FFCP PHASE1:Hg19::chr19:18063044..18063072,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3780 | |EntrezGene=3780 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=6290 | |HGNC=6290 | ||
|TSSclassifier=strong | |||
|UniProt=B4DP30 | |UniProt=B4DP30 | ||
|association_with_transcript=-21bp_to_ENST00000536713,uc010xqa.1_5end | |association_with_transcript=-21bp_to_ENST00000536713,uc010xqa.1_5end | ||
|cluster_id=chr19:18063044..18063072,+ | |||
|description=CAGE_peak_2_at_KCNN1_5end | |description=CAGE_peak_2_at_KCNN1_5end | ||
|id=chr19:18063044..18063072,+ | |id=chr19:18063044..18063072,+ | ||
|ontology_enrichment_celltype=CL:0000540!1.30e-11!6;CL:0000031!1.30e-11!6;CL:0000404!1.30e-11!6;CL:0000453!2.10e-11!5;CL:0002322!1.35e-10!5;CL:0000047!1.77e-08!8 | |ontology_enrichment_celltype=CL:0000540!1.30e-11!6;CL:0000031!1.30e-11!6;CL:0000404!1.30e-11!6;CL:0000453!2.10e-11!5;CL:0002322!1.35e-10!5;CL:0000047!1.77e-08!8 | ||
|ontology_enrichment_celltype_v019=CL:0000453;7.41e-24;5!CL:0002322;4.65e-22;5!CL:0000990;3.93e-13;8!CL:0000451;1.10e-10;10!CL:0001014;2.12e-10;2!CL:0001016;2.12e-10;2!CL:0002321;3.42e-10;15!CL:0000123;1.09e-09;2!CL:0000242;1.09e-09;2!CL:0000540;2.31e-07;6!CL:0000404;2.31e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000453,6.77e-24,5;CL:0002322,4.66e-22,5;CL:0000990,3.75e-13,8;CL:0000451,1.06e-10,10;CL:0001014,2.12e-10,2;CL:0001016,2.12e-10,2;CL:0000242,9.53e-10,2;CL:0000540,2.33e-07,6;CL:0000031,2.33e-07,6;CL:0000404,2.33e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000031;2.31e-07;6 | |||
|ontology_enrichment_disease=DOID:3095!1.25e-10!22;DOID:2994!1.25e-10!22;DOID:171!1.27e-09!10 | |ontology_enrichment_disease=DOID:3095!1.25e-10!22;DOID:2994!1.25e-10!22;DOID:171!1.27e-09!10 | ||
|ontology_enrichment_disease_v019=DOID:171;1.52e-11;10!DOID:3095;1.81e-09;22!DOID:2994;1.81e-09;22 | |||
|ontology_enrichment_disease_v019_2=DOID:171,1.33e-11,10;DOID:3095,1.69e-09,22;DOID:2994,1.69e-09,22 | |||
|ontology_enrichment_uberon=UBERON:0001950!9.22e-20!20;UBERON:0002619!1.22e-17!22;UBERON:0001017!2.69e-15!82;UBERON:0000073!2.85e-15!94;UBERON:0001016!2.85e-15!94;UBERON:0000956!4.40e-15!25;UBERON:0000203!4.40e-15!25;UBERON:0001893!1.35e-14!34;UBERON:0001869!3.33e-14!32;UBERON:0005743!3.53e-14!86;UBERON:0002791!2.20e-13!33;UBERON:0002780!8.48e-13!41;UBERON:0001890!8.48e-13!41;UBERON:0006240!8.48e-13!41;UBERON:0003080!2.26e-12!42;UBERON:0002020!1.79e-11!34;UBERON:0003528!1.79e-11!34;UBERON:0000200!1.46e-10!6;UBERON:0001872!3.10e-10!5;UBERON:0000955!7.40e-10!69;UBERON:0006238!7.40e-10!69;UBERON:0002346!1.48e-09!90;UBERON:0001049!1.08e-08!57;UBERON:0005068!1.08e-08!57;UBERON:0006241!1.08e-08!57;UBERON:0007135!1.08e-08!57;UBERON:0000924!2.28e-08!173;UBERON:0006601!2.28e-08!173;UBERON:0002616!3.16e-08!59;UBERON:0000473!4.03e-08!8;UBERON:0003056!5.17e-08!