049,1.79e-07,56;UBERON:0005068,1.79e-07,56;UBERON:0006241,1.79e-07,56;UBERON:0007135,1.79e-07,56;UBERON:0002619,7.31e-07,22 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0.261185628199839,0,0,0,0,0.123766352960047,0,0,0,0,0,0.246242116153576,0,0,0.286235987131057,0.136874425072884,0.251085279189606,0.229240217243854,0.0821005894499457,0.0787107813136792,0.393364276848904,0,0,0,0,0,0.154934401160603,0,0,0.553995408531877,0,0,0,0,0.257575567634187,0,0,0,0,0,0.309706370895104,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221533894583621,0,0,0.130059347559878,0,0,0,0,0,1.04535523804977,0,0,0,0.253019692019503,0,0,0,0,0.127986611154418,0,0,0.821127996921047,0,0,0.144824403882799,0,0,0.255725123687061,0,0.50133791063589,0.434539556882471,0,0.973269740605272,0.189069634328136,0,0.087834785693126,1.63723844372141,0,0,0,0,0,0,0,0.371457501329565,0,0,0,0.56530794192401,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286836620748814,0,0,0,0,0,0.134710672069688,0,0.302714855289863,0,0,0,0,0,0,0.647491777472526,0,0,0.122834317311768,0,0,0,0,0,0.168336113954066,0.125118519871964,0.554128230968366,0,0,0.150238058906597,0.226864366320042,0,0,0.211931901159562,0.300091096084402,0,0,0,0.168776332241266,0,0,0,0,0,0.10075209822764,0.169560592310488,0,0,0,0.243947412259191,0,0.813357600086629,0.518305275076852,0.252320850875628,0.36497735907583,0,0,0,0,0,0.236613600079688,0,0,0.772057809126758,0.217879444092406,0,0,0,0.769494313892781,0,0,0,0,0,0,0,1.32438929824395,0,0,0.109750285408626,0,0.100528972411631,0,0,0,0,0.115930404975077,0.117408694235822,0,0,0.190254152234598,0,0.858486162094873,0.246217006087397,0.234004265139238,0,0,0,0.141775097242386,0.358234090811393,0,0,0,0.088048434013226,0.207328115540772,0,0,0.126995788584338,0.381988425558278,0,0,0.102827492703324,0,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0.336255431980582,0,0.215627574859517,0,0,0,0,0,0,0,0,0,0.49076596687656,0,0,0,0,0.157702415033935,0.234282829985426,1.20378439891088,0,0,0,0.184369168541703,0.260650843404249,0,0,0,0,0,0.303127571446259,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116210378459959,0,0,0.184161977871793,0,0.182091168006717,0,0,0.0770153371044148,0,0,0,0,0,0,0,0.270946437543853,0,0.254876273045038,0,0.223874754722178,0.219259876645935,0.261435451024901,0,0,0,0.206082023295445,0.0915694648183434,0,0,0,0,0,0,0.15350367472613,0,0,0,0,0.356128142586949,0,0,0.255225424989168,0.10115778085555,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0.274537029736055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0.329294892959902,0,0,0,0,0,0.188287601553558,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0.371606350251437,0,0.213425530045242,0,0,0,0.211673582723883,0,0,0.228234679033192,0,0,0,0,0.201799707191048,0,0,0,0.671028323677248,0.333698283423817,0,0.278406173895242,0,0,0,0,0,0,0,0,0,0,0,0.307160702099232,0.994147647766298,0.562677665642051,0.111308705022906,0.16480387422676,0,0.597743964753209,0.552567831062295,0,0,0.369254416383208,0.311039587661807,0,0.537063524026827,1.02314474045374,0.0986434056369336,2.3948309234694,0,1.93866549219044,0.834912883456661,5.98841394003583,0,0.174919999992391,0,0.1137934482855,0,0,1.03423011972439,0.583209226766509,0.694499979733169,0,0,0,0.442317039724898,0.591095237907095,0,0,0,0.0769502585037971,0.227884111694002,0,0.0897576444097721,0.108647371922008,0.638002319463839,0,0,0,0,0,0.225595660617181,0,0,0,0,0,0.163232808159148,0.282706142867882,0.432777279484182,0,0,0.611030144933625,0.296521128680622,0.247127877893006,0.104421949505455,0.741412462787447,0,0.702793337176017,0.182454789215666,0,0.485560759068186,0.394584402849391,0,0.30607276163049,0,0.150323419414493,0.207376382794494,0,0.330991955875499,0,0,0,0.138674673013139,0,0.0979923974143777,0,0.34945333648406,0.51595809741485,0.19351266257817,0.146178634172371,0.164230914106418,0.193978032976839,0,0.677942222341597,0,0.397429223405979,0.316553979779393,0,0.160317640503067,0,0,0,0.114536596165916,0.171594997861965,0,0,0.235694034616795,0.67952103036807,0.209205692624666,0.305994652908965,0.288950589901519,1.20084057741958,0.273810757783986,0,0,0.525774708558629,0,1.14580212005842,0,0.599037001496973,0,0.223171457441873,0.201550417460179,0,0,0.157566364614447,0,0.26961417541674,0.0984274815147488,0,1.59045937961861,0.136203406111576,0.160753148465019,0.412618309791701,0,0,0,0.303747783290123,0,0,0.209818352539992,0,0,0.767660789277781,0,0.662091970365432,0,0,0,0,0,0,0.340776043570843,0,0.293104467356165,0,0.387848869084652,0.39669780522807,0,0,0,0.157204305099666,0,0,0,0.243585196761792,0,0,0,0.919036730290385,0.327872630709804,0.471162288750703,0.886068179966986,0.732157589411779,0.500763722825999,1.14681839138014,0.110929051536852,0.496771223531068,0.276697269872462,0.124980407962107,0,0,0,0,0,0,0.233713309847224,0,0.189403005275089,0,0,0.457680136793847,0.151230923763239,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0.181848659202559,0,0,0,0.800055529326307,0.686791410365586,0.673498977531838,0,0.192619830407303,0.2144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|short_description=p4@TMEM116 | |||
}} |
Latest revision as of 10:35, 16 September 2015
Short description: | p4@TMEM116 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_TMEM116_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_uc001ttj.1_5end |
EntrezGene: | TMEM116 |
HGNC: | 25084 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
occipital lobe | 9.36e-18 | 5 |
putamen | 6.77e-11 | 1 |
pulmonary valve | 9.97e-11 | 1 |
semi-lunar valve | 9.97e-11 | 1 |
regional part of telencephalon | 5.37e-10 | 32 |
cerebral hemisphere | 5.37e-10 | 32 |
brain | 7.40e-10 | 68 |
future brain | 7.40e-10 | 68 |
brain grey matter | 2.12e-09 | 34 |
gray matter | 2.12e-09 | 34 |
telencephalon | 2.12e-09 | 34 |
nervous system | 6.55e-09 | 89 |
adult organism | 1.74e-08 | 114 |
central nervous system | 4.06e-08 | 81 |
regional part of nervous system | 6.25e-08 | 53 |
regional part of brain | 6.25e-08 | 53 |
regional part of forebrain | 9.30e-08 | 41 |
forebrain | 9.30e-08 | 41 |
anterior neural tube | 9.30e-08 | 41 |
future forebrain | 9.30e-08 | 41 |
neural tube | 1.79e-07 | 56 |
neural rod | 1.79e-07 | 56 |
future spinal cord | 1.79e-07 | 56 |
neural keel | 1.79e-07 | 56 |
regional part of cerebral cortex | 7.31e-07 | 22 |