FFCP PHASE1:Hg19::chrX:80377118..80377149,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chrX:80377118..80377149,-
|short_description=p1@HMGN5
|description=CAGE_peak_1_at_HMGN5_5end
|association_with_transcript=0bp_to_ENST00000373250_5end
|EntrezGe...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=79366 | |EntrezGene=79366 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8013 | |HGNC=8013 | ||
|TSSclassifier=strong | |||
|UniProt=Q5JSK6 | |UniProt=Q5JSK6 | ||
|association_with_transcript=0bp_to_ENST00000373250_5end | |||
|cluster_id=chrX:80377118..80377149,- | |||
|coexpression_cluster_id=C1098 | |||
|description=CAGE_peak_1_at_HMGN5_5end | |||
|id=chrX:80377118..80377149,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0008947;8.97e-07;29 | |||
|ontology_enrichment_disease=DOID:2531!2.74e-15!51;DOID:0060083!2.74e-15!51;DOID:1240!7.52e-14!39;DOID:14566!2.59e-13!239;DOID:162!4.34e-13!235;DOID:8692!2.56e-11!31;DOID:0050686!1.14e-09!137 | |||
|ontology_enrichment_disease_v019=DOID:1240;1.85e-12;39!DOID:8692;1.06e-11;31!DOID:2531;1.10e-10;51!DOID:0060083;1.10e-10;51 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,1.17e-16,51;DOID:0060083,1.17e-16,51;DOID:162,6.64e-15,235;DOID:14566,9.98e-15,239;DOID:1240,1.19e-14,39;DOID:8692,1.50e-11,31;DOID:0050686,9.91e-11,137 | |||
|ontology_enrichment_uberon=UBERON:0002346!1.03e-07!90;UBERON:0005743!2.88e-07!86;UBERON:0001017!3.98e-07!82;UBERON:0000073!4.05e-07!94;UBERON:0001016!4.05e-07!94;UBERON:0003080!4.49e-07!42;UBERON:0001049!4.81e-07!57;UBERON:0005068!4.81e-07!57;UBERON:0006241!4.81e-07!57;UBERON:0007135!4.81e-07!57;UBERON:0002780!7.32e-07!41;UBERON:0001890!7.32e-07!41;UBERON:0006240!7.32e-07!41;UBERON:0003075!9.06e-07!86;UBERON:0007284!9.06e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;2.66e-07;9!UBERON:0001557;2.66e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0011216,1.79e-07,223;UBERON:0001737,2.79e-07,9;UBERON:0001016,3.85e-07,89;UBERON:0001017,3.91e-07,81;UBERON:0002346,4.83e-07,86;UBERON:0001049,6.84e-07,56;UBERON:0005068,6.84e-07,56;UBERON:0006241,6.84e-07,56;UBERON:0007135,6.84e-07,56;UBERON:0002780,7.10e-07,41;UBERON:0001890,7.10e-07,41;UBERON:0003080,7.10e-07,41;UBERON:0006240,7.10e-07,41 | |||
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| ||
|short_description=p1@HMGN5 | |||
}} | }} |
Latest revision as of 12:39, 16 September 2015
Short description: | p1@HMGN5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_HMGN5_5end |
Coexpression cluster: | C1098_acute_teratocarcinoma_myelodysplastic_colon_adult_Mast_merkel |
Association with transcript: | 0bp_to_ENST00000373250_5end |
EntrezGene: | HMGN5 |
HGNC: | 8013 |
UniProt: | Q5JSK6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
organ system subdivision | 1.79e-07 | 223 |
larynx | 2.79e-07 | 9 |
nervous system | 3.85e-07 | 89 |
central nervous system | 3.91e-07 | 81 |
neurectoderm | 4.83e-07 | 86 |
neural tube | 6.84e-07 | 56 |
neural rod | 6.84e-07 | 56 |
future spinal cord | 6.84e-07 | 56 |
neural keel | 6.84e-07 | 56 |
regional part of forebrain | 7.10e-07 | 41 |
forebrain | 7.10e-07 | 41 |
anterior neural tube | 7.10e-07 | 41 |
future forebrain | 7.10e-07 | 41 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 1.17e-16 | 51 |
immune system cancer | 1.17e-16 | 51 |
cancer | 6.64e-15 | 235 |
disease of cellular proliferation | 9.98e-15 | 239 |
leukemia | 1.19e-14 | 39 |
myeloid leukemia | 1.50e-11 | 31 |
organ system cancer | 9.91e-11 | 137 |