FFCP PHASE1:Hg19::chr6:160147703..160147742,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr6:160147703..160147742,+ to FFCP PHASE1:Hg19::chr6:160147703..160147742,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9589 | |EntrezGene=9589 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=16846 | |HGNC=16846 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-386bp_to_uc010kjx.2_5end | |||
|cluster_id=chr6:160147703..160147742,+ | |||
|description=CAGE_peak_6_at_WTAP_5end | |||
|id=chr6:160147703..160147742,+ | |||
|ontology_enrichment_celltype=CL:0002057!2.65e-24!42;CL:0000860!1.22e-23!45;CL:0000738!1.69e-15!140;CL:0002087!4.37e-15!119;CL:0002031!2.29e-14!124;CL:0002009!3.98e-14!65;CL:0000037!4.33e-14!172;CL:0000566!4.33e-14!172;CL:0002194!5.08e-14!63;CL:0000576!5.08e-14!63;CL:0000040!5.08e-14!63;CL:0000559!5.08e-14!63;CL:0002032!1.94e-13!165;CL:0000837!1.94e-13!165;CL:0000766!2.99e-13!76;CL:0000839!1.10e-12!70;CL:0000988!1.37e-12!182;CL:0000557!1.52e-12!71;CL:0000763!3.45e-11!112;CL:0000049!3.45e-11!112 | |||
|ontology_enrichment_celltype_v019=CL:0000860;9.98e-71;33!CL:0002057;9.98e-71;33!CL:0000473;8.74e-49;39!CL:0000234;8.74e-49;39!CL:0000576;3.34e-34;48!CL:0000766;3.66e-19;69!CL:0002087;1.47e-12;104!CL:0000763;1.54e-11;100!CL:0000738;6.76e-09;136!CL:0000817;4.08e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,9.18e-63,42;CL:0002057,9.18e-63,42;CL:0000473,2.76e-54,48;CL:0000234,2.76e-54,48;CL:0002009,9.34e-45,61;CL:0002194,2.06e-42,59;CL:0000576,2.06e-42,59;CL:0000040,2.06e-42,59;CL:0000559,2.06e-42,59;CL:0000766,1.82e-40,72;CL:0000557,2.42e-40,67;CL:0000839,1.89e-37,66;CL:0000763,1.22e-27,108;CL:0000049,1.22e-27,108;CL:0000738,8.25e-27,136;CL:0002031,1.37e-26,120;CL:0002087,1.08e-25,115;CL:0002032,9.81e-22,161;CL:0000837,9.81e-22,161;CL:0000037,1.39e-20,168;CL:0000988,3.11e-19,177;CL:0000134,3.93e-08,354;CL:0002320,7.50e-08,361;CL:0000048,9.09e-08,427;CL:0000723,1.45e-07,433;CL:0000034,2.65e-07,441;CL:0000219,7.30e-07,386 | |||
|ontology_enrichment_development_v019=CL:0002057;8.19e-44;42!CL:0000049;3.24e-09;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!5.35e-13!80;UBERON:0001474!1.25e-12!86;UBERON:0002390!8.02e-12!102;UBERON:0003061!8.02e-12!102;UBERON:0004765!2.11e-10!101;UBERON:0001434!2.11e-10!101;UBERON:0002405!3.13e-10!115;UBERON:0002193!3.70e-10!112 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.30e-38,76;UBERON:0001474,4.73e-35,82;UBERON:0004765,1.72e-31,90;UBERON:0002405,2.60e-30,93;UBERON:0002390,1.66e-28,98;UBERON:0003061,1.66e-28,98;UBERON:0001434,7.83e-28,100;UBERON:0002193,2.17e-25,108;UBERON:0002204,5.30e-16,167;UBERON:0003081,1.17e-14,203;UBERON:0000926,5.16e-09,315;UBERON:0004120,5.16e-09,315;UBERON:0006603,5.16e-09,315;UBERON:0002384,1.81e-07,371 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0.261185628199839,0.245733936501509,0,0,0,0.123766352960047,0,0,0,1.46062018077475,0,0.123121058076788,0,0,0.286235987131057,0.273748850145768,0.125542639594803,0.0764134057479513,0.164201178899891,0.0787107813136792,0,0.767658796194425,0.928896739896456,0,0,0,0.232401601740905,0.142169232487422,0.587200878669695,0,0.401088894940283,0.434021741431704,0,0,0.257575567634187,1.01778767145695,0.755751887377619,0.485168122375632,0.697287110717054,0.822335776043652,1.54853185447552,2.01