FFCP PHASE1:Hg19::chr10:114206722..114206787,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr10:114206722..114206787,+ to FFCP PHASE1:Hg19::chr10:114206722..114206787,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=143187 | |EntrezGene=143187 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17792 | |HGNC=17792 | ||
|TSSclassifier=strong | |||
|UniProt=Q5W0D7,Q96AJ9 | |UniProt=Q5W0D7,Q96AJ9 | ||
|association_with_transcript=0bp_to_ENST00000472892,ENST00000483122,NM_145206,uc001kzx.2,uc001kzy.2,uc001kzz.2_5end | |||
|cluster_id=chr10:114206722..114206787,+ | |||
|description=CAGE_peak_2_at_VTI1A_5end | |||
|id=chr10:114206722..114206787,+ | |||
|ontology_enrichment_celltype=CL:0000860!1.26e-09!45;CL:0002057!5.74e-09!42;CL:0002009!3.51e-07!65;CL:0002194!4.26e-07!63;CL:0000576!4.26e-07!63;CL:0000040!4.26e-07!63;CL:0000559!4.26e-07!63 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.54e-09;33!CL:0002057;1.54e-09;33!CL:0000473;2.61e-07;39!CL:0000234;2.61e-07;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.10e-08,42;CL:0002057,2.10e-08,42;CL:0000473,7.56e-08,48;CL:0000234,7.56e-08,48;CL:0002139,7.38e-07,24 | |||
|ontology_enrichment_development_v019=CL:0002057;5.36e-07;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002780!2.76e-08!41;UBERON:0001890!2.76e-08!41;UBERON:0006240!2.76e-08!41;UBERON:0001049!3.55e-08!57;UBERON:0005068!3.55e-08!57;UBERON:0006241!3.55e-08!57;UBERON:0007135!3.55e-08!57;UBERON:0003080!5.25e-08!42;UBERON:0001893!3.14e-07!34;UBERON:0001869!6.03e-07!32;UBERON:0005743!7.23e-07!86;UBERON:0002791!8.98e-07!33;UBERON:0001017!9.87e-07!82 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002780,3.15e-09,41;UBERON:0001890,3.15e-09,41;UBERON:0003080,3.15e-09,41;UBERON:0006240,3.15e-09,41;UBERON:0001049,3.95e-09,56;UBERON:0005068,3.95e-09,56;UBERON:0006241,3.95e-09,56;UBERON:0007135,3.95e-09,56;UBERON:0000073,4.27e-09,53;UBERON:0002616,4.27e-09,53;UBERON:0001893,3.02e-08,34;UBERON:0001869,6.56e-08,32;UBERON:0003528,1.80e-07,34;UBERON:0002020,1.80e-07,34;UBERON:0001017,2.21e-07,81;UBERON:0002791,2.30e-07,32;UBERON:0000955,3.87e-07,68;UBERON:0006238,3.87e-07,68;UBERON:0001016,4.88e-07,89;UBERON:0002619,6.08e-07,22;UBERON:0000956,7.44e-07,25;UBERON:0000203,7.44e-07,25 | |||
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| ||
|short_description=p2@VTI1A | |||
}} | }} |
Latest revision as of 10:50, 16 September 2015
Short description: | p2@VTI1A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_VTI1A_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000472892, ENST00000483122, NM_145206, uc001kzx.2, uc001kzy.2, uc001kzz.2_5end |
EntrezGene: | VTI1A |
HGNC: | 17792 |
UniProt: | Q5W0D7Q96AJ9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.10e-08 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.10e-08 | 42 |
defensive cell | 7.56e-08 | 48 |
phagocyte | 7.56e-08 | 48 |
endothelial cell of vascular tree | 7.38e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
regional part of forebrain | 3.15e-09 | 41 |
forebrain | 3.15e-09 | 41 |
anterior neural tube | 3.15e-09 | 41 |
future forebrain | 3.15e-09 | 41 |
neural tube | 3.95e-09 | 56 |
neural rod | 3.95e-09 | 56 |
future spinal cord | 3.95e-09 | 56 |
neural keel | 3.95e-09 | 56 |
regional part of nervous system | 4.27e-09 | 53 |
regional part of brain | 4.27e-09 | 53 |
telencephalon | 3.02e-08 | 34 |
cerebral hemisphere | 6.56e-08 | 32 |
brain grey matter | 1.80e-07 | 34 |
gray matter | 1.80e-07 | 34 |
central nervous system | 2.21e-07 | 81 |
regional part of telencephalon | 2.30e-07 | 32 |
brain | 3.87e-07 | 68 |
future brain | 3.87e-07 | 68 |
nervous system | 4.88e-07 | 89 |
regional part of cerebral cortex | 6.08e-07 | 22 |
cerebral cortex | 7.44e-07 | 25 |
pallium | 7.44e-07 | 25 |