FFCP PHASE1:Hg19::chr4:166794748..166794753,+: Difference between revisions
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|id=chr4:166794748..166794753,+
|short_description=p20@TLL1
|description=CAGE_peak_20_at_TLL1_5end
|association_with_transcript=-84bp_to_ENST00000504560_5end
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7092 | |EntrezGene=7092 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11843 | |HGNC=11843 | ||
|TSSclassifier=strong | |||
|UniProt=D6RAK5 | |UniProt=D6RAK5 | ||
|association_with_transcript=-84bp_to_ENST00000504560_5end | |||
|cluster_id=chr4:166794748..166794753,+ | |||
|coexpression_cluster_id=C11 | |||
|description=CAGE_peak_20_at_TLL1_5end | |||
|id=chr4:166794748..166794753,+ | |||
|ontology_enrichment_celltype=CL:0002598!1.88e-08!1 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;8.98e-131;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004733!3.21e-28!12;UBERON:0002028!3.21e-28!12;UBERON:0007277!3.21e-28!12;UBERON:0004732!5.44e-26!13;UBERON:0003076!2.02e-22!15;UBERON:0003057!2.02e-22!15;UBERON:0002680!1.33e-19!9;UBERON:0001895!1.33e-19!9;UBERON:0010092!1.33e-19!9;UBERON:0002298!3.82e-14!8;UBERON:0007023!5.30e-14!115;UBERON:0002037!1.36e-11!6;UBERON:0006215!1.36e-11!6;UBERON:0001896!1.62e-10!3;UBERON:0005290!1.62e-10!3;UBERON:0010096!1.62e-10!3;UBERON:0000988!5.42e-10!3;UBERON:0001049!2.42e-08!57;UBERON:0005068!2.42e-08!57;UBERON:0006241!2.42e-08!57;UBERON:0007135!2.42e-08!57;UBERON:0000073!4.02e-08!94;UBERON:0001016!4.02e-08!94;UBERON:0000955!4.07e-08!69;UBERON:0006238!4.07e-08!69;UBERON:0001017!4.47e-08!82;UBERON:0002616!5.12e-08!59;UBERON:0001882!6.24e-08!1;UBERON:0005403!6.24e-08!1;UBERON:0005743!1.27e-07!86;UBERON:0000063!9.30e-07!97 | |||
|ontology_enrichment_uberon_v019=UBERON:0002037;2.83e-66;6!UBERON:0002680;9.75e-45;9!UBERON:0001895;9.75e-45;9!UBERON:0004733;5.98e-34;12!UBERON:0002028;5.98e-34;12!UBERON:0004732;1.86e-31;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,2.83e-66,6;UBERON:0006215,2.83e-66,6;UBERON:0002680,9.75e-45,9;UBERON:0001895,9.75e-45,9;UBERON:0010092,9.75e-45,9;UBERON:0004733,5.98e-34,12;UBERON:0002028,5.98e-34,12;UBERON:0007277,5.98e-34,12;UBERON:0004732,1.86e-31,13;UBERON:0003076,1.82e-27,15;UBERON:0003057,1.82e-27,15;UBERON:0000073,1.34e-08,53;UBERON:0002616,1.34e-08,53;UBERON:0001049,3.28e-08,56;UBERON:0005068,3.28e-08,56;UBERON:0006241,3.28e-08,56;UBERON:0007135,3.28e-08,56;UBERON:0000955,6.59e-07,68;UBERON:0006238,6.59e-07,68 | |||
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|short_description=p20@TLL1 | |||
}} | }} |
Latest revision as of 14:51, 16 September 2015
Short description: | p20@TLL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_20_at_TLL1_5end |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | -84bp_to_ENST00000504560_5end |
EntrezGene: | TLL1 |
HGNC: | 11843 |
UniProt: | D6RAK5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cerebellum | 2.83e-66 | 6 |
rhombic lip | 2.83e-66 | 6 |
regional part of metencephalon | 9.75e-45 | 9 |
metencephalon | 9.75e-45 | 9 |
future metencephalon | 9.75e-45 | 9 |
segmental subdivision of hindbrain | 5.98e-34 | 12 |
hindbrain | 5.98e-34 | 12 |
presumptive hindbrain | 5.98e-34 | 12 |
segmental subdivision of nervous system | 1.86e-31 | 13 |
posterior neural tube | 1.82e-27 | 15 |
chordal neural plate | 1.82e-27 | 15 |
regional part of nervous system | 1.34e-08 | 53 |
regional part of brain | 1.34e-08 | 53 |
neural tube | 3.28e-08 | 56 |
neural rod | 3.28e-08 | 56 |
future spinal cord | 3.28e-08 | 56 |
neural keel | 3.28e-08 | 56 |
brain | 6.59e-07 | 68 |
future brain | 6.59e-07 | 68 |