384674625505,3.58624989140741,1.89185783910868,1.03423704220986,2.5819387343353,1.35426486594342,0.752969358170419,1.36453075028923,1.57306439111559,2.44867113896722,2.88836124368484,2.55734850319616,1.9791078011203,2.59302754908121,0.426224750532694,2.03146467040009,3.40431134814684,3.73693349397345,1.25624332628372,2.08593167368081,1.95469960234605,0.605399502633369,3.31449872388808,2.21523671208619,0.422510572623884,0.637812899895131,0.628975936525128,0.112328631146495,0,0.32145117339416,0.285012743741249,0,0.365328307529268,0,0,0,0.426730222566507,1.20118796110804,0,0.661044872784862,0,0.569212969109448,1.17447437874188,0,0,0.560508562981536,0.263384084775077,0.393419540227666,0,0.205601498999509,0,0,0.473447805734733,0,0.222820913770347,0.294605907474837,0.221533894583621,0,0.128091319725675,0,0.164437904603676,0,0.289803085735052,0.296573126324121,0.267540828089713,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0.604820229674197,0.534880391567015,0.289648807765598,0,0,0.12786256184353,0,0,0,0,0.486634870302636,0,0,0.087834785693126,0.392937226493138,0,0,0,0,0.26591592103773,0.238490624305342,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53316637465883,0,0,1.31780417436063,0,0,0,0.12663051166458,0.264818361626438,0,0,0,0,0,0.311211035399766,0,0,0,0.576175924479999,0,0.312160076830321,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.635795703478686,0,0.103052529238439,0.257640540045629,0,0,0,0,0.184099797284599,0,0,0,0.339121184620975,0,0.818238361772504,0.573609190778008,0,0,0.116193942869518,0,0,0,0,0,1.38134921352481,0,0.721879481669586,0,0,0,0.55146986366197,0.217879444092406,0.237270619111097,0.134831308160164,0,0.38474715694639,0,0,0,0,0,0.982827216677626,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0,0.117408694235822,0.288732895522148,0,0.190254152234598,0,0,0,0.234004265139238,0,0.93733833986777,0.16798212819886,0.141775097242386,0,0,0,0,0,0.207328115540772,0,0.12624243342638,0.190493682876507,0,0,0,0.102827492703324,0,0,0,0.43596006883328,0.22001485746285,0,0,0.845302752556,0.26593811658487,0,0,1.41849132023278,0,0.142977993658148,0,0,0.325736184293735,0,0,0.301439377059586,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0.336255431980582,0.788123040807709,0.215627574859517,0.256686072559497,0,0,2.31986643833309,0.167516265334349,0,0,0,1.24324654030811,0.12269149171914,0.500170521059677,0,0,0.178428988797162,0,0,0.300946099727719,0,0,0.664225598535437,0,0.173767228936166,0,0,0,0.647142602455851,0.320182673410333,0,0,0,0.248107807818777,0.306923946576125,0.280660094433074,0.128139149255701,0.511707249066704,0,0,0.154209693802656,0.177561725313127,0,0.519254429183621,0,0.483437798366489,0.200506470303285,0.0920809889358963,0.114814448164607,0,0,0.451199612907412,0,0,0,0,1.13733384070897,0,0.215915916102139,0,0,0,0,0,0,0,0.261435451024901,0,0,0,0,0.366277859273374,0,0,0,0,0,0,0,0.137836572484531,0,0,0,0,0,0.192190067365106,0,0,0,0,0,0.308033580176089,0,0,0.37064843820784,0.143124886741991,0,0,0,0,0,0,0,0.359744915166629,0.274537029736055,0.235624804691373,0,0,0,0,0.243713489631284,0,0,0,0,0.551365343546124,0,0.438450885253763,0,0,0,0,0,0.143411352204052,0,0,0,0.422215270595328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.79312517629427,0,0,0,0,7.0691914358458,0.0711418433484141,0.159