FFCP PHASE1:Hg19::chr10:119301716..119301729,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=18511 | |HGNC=18511 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=100bp_to_ENST00000450314_5end | |association_with_transcript=100bp_to_ENST00000450314_5end | ||
|cluster_id=chr10:119301716..119301729,- | |||
|coexpression_cluster_id=C1298 | |coexpression_cluster_id=C1298 | ||
|description=CAGE_peak_10_at_EMX2OS_5end | |description=CAGE_peak_10_at_EMX2OS_5end | ||
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|ontology_enrichment_celltype=CL:0002620!2.39e-17!23;CL:0000136!2.05e-10!15;CL:0000057!3.24e-08!75;CL:0000188!8.95e-07!9 | |ontology_enrichment_celltype=CL:0002620!2.39e-17!23;CL:0000136!2.05e-10!15;CL:0000057!3.24e-08!75;CL:0000188!8.95e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0002620;3.27e-27;23!CL:0002521;8.23e-09;3!CL:0000214;1.38e-08;3!CL:0002570;3.53e-07;8!CL:0000136;3.80e-07;13 | |ontology_enrichment_celltype_v019=CL:0002620;3.27e-27;23!CL:0002521;8.23e-09;3!CL:0000214;1.38e-08;3!CL:0002570;3.53e-07;8!CL:0000136;3.80e-07;13 | ||
|ontology_enrichment_celltype_v019_2=CL:0002620,3.81e-27,23;CL:0000136,2.65e-13,15;CL:0002521,8.73e-09,3;CL:0000214,1.66e-08,3;CL:0000057,3.95e-08,76;CL:0002570,3.32e-07,8 | |||
|ontology_enrichment_development_v019=UBERON:0007297;2.86e-12;2!UBERON:0005795;6.01e-09;10!UBERON:0000358;2.50e-07;1!UBERON:0005754;3.89e-07;1 | |ontology_enrichment_development_v019=UBERON:0007297;2.86e-12;2!UBERON:0005795;6.01e-09;10!UBERON:0000358;2.50e-07;1!UBERON:0005754;3.89e-07;1 | ||
|ontology_enrichment_disease=DOID:17!3.81e-08!5;DOID:450!3.81e-08!5;DOID:66!3.81e-08!5;DOID:423!3.81e-08!5;DOID:0080000!3.81e-08!5;DOID:11722!3.81e-08!5 | |ontology_enrichment_disease=DOID:17!3.81e-08!5;DOID:450!3.81e-08!5;DOID:66!3.81e-08!5;DOID:423!3.81e-08!5;DOID:0080000!3.81e-08!5;DOID:11722!3.81e-08!5 | ||
|ontology_enrichment_disease_v019=DOID:17;2.49e-18;5!DOID:450;2.49e-18;5!DOID:66;2.49e-18;5!DOID:423;2.49e-18;5!DOID:0080000;2.49e-18;5!DOID:11722;2.49e-18;5!DOID:0060084;3.01e-08;3!DOID:127;3.01e-08;3!DOID:2513;8.47e-07;1 | |ontology_enrichment_disease_v019=DOID:17;2.49e-18;5!DOID:450;2.49e-18;5!DOID:66;2.49e-18;5!DOID:423;2.49e-18;5!DOID:0080000;2.49e-18;5!DOID:11722;2.49e-18;5!DOID:0060084;3.01e-08;3!DOID:127;3.01e-08;3!DOID:2513;8.47e-07;1 | ||
