FFCP PHASE1:Hg19::chr12:113682327..113682334,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=53373 | |EntrezGene=53373 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18182 | |HGNC=18182 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=19bp_to_ENST00000428632_5end | |association_with_transcript=19bp_to_ENST00000428632_5end | ||
|cluster_id=chr12:113682327..113682334,+ | |||
|coexpression_cluster_id=C11 | |||
|description=CAGE_peak_19_at_TPCN1_5end | |description=CAGE_peak_19_at_TPCN1_5end | ||
|id=chr12:113682327..113682334,+ | |id=chr12:113682327..113682334,+ | ||
|ontology_enrichment_celltype=CL:0002274!5.15e-07!5;CL:0000457!5.15e-07!5;CL:0002191!5.15e-07!5;CL:0000097!5.15e-07!5;CL:0000831!5.15e-07!5;CL:0002028!5.15e-07!5 | |ontology_enrichment_celltype=CL:0002274!5.15e-07!5;CL:0000457!5.15e-07!5;CL:0002191!5.15e-07!5;CL:0000097!5.15e-07!5;CL:0000831!5.15e-07!5;CL:0002028!5.15e-07!5 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;8.98e-131;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p19@TPCN1 | |short_description=p19@TPCN1 | ||
}} | }} |
Latest revision as of 12:31, 16 September 2015
Short description: | p19@TPCN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_19_at_TPCN1_5end |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | 19bp_to_ENST00000428632_5end |
EntrezGene: | TPCN1 |
HGNC: | 18182 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cerebellum | 2.83e-66 | 6 |
rhombic lip | 2.83e-66 | 6 |
regional part of metencephalon | 9.75e-45 | 9 |
metencephalon | 9.75e-45 | 9 |
future metencephalon | 9.75e-45 | 9 |
segmental subdivision of hindbrain | 5.98e-34 | 12 |
hindbrain | 5.98e-34 | 12 |
presumptive hindbrain | 5.98e-34 | 12 |
segmental subdivision of nervous system | 1.86e-31 | 13 |
posterior neural tube | 1.82e-27 | 15 |
chordal neural plate | 1.82e-27 | 15 |
regional part of nervous system | 1.34e-08 | 53 |
regional part of brain | 1.34e-08 | 53 |
neural tube | 3.28e-08 | 56 |
neural rod | 3.28e-08 | 56 |
future spinal cord | 3.28e-08 | 56 |
neural keel | 3.28e-08 | 56 |
brain | 6.59e-07 | 68 |
future brain | 6.59e-07 | 68 |