FFCP PHASE1:Hg19::chr9:139651984..139652012,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=138307 | |EntrezGene=138307 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=27038 | |HGNC=27038 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000482893_5end | |association_with_transcript=0bp_to_ENST00000482893_5end | ||
|cluster_id=chr9:139651984..139652012,- | |||
|description=CAGE_peak_2_at_LCN8_5end | |description=CAGE_peak_2_at_LCN8_5end | ||
|id=chr9:139651984..139652012,- | |id=chr9:139651984..139652012,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;1.16e-117;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0006947!3.03e-17!3;UBERON:0004054!3.03e-17!3;UBERON:0005904!4.61e-13!4;UBERON:0003135!4.29e-12!11;UBERON:0004733!2.50e-11!12;UBERON:0002028!2.50e-11!12;UBERON:0007277!2.50e-11!12;UBERON:0007023!5.18e-11!115;UBERON:0004732!1.96e-10!13;UBERON:0002037!3.98e-09!6;UBERON:0006215!3.98e-09!6;UBERON:0003076!5.26e-09!15;UBERON:0003057!5.26e-09!15;UBERON:0001896!6.05e-08!3;UBERON:0005290!6.05e-08!3;UBERON:0010096!6.05e-08!3;UBERON:0000998!5.75e-07!1;UBERON:0006868!5.75e-07!1;UBERON:0001000!7.60e-07!1;UBERON:0005352!7.60e-07!1;UBERON:0001301!8.49e-07!1 | |ontology_enrichment_uberon=UBERON:0006947!3.03e-17!3;UBERON:0004054!3.03e-17!3;UBERON:0005904!4.61e-13!4;UBERON:0003135!4.29e-12!11;UBERON:0004733!2.50e-11!12;UBERON:0002028!2.50e-11!12;UBERON:0007277!2.50e-11!12;UBERON:0007023!5.18e-11!115;UBERON:0004732!1.96e-10!13;UBERON:0002037!3.98e-09!6;UBERON:0006215!3.98e-09!6;UBERON:0003076!5.26e-09!15;UBERON:0003057!5.26e-09!15;UBERON:0001896!6.05e-08!3;UBERON:0005290!6.05e-08!3;UBERON:0010096!6.05e-08!3;UBERON:0000998!5.75e-07!1;UBERON:0006868!5.75e-07!1;UBERON:0001000!7.60e-07!1;UBERON:0005352!7.60e-07!1;UBERON:0001301!8.49e-07!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0002037;1.82e-59;6!UBERON:0002680;4.97e-40;9!UBERON:0001895;4.97e-40;9!UBERON:0004733;2.71e-30;12!UBERON:0002028;2.71e-30;12!UBERON:0004732;4.82e-28;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,1.82e-59,6;UBERON:0006215,1.82e-59,6;UBERON:0002680,4.97e-40,9;UBERON:0001895,4.97e-40,9;UBERON:0010092,4.97e-40,9;UBERON:0004733,2.71e-30,12;UBERON:0002028,2.71e-30,12;UBERON:0007277,2.71e-30,12;UBERON:0004732,4.82e-28,13;UBERON:0003076,1.93e-24,15;UBERON:0003057,1.93e-24,15;UBERON:0000073,2.17e-07,53;UBERON:0002616,2.17e-07,53;UBERON:0001049,4.88e-07,56;UBERON:0005068,4.88e-07,56;UBERON:0006241,4.88e-07,56;UBERON:0007135,4.88e-07,56 | |||
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|short_description=p2@LCN8 | |short_description=p2@LCN8 | ||
}} | }} |
Latest revision as of 13:08, 16 September 2015
Short description: | p2@LCN8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_LCN8_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000482893_5end |
EntrezGene: | LCN8 |
HGNC: | 27038 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cerebellum | 1.82e-59 | 6 |
rhombic lip | 1.82e-59 | 6 |
regional part of metencephalon | 4.97e-40 | 9 |
metencephalon | 4.97e-40 | 9 |
future metencephalon | 4.97e-40 | 9 |
segmental subdivision of hindbrain | 2.71e-30 | 12 |
hindbrain | 2.71e-30 | 12 |
presumptive hindbrain | 2.71e-30 | 12 |
segmental subdivision of nervous system | 4.82e-28 | 13 |
posterior neural tube | 1.93e-24 | 15 |
chordal neural plate | 1.93e-24 | 15 |
regional part of nervous system | 2.17e-07 | 53 |
regional part of brain | 2.17e-07 | 53 |
neural tube | 4.88e-07 | 56 |
neural rod | 4.88e-07 | 56 |
future spinal cord | 4.88e-07 | 56 |
neural keel | 4.88e-07 | 56 |