FFCP PHASE1:Hg19::chr1:236228490..236228507,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4811 | |EntrezGene=4811 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7821 | |HGNC=7821 | ||
|TSSclassifier=strong | |||
|UniProt=P14543 | |UniProt=P14543 | ||
|association_with_transcript=-9bp_to_NM_002508,uc001hxo.2,uc009xgd.2_5end | |association_with_transcript=-9bp_to_NM_002508,uc001hxo.2,uc009xgd.2_5end | ||
|cluster_id=chr1:236228490..236228507,- | |||
|coexpression_cluster_id=C2574 | |coexpression_cluster_id=C2574 | ||
|description=CAGE_peak_4_at_NID1_5end | |description=CAGE_peak_4_at_NID1_5end | ||
|id=chr1:236228490..236228507,- | |id=chr1:236228490..236228507,- | ||
|ontology_enrichment_celltype=CL:0000055!9.71e-29!180;CL:0000057!6.78e-20!75;CL:0000222!2.07e-18!119;CL:0000115!2.14e-12!35;CL:0000048!2.21e-12!430;CL:0000144!3.27e-12!625;CL:0002371!5.52e-12!591;CL:0002078!8.38e-12!44;CL:0000723!2.36e-11!436;CL:0000183!2.68e-10!59;CL:0002139!3.73e-10!24;CL:0000034!3.76e-10!444;CL:0000213!1.49e-09!57;CL:0000215!1.49e-09!57;CL:0000680!3.25e-09!57;CL:0000056!3.25e-09!57;CL:0000355!3.25e-09!57;CL:0002620!8.48e-09!23;CL:0000187!1.49e-08!54;CL:0000071!1.67e-07!18;CL:0002546!1.67e-07!18;CL:0000393!7.74e-07!60;CL:0000211!7.74e-07!60;CL:0000548!9.76e-07!679;CL:0000004!9.76e-07!679;CL:0000255!9.76e-07!679 | |ontology_enrichment_celltype=CL:0000055!9.71e-29!180;CL:0000057!6.78e-20!75;CL:0000222!2.07e-18!119;CL:0000115!2.14e-12!35;CL:0000048!2.21e-12!430;CL:0000144!3.27e-12!625;CL:0002371!5.52e-12!591;CL:0002078!8.38e-12!44;CL:0000723!2.36e-11!436;CL:0000183!2.68e-10!59;CL:0002139!3.73e-10!24;CL:0000034!3.76e-10!444;CL:0000213!1.49e-09!57;CL:0000215!1.49e-09!57;CL:0000680!3.25e-09!57;CL:0000056!3.25e-09!57;CL:0000355!3.25e-09!57;CL:0002620!8.48e-09!23;CL:0000187!1.49e-08!54;CL:0000071!1.67e-07!18;CL:0002546!1.67e-07!18;CL:0000393!7.74e-07!60;CL:0000211!7.74e-07!60;CL:0000548!9.76e-07!679;CL:0000004!9.76e-07!679;CL:0000255!9.76e-07!679 | ||
|ontology_enrichment_celltype_v019=CL:0000115;5.40e-11;36!CL:0002139;3.38e-10;24!CL:0002620;8.52e-10;23!CL:0000057;1.69e-09;73!CL:0002078;9.15e-08;45!CL:0000071;2.60e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,9.15e-22,76;CL:0000222,4.98e-17,121;CL:0000048,1.21e-15,427;CL:0000723,3.03e-14,433;CL:0000115,5.87e-13,36;CL:0000034,1.68e-12,441;CL:0002078,8.81e-12,45;CL:0002139,2.46e-10,24;CL:0002620,2.67e-09,23;CL:0002320,7.52e-09,361;CL:0000680,7.79e-09,58;CL:0000056,7.79e-09,58;CL:0000355,7.79e-09,58;CL:0000213,8.38e-09,58;CL:0000215,8.38e-09,58;CL:0000219,3.60e-08,386;CL:0000187,3.78e-08,55;CL:0000134,1.04e-07,354;CL:0000071,1.61e-07,18;CL:0002546,1.61e-07,18 | |||
|ontology_enrichment_development_v019=CL:0002546;2.60e-07;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!6.92e-17!79;UBERON:0007798!6.92e-17!79;UBERON:0004535!7.93e-16!110;UBERON:0003914!8.31e-16!118;UBERON:0001009!1.21e-15!113;UBERON:0004872!1.80e-15!84;UBERON:0000490!4.04e-14!138;UBERON:0005256!3.63e-13!143;UBERON:0000055!7.75e-13!69;UBERON:0000468!1.65e-12!659;UBERON:0001981!1.46e-10!60;UBERON:0007500!1.46e-10!60;UBERON:0004537!1.46e-10!60;UBERON:0006965!1.46e-10!60;UBERON:0000467!1.91e-10!625;UBERON:0000480!3.32e-10!626;UBERON:0000926!4.43e-10!448;UBERON:0004120!4.43e-10!448;UBERON:0006603!4.43e-10!448;UBERON:0004290!1.21e-09!70;UBERON:0000914!1.57e-09!83;UBERON:0002329!1.57e-09!83;UBERON:0003077!1.57e-09!83;UBERON:0003059!1.57e-09!83;UBERON:0007282!1.57e-09!83;UBERON:0009618!1.57e-09!83;UBERON:0007285!1.57e-09!83;UBERON:0001134!5.96e-09!61;UBERON:0002036!5.96