FFCP PHASE1:Hg19::chr5:159846399..159846412,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10569 | |EntrezGene=10569 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16939 | |HGNC=16939 | ||
|TSSclassifier=strong | |||
|UniProt=O95391 | |UniProt=O95391 | ||
|association_with_transcript=0bp_to_ENST00000297151_5end | |association_with_transcript=0bp_to_ENST00000297151_5end | ||
|cluster_id=chr5:159846399..159846412,- | |||
|coexpression_cluster_id=C0 | |coexpression_cluster_id=C0 | ||
|description=CAGE_peak_6_at_SLU7_5end | |description=CAGE_peak_6_at_SLU7_5end | ||
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|ontology_enrichment_celltype=CL:0002057!2.71e-40!42;CL:0000860!1.62e-36!45;CL:0002194!4.66e-36!63;CL:0000576!4.66e-36!63;CL:0000040!4.66e-36!63;CL:0000559!4.66e-36!63;CL:0002009!2.22e-34!65;CL:0002087!7.00e-34!119;CL:0000839!1.03e-33!70;CL:0000557!1.68e-31!71;CL:0000766!3.42e-31!76;CL:0002031!1.28e-30!124;CL:0000738!1.86e-29!140;CL:0000037!5.55e-25!172;CL:0000566!5.55e-25!172;CL:0002032!1.48e-24!165;CL:0000837!1.48e-24!165;CL:0000988!7.82e-23!182;CL:0000763!1.82e-21!112;CL:0000049!1.82e-21!112 | |ontology_enrichment_celltype=CL:0002057!2.71e-40!42;CL:0000860!1.62e-36!45;CL:0002194!4.66e-36!63;CL:0000576!4.66e-36!63;CL:0000040!4.66e-36!63;CL:0000559!4.66e-36!63;CL:0002009!2.22e-34!65;CL:0002087!7.00e-34!119;CL:0000839!1.03e-33!70;CL:0000557!1.68e-31!71;CL:0000766!3.42e-31!76;CL:0002031!1.28e-30!124;CL:0000738!1.86e-29!140;CL:0000037!5.55e-25!172;CL:0000566!5.55e-25!172;CL:0002032!1.48e-24!165;CL:0000837!1.48e-24!165;CL:0000988!7.82e-23!182;CL:0000763!1.82e-21!112;CL:0000049!1.82e-21!112 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.53e-146;33!CL:0002057;1.53e-146;33!CL:0000473;1.93e-101;39!CL:0000234;1.93e-101;39!CL:0000576;2.59e-68;48!CL:0000766;1.40e-35;69!CL:0000763;1.02e-18;100!CL:0002087;7.55e-17;104!CL:0000738;7.11e-11;136 | |ontology_enrichment_celltype_v019=CL:0000860;1.53e-146;33!CL:0002057;1.53e-146;33!CL:0000473;1.93e-101;39!CL:0000234;1.93e-101;39!CL:0000576;2.59e-68;48!CL:0000766;1.40e-35;69!CL:0000763;1.02e-18;100!CL:0002087;7.55e-17;104!CL:0000738;7.11e-11;136 | ||
|ontology_enrichment_celltype_v019_2=CL:0000860,8.35e-126,42;CL:0002057,8.35e-126,42;CL:0000473,1.93e-109,48;CL:0000234,1.93e-109,48;CL:0002194,1.60e-86,59;CL:0000576,1.60e-86,59;CL:0000040,1.60e-86,59;CL:0000559,1.60e-86,59;CL:0002009,1.45e-83,61;CL:0000839,6.11e-77,66;CL:0000557,9.87e-76,67;CL:0000766,3.46e-70,72;CL:0000763,2.91e-45,108;CL:0000049,2.91e-45,108;CL:0002087,3.29e-42,115;CL:0002031,3.04e-40,120;CL:0000738,6.47e-35,136;CL:0002032,1.09e-28,161;CL:0000837,1.09e-28,161;CL:0000037,2.82e-27,168;CL:0000988,1.27e-25,177;CL:0000134,4.76e-10,354;CL:0002320,9.61e-10,361;CL:0000219,1.15e-08,386;CL:0000048,3.74e-08,427;CL:0000723,5.85e-08,433;CL:0000034,1.04e-07,441 | |||
|ontology_enrichment_development_v019=CL:0002057;1.90e-93;42!CL:0000049;1.50e-15;108 | |ontology_enrichment_development_v019=CL:0002057;1.90e-93;42!CL:0000049;1.50e-15;108 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!4.83e-27!80;UBERON:0002390!1.05e-25!102;UBERON:0003061!1.05e-25!102;UBERON:0001474!7.02e-24!86;UBERON:0002193!2.21e-23!112;UBERON:0002405!4.13e-21!115;UBERON:0004765!1.13e-20!101;UBERON:0001434!1.13e-20!101;UBERON:0002619!1.70e-07!22;UBERON:0002204!1.77e-07!167;UBERON:0001950!2.26e-07!20;UBERON:0000956!3.59e-07!25;UBERON:0000203!3.59e-07!25;UBERON:0001893!3.96e-07!34;UBERON:0001869!4.69e-07!32;UBERON:0002020!5.95e-07!34;UBERON:0003528!5.95e-07!34 | |ontology_enrichment_uberon=UBERON:0002371!4.83e-27!80;UBERON:0002390!1.05e-25!102;UBERON:0003061!1.05e-25!102;UBERON:0001474!7.02e-24!86;UBERON:0002193!2.21e-23!112;UBERON:0002405!4.13e-21!115;UBERON:0004765!1.13e-20!101;UBERON:0001434!1.13e-20!101;UBERON:0002619!1.70e-07!22;UBERON:0002204!1.77e-07!167;UBERON:0001950!2.26e-07!20;UBERON:0000956!3.59e-07!25;UBERON:0000203!3.59e-07!25;UBERON:0001893!3.96e-07!34;UBERON:0001869!4.69e-07!32;UBERON:0002020!5.95e-07!34;UBERON:0003528!5.95e-07!34 | ||
|ontology_enrichment_uberon_v019=UBERON:0000996;3.61e-07;1 | |ontology_enrichment_uberon_v019=UBERON:0000996;3.61e-07;1 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.86e-66,76;UBERON:0001474,4.24e-61,82;UBERON:0004765,2.89e-55,90;UBERON:0002405,2.48e-53,93;UBERON:0002390,2.27e-50,98;UBERON:0003061,2.27e-50,98;UBERON:0001434,2.87e-49,100;UBERON:0002193,2.91e-45,108;UBERON:0002204,1.80e-27,167;UBERON:0003081,1.18e-21,203;UBERON:0000926,4.16e-13,315;UBERON:0004120,4.16e-13,315;UBERON:0006603,4.16e-13,315;UBERON:0002384,2.51e-09,371;UBERON:0000996,3.84e-07,1 | |||
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| ||
|short_description=p6@SLU7 | |short_description=p6@SLU7 | ||
}} | }} |
Latest revision as of 16:18, 16 September 2015
Short description: | p6@SLU7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_SLU7_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | 0bp_to_ENST00000297151_5end |
EntrezGene: | SLU7 |
HGNC: | 16939 |
UniProt: | O95391 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 8.35e-126 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.35e-126 | 42 |
defensive cell | 1.93e-109 | 48 |
phagocyte | 1.93e-109 | 48 |
monopoietic cell | 1.60e-86 | 59 |
monocyte | 1.60e-86 | 59 |
monoblast | 1.60e-86 | 59 |
promonocyte | 1.60e-86 | 59 |
macrophage dendritic cell progenitor | 1.45e-83 | 61 |
myeloid lineage restricted progenitor cell | 6.11e-77 | 66 |
granulocyte monocyte progenitor cell | 9.87e-76 | 67 |
myeloid leukocyte | 3.46e-70 | 72 |
myeloid cell | 2.91e-45 | 108 |
common myeloid progenitor | 2.91e-45 | 108 |
nongranular leukocyte | 3.29e-42 | 115 |
hematopoietic lineage restricted progenitor cell | 3.04e-40 | 120 |
leukocyte | 6.47e-35 | 136 |
hematopoietic oligopotent progenitor cell | 1.09e-28 | 161 |
hematopoietic multipotent progenitor cell | 1.09e-28 | 161 |
hematopoietic stem cell | 2.82e-27 | 168 |
hematopoietic cell | 1.27e-25 | 177 |
mesenchymal cell | 4.76e-10 | 354 |
connective tissue cell | 9.61e-10 | 361 |
motile cell | 1.15e-08 | 386 |
multi fate stem cell | 3.74e-08 | 427 |
somatic stem cell | 5.85e-08 | 433 |
stem cell | 1.04e-07 | 441 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.86e-66 | 76 |
bone element | 4.24e-61 | 82 |
skeletal element | 2.89e-55 | 90 |
immune system | 2.48e-53 | 93 |
hematopoietic system | 2.27e-50 | 98 |
blood island | 2.27e-50 | 98 |
skeletal system | 2.87e-49 | 100 |
hemolymphoid system | 2.91e-45 | 108 |
musculoskeletal system | 1.80e-27 | 167 |
lateral plate mesoderm | 1.18e-21 | 203 |
mesoderm | 4.16e-13 | 315 |
mesoderm-derived structure | 4.16e-13 | 315 |
presumptive mesoderm | 4.16e-13 | 315 |
connective tissue | 2.51e-09 | 371 |
vagina | 3.84e-07 | 1 |