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0002346;4.59e-19;4!UBERON:0000923;4.59e-19;4!UBERON:0010316;4.59e-19;4!UBERON:0005291;4.59e-19;4!UBERON:0002050;2.82e-15;5!UBERON:0005423;2.82e-15;5!UBERON:0001872;2.89e-14;5!UBERON:0000922;4.62e-14;49!UBERON:0001950;2.86e-12;20!UBERON:0002619;4.28e-11;22!UBERON:0000956;1.13e-09;25!UBERON:0000203;1.13e-09;25!UBERON:0001869;1.15e-08;32!UBERON:0001893;8.90e-08;34!UBERON:0002780;3.07e-07;41!UBERON:0001890;3.07e-07;41!UBERON:0002791;9.02e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001872,3.57e-14,5;UBERON:0001950,3.84e-12,20;UBERON:0002619,5.59e-11,22;UBERON:0000956,1.43e-09,25;UBERON:0000203,1.43e-09,25;UBERON:0001869,3.72e-09,32;UBERON:0001016,9.42e-09,89;UBERON:0001017,1.13e-08,81;UBERON:0001893,1.51e-08,34;UBERON:0002780,1.64e-08,41;UBERON:0001890,1.64e-08,41;UBERON:0003080,1.64e-08,41;UBERON:0006240,1.64e-08,41;UBERON:0002346,3.18e-08,86;UBERON:0004121,2.23e-07,171;UBERON:0000924,2.23e-07,171;UBERON:0006601,2.23e-07,171;UBERON:0002791,2.76e-07,32;UBERON:0003528,8.42e-07,34;UBERON:0002020,8.42e-07,34 | |||
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| ||
|short_description=p2@KCNN1 | |short_description=p2@KCNN1 | ||
}} | }} |
Latest revision as of 13:26, 16 September 2015
Short description: | p2@KCNN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_KCNN1_5end |
Coexpression cluster: | NA |
Association with transcript: | -21bp_to_ENST00000536713, uc010xqa.1_5end |
EntrezGene: | KCNN1 |
HGNC: | 6290 |
UniProt: | B4DP30 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Langerhans cell | 6.77e-24 | 5 |
embryonic stem cell | 4.66e-22 | 5 |
conventional dendritic cell | 3.75e-13 | 8 |
dendritic cell | 1.06e-10 | 10 |
CD1a-positive Langerhans cell | 2.12e-10 | 2 |
immature CD1a-positive Langerhans cell | 2.12e-10 | 2 |
Merkel cell | 9.53e-10 | 2 |
neuron | 2.33e-07 | 6 |
neuroblast | 2.33e-07 | 6 |
electrically signaling cell | 2.33e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
parietal lobe | 3.57e-14 | 5 |
neocortex | 3.84e-12 | 20 |
regional part of cerebral cortex | 5.59e-11 | 22 |
cerebral cortex | 1.43e-09 | 25 |
pallium | 1.43e-09 | 25 |
cerebral hemisphere | 3.72e-09 | 32 |
nervous system | 9.42e-09 | 89 |
central nervous system | 1.13e-08 | 81 |
telencephalon | 1.51e-08 | 34 |
regional part of forebrain | 1.64e-08 | 41 |
forebrain | 1.64e-08 | 41 |
anterior neural tube | 1.64e-08 | 41 |
future forebrain | 1.64e-08 | 41 |
neurectoderm | 3.18e-08 | 86 |
ectoderm-derived structure | 2.23e-07 | 171 |
ectoderm | 2.23e-07 | 171 |
presumptive ectoderm | 2.23e-07 | 171 |
regional part of telencephalon | 2.76e-07 | 32 |
brain grey matter | 8.42e-07 | 34 |
gray matter | 8.42e-07 | 34 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 1.33e-11 | 10 |
germ cell and embryonal cancer | 1.69e-09 | 22 |
germ cell cancer | 1.69e-09 | 22 |