e-09!61;UBERON:0003082!5.96e-09!61;UBERON:0002385!7.31e-09!63;UBERON:0001015!7.31e-09!63;UBERON:0000383!7.31e-09!63;UBERON:0002100!3.12e-08!216;UBERON:0003081!3.73e-08!216;UBERON:0000486!4.18e-08!82;UBERON:0001986!1.67e-07!18;UBERON:0004638!1.67e-07!18;UBERON:0004852!1.67e-07!18;UBERON:0002107!2.76e-07!19;UBERON:0006925!2.76e-07!19;UBERON:0008836!2.76e-07!19;UBERON:0002417!3.84e-07!61;UBERON:0000916!3.84e-07!61;UBERON:0002199!4.49e-07!45;UBERON:0002416!4.49e-07!45;UBERON:0000119!5.29e-07!312;UBERON:0001637!8.96e-07!42;UBERON:0003509!8.96e-07!42;UBERON:0004572!8.96e-07!42 | |ontology_enrichment_uberon=UBERON:0002049!6.92e-17!79;UBERON:0007798!6.92e-17!79;UBERON:0004535!7.93e-16!110;UBERON:0003914!8.31e-16!118;UBERON:0001009!1.21e-15!113;UBERON:0004872!1.80e-15!84;UBERON:0000490!4.04e-14!138;UBERON:0005256!3.63e-13!143;UBERON:0000055!7.75e-13!69;UBERON:0000468!1.65e-12!659;UBERON:0001981!1.46e-10!60;UBERON:0007500!1.46e-10!60;UBERON:0004537!1.46e-10!60;UBERON:0006965!1.46e-10!60;UBERON:0000467!1.91e-10!625;UBERON:0000480!3.32e-10!626;UBERON:0000926!4.43e-10!448;UBERON:0004120!4.43e-10!448;UBERON:0006603!4.43e-10!448;UBERON:0004290!1.21e-09!70;UBERON:0000914!1.57e-09!83;UBERON:0002329!1.57e-09!83;UBERON:0003077!1.57e-09!83;UBERON:0003059!1.57e-09!83;UBERON:0007282!1.57e-09!83;UBERON:0009618!1.57e-09!83;UBERON:0007285!1.57e-09!83;UBERON:0001134!5.96e-09!61;UBERON:0002036!5.96e-09!61;UBERON:0003082!5.96e-09!61;UBERON:0002385!7.31e-09!63;UBERON:0001015!7.31e-09!63;UBERON:0000383!7.31e-09!63;UBERON:0002100!3.12e-08!216;UBERON:0003081!3.73e-08!216;UBERON:0000486!4.18e-08!82;UBERON:0001986!1.67e-07!18;UBERON:0004638!1.67e-07!18;UBERON:0004852!1.67e-07!18;UBERON:0002107!2.76e-07!19;UBERON:0006925!2.76e-07!19;UBERON:0008836!2.76e-07!19;UBERON:0002417!3.84e-07!61;UBERON:0000916!3.84e-07!61;UBERON:0002199!4.49e-07!45;UBERON:0002416!4.49e-07!45;UBERON:0000119!5.29e-07!312;UBERON:0001637!8.96e-07!42;UBERON:0003509!8.96e-07!42;UBERON:0004572!8.96e-07!42 | ||
|ontology_enrichment_uberon_v019=UBERON:0002107;9.11e-08;19!UBERON:0006925;9.11e-08;19!UBERON:0004638;2.60e-07;18!UBERON:0001986;2.60e-07;18!UBERON:0004852;2.60e-07;18!UBERON:0002049;4.75e-07;75!UBERON:0007798;4.75e-07;75!UBERON:0000055;6.19e-07;65 | |||
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| ||
|short_description=p4@NID1 | |short_description=p4@NID1 | ||
}} | }} |
Latest revision as of 13:55, 16 September 2015
Short description: | p4@NID1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_NID1_5end |
Coexpression cluster: | C2574_Mesenchymal_Pericytes_Fibroblast_Adipocyte_Nucleus_Meningeal_stomach |
Association with transcript: | -9bp_to_NM_002508, uc001hxo.2, uc009xgd.2_5end |
EntrezGene: | NID1 |
HGNC: | 7821 |
UniProt: | P14543 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 9.15e-22 | 76 |
mesodermal cell | 4.98e-17 | 121 |
multi fate stem cell | 1.21e-15 | 427 |
somatic stem cell | 3.03e-14 | 433 |
endothelial cell | 5.87e-13 | 36 |
stem cell | 1.68e-12 | 441 |
meso-epithelial cell | 8.81e-12 | 45 |
endothelial cell of vascular tree | 2.46e-10 | 24 |
skin fibroblast | 2.67e-09 | 23 |
connective tissue cell | 7.52e-09 | 361 |
muscle precursor cell | 7.79e-09 | 58 |
myoblast | 7.79e-09 | 58 |
multi-potent skeletal muscle stem cell | 7.79e-09 | 58 |
lining cell | 8.38e-09 | 58 |
barrier cell | 8.38e-09 | 58 |
motile cell | 3.60e-08 | 386 |
muscle cell | 3.78e-08 | 55 |
mesenchymal cell | 1.04e-07 | 354 |
blood vessel endothelial cell | 1.61e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.61e-07 | 18 |