426272728822,0.399158742865633,0.383010740264733,0.423347165447766,0,0.280797178113459,0,0,0,0,0,0.201799707191048,0,0.343505344755765,0,0,0,0.19538809540204,0,0,0,0.33307196799782,0,0,0.293016358543788,0.121360521749513,0,0,0.23874448473769,0,0,0,0.140669416410513,0,0.494411622680279,0.63337622438398,0.19924798825107,0,1.25966373927138,0.613612095012929,0,0,0.0898683511473268,0,0,0.197286811273867,0,0,0,0,0,0.260427761085233,0.0874599999961957,0.724999575434793,0,0,0.236387681767936,0.344743373241465,0,0.520874984799877,0,0.120596438625408,0,0.442317039724898,0,0.219385397153973,0,0.278847488557207,0.0769502585037971,0.113942055847001,0,0.179515288819544,0.108647371922008,0,0.183195186803725,0,0,0.31396051279005,0.166211681900156,0,0.19606253431774,0,0,0.317873157960757,0,0.489698424477443,0.141353071433941,0.432777279484182,0,0.265372693510018,0.611030144933625,0.296521128680622,0.370691816839509,0,0.067401132980677,0,0,0.547364367646998,0,0,0,0,0,0.126373159256976,3.60776206594782,0.207376382794494,0,0,0.313932918407225,0,0,0,0,0.0979923974143777,0.0870592065804026,0.17472666824203,0,0.290268993867255,0,0.164230914106418,0.0969890164884194,0.264768380074501,0,0,0,0.0633107959558787,0,0,0,0,0,0,0.171594997861965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| ||
|short_description=p6@WTAP | |||
}} | }} |
Latest revision as of 15:12, 16 September 2015
Short description: | p6@WTAP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_WTAP_5end |
Coexpression cluster: | NA |
Association with transcript: | -386bp_to_uc010kjx.2_5end |
EntrezGene: | WTAP |
HGNC: | 16846 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 9.18e-63 | 42 |
CD14-positive, CD16-negative classical monocyte | 9.18e-63 | 42 |
defensive cell | 2.76e-54 | 48 |
phagocyte | 2.76e-54 | 48 |
macrophage dendritic cell progenitor | 9.34e-45 | 61 |
monopoietic cell | 2.06e-42 | 59 |
monocyte | 2.06e-42 | 59 |
monoblast | 2.06e-42 | 59 |
promonocyte | 2.06e-42 | 59 |
myeloid leukocyte | 1.82e-40 | 72 |
granulocyte monocyte progenitor cell | 2.42e-40 | 67 |
myeloid lineage restricted progenitor cell | 1.89e-37 | 66 |
myeloid cell | 1.22e-27 | 108 |
common myeloid progenitor | 1.22e-27 | 108 |
leukocyte | 8.25e-27 | 136 |
hematopoietic lineage restricted progenitor cell | 1.37e-26 | 120 |
nongranular leukocyte | 1.08e-25 | 115 |
hematopoietic oligopotent progenitor cell | 9.81e-22 | 161 |
hematopoietic multipotent progenitor cell | 9.81e-22 | 161 |
hematopoietic stem cell | 1.39e-20 | 168 |
hematopoietic cell | 3.11e-19 | 177 |
mesenchymal cell | 3.93e-08 | 354 |
connective tissue cell | 7.50e-08 | 361 |
multi fate stem cell | 9.09e-08 | 427 |
somatic stem cell | 1.45e-07 | 433 |
stem cell | 2.65e-07 | 441 |
motile cell | 7.30e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.30e-38 | 76 |
bone element | 4.73e-35 | 82 |
skeletal element | 1.72e-31 | 90 |
immune system | 2.60e-30 | 93 |
hematopoietic system | 1.66e-28 | 98 |
blood island | 1.66e-28 | 98 |
skeletal system | 7.83e-28 | 100 |
hemolymphoid system | 2.17e-25 | 108 |
musculoskeletal system | 5.30e-16 | 167 |
lateral plate mesoderm | 1.17e-14 | 203 |
mesoderm | 5.16e-09 | 315 |
mesoderm-derived structure | 5.16e-09 | 315 |
presumptive mesoderm | 5.16e-09 | 315 |
connective tissue | 1.81e-07 | 371 |