FFCP PHASE1:Hg19::chr12:11802957..11802964,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2120 | |EntrezGene=2120 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3495 | |HGNC=3495 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=12bp_to_ENST00000544715_5end | |association_with_transcript=12bp_to_ENST00000544715_5end | ||
|cluster_id=chr12:11802957..11802964,+ | |||
|coexpression_cluster_id=C