|ontology_enrichment_disease_v019_2=DOID:17,2.45e-18,5;DOID:450,2.45e-18,5;DOID:66,2.45e-18,5;DOID:423,2.45e-18,5;DOID:0080000,2.45e-18,5;DOID:11722,2.45e-18,5;DOID:0060084,3.25e-08,3;DOID:127,3.25e-08,3;DOID:2513,8.02e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.58e-17!115;UBERON:0002199!9.11e-16!45;UBERON:0002416!9.11e-16!45;UBERON:0001893!8.92e-14!34;UBERON:0002020!9.13e-14!34;UBERON:0003528!9.13e-14!34;UBERON:0002097!1.01e-13!40;UBERON:0002791!3.80e-13!33;UBERON:0001869!2.68e-12!32;UBERON:0002780!1.20e-11!41;UBERON:0001890!1.20e-11!41;UBERON:0006240!1.20e-11!41;UBERON:0003080!3.21e-11!42;UBERON:0002616!7.90e-11!59;UBERON:0001049!1.98e-10!57;UBERON:0005068!1.98e-10!57;UBERON:0006241!1.98e-10!57;UBERON:0007135!1.98e-10!57;UBERON:0000475!7.52e-10!365;UBERON:0000956!2.52e-09!25;UBERON:0000203!2.52e-09!25;UBERON:0000955!8.33e-09!69;UBERON:0006238!8.33e-09!69;UBERON:0001017!2.78e-08!82;UBERON:0003075!2.97e-08!86;UBERON:0007284!2.97e-08!86;UBERON:0005743!3.15e-08!86;UBERON:0003056!3.57e-08!61;UBERON:0002619!3.63e-08!22;UBERON:0002346!4.14e-08!90;UBERON:0001013!4.40e-08!14;UBERON:0001950!9.07e-08!20;UBERON:0003102!2.55e-07!95 | |ontology_enrichment_uberon=UBERON:0007023!2.58e-17!115;UBERON:0002199!9.11e-16!45;UBERON:0002416!9.11e-16!45;UBERON:0001893!8.92e-14!34;UBERON:0002020!9.13e-14!34;UBERON:0003528!9.13e-14!34;UBERON:0002097!1.01e-13!40;UBERON:0002791!3.80e-13!33;UBERON:0001869!2.68e-12!32;UBERON:0002780!1.20e-11!41;UBERON:0001890!1.20e-11!41;UBERON:0006240!1.20e-11!41;UBERON:0003080!3.21e-11!42;UBERON:0002616!7.90e-11!59;UBERON:0001049!1.98e-10!57;UBERON:0005068!1.98e-10!57;UBERON:0006241!1.98e-10!57;UBERON:0007135!1.98e-10!57;UBERON:0000475!7.52e-10!365;UBERON:0000956!2.52e-09!25;UBERON:0000203!2.52e-09!25;UBERON:0000955!8.33e-09!69;UBERON:0006238!8.33e-09!69;UBERON:0001017!2.78e-08!82;UBERON:0003075!2.97e-08!86;UBERON:0007284!2.97e-08!86;UBERON:0005743!3.15e-08!86;UBERON:0003056!3.57e-08!61;UBERON:0002619!3.63e-08!22;UBERON:0002346!4.14e-08!90;UBERON:0001013!4.40e-08!14;UBERON:0001950!9.07e-08!20;UBERON:0003102!2.55e-07!95 | ||
|ontology_enrichment_uberon_v019=UBERON:0006947;7.04e-18;3!UBERON:0004054;7.04e-18;3!UBERON:0002199;1.36e-17;46!UBERON:0002416;1.36e-17;46!UBERON:0002097;1.43e-15;41!UBERON:0001013;1.82e-14;14!UBERON:0005904;1.52e-13;4!UBERON:0003102;1.10e-12;50!UBERON:0004175;3.55e-12;21!UBERON:0002190;8.23e-09;3!UBERON:0006915;1.38e-08;3!UBERON:0007616;1.38e-08;3!UBERON:0002217;1.38e-08;3!UBERON:0002018;1.38e-08;3!UBERON:0001000;2.50e-07;1!UBERON:0005352;2.50e-07;1!UBERON:0000998;3.89e-07;1!UBERON:0006868;3.89e-07;1!UBERON:0006834;8.47e-07;1!UBERON:0001301;8.47e-07;1 | |ontology_enrichment_uberon_v019=UBERON:0006947;7.04e-18;3!UBERON:0004054;7.04e-18;3!UBERON:0002199;1.36e-17;46!UBERON:0002416;1.36e-17;46!UBERON:0002097;1.43e-15;41!UBERON:0001013;1.82e-14;14!UBERON:0005904;1.52e-13;4!UBERON:0003102;1.10e-12;50!UBERON:0004175;3.55e-12;21!UBERON:0002190;8.23e-09;3!UBERON:0006915;1.38e-08;3!UBERON:0007616;1.38e-08;3!UBERON:0002217;1.38e-08;3!UBERON:0002018;1.38e-08;3!UBERON:0001000;2.50e-07;1!UBERON:0005352;2.50e-07;1!UBERON:0000998;3.89e-07;1!UBERON:0006868;3.89e-07;1!UBERON:0006834;8.47e-07;1!UBERON:0001301;8.47e-07;1 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002199,4.15e-24,46;UBERON:0002416,4.15e-24,46;UBERON:0002097,3.39e-20,41;UBERON:0006947,3.46e-18,3;UBERON:0004054,3.46e-18,3;UBERON:0001013,1.43e-14,14;UBERON:0005904,8.97e-14,4;UBERON:0004175,3.70e-10,25;UBERON:0003102,1.57e-09,99;UBERON:0002190,8.73e-09,3;UBERON:0006915,1.66e-08,3;UBERON:0007616,1.66e-08,3;UBERON:0002217,1.66e-08,3;UBERON:0002018,1.66e-08,3;UBERON:0001000,2.50e-07,1;UBERON:0005352,2.50e-07,1;UBERON:0000998,3.57e-07,1;UBERON:0006868,3.57e-07,1;UBERON:0001301,4.51e-07,1;UBERON:0006834,7.15e-07,1 | |||
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| ||
|short_description=p10@EMX2OS | |short_description=p10@EMX2OS | ||
}} | }} |
Latest revision as of 15:34, 16 September 2015
Short description: | p10@EMX2OS |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_EMX2OS_5end |
Coexpression cluster: | C1298_ductus_seminal_Fibroblast_kidney_uterus_epididymis_mesenchymal |
Association with transcript: | 100bp_to_ENST00000450314_5end |
EntrezGene: | NA |
HGNC: | 18511 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 3.81e-27 | 23 |
fat cell | 2.65e-13 | 15 |
subcutaneous fat cell | 8.73e-09 | 3 |
synovial cell | 1.66e-08 | 3 |
fibroblast | 3.95e-08 | 76 |
mesenchymal stem cell of adipose | 3.32e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
integument | 4.15e-24 | 46 |
integumental system | 4.15e-24 | 46 |
skin of body | 3.39e-20 | 41 |
male genital duct | 3.46e-18 | 3 |
internal male genitalia | 3.46e-18 | 3 |
adipose tissue | 1.43e-14 | 14 |
duct of male reproductive system | 8.97e-14 | 4 |
internal genitalia | 3.70e-10 | 25 |
surface structure | 1.57e-09 | 99 |
subcutaneous adipose tissue | 8.73e-09 | 3 |
stratified squamous epithelium | 1.66e-08 | 3 |
layer of synovial tissue | 1.66e-08 | 3 |
synovial joint | 1.66e-08 | 3 |
synovial membrane of synovial joint | 1.66e-08 | 3 |
vas deferens | 2.50e-07 | 1 |
spermatic cord | 2.50e-07 | 1 |
seminal vesicle | 3.57e-07 | 1 |
seminal fluid secreting gland | 3.57e-07 | 1 |
epididymis | 4.51e-07 | 1 |
uterus or analog | 7.15e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 2.45e-18 | 5 |
myotonic disease | 2.45e-18 | 5 |
muscle tissue disease | 2.45e-18 | 5 |
myopathy | 2.45e-18 | 5 |
muscular disease | 2.45e-18 | 5 |
myotonic dystrophy | 2.45e-18 | 5 |
cell type benign neoplasm | 3.25e-08 | 3 |
leiomyoma | 3.25e-08 | 3 |
basal cell carcinoma | 8.02e-07 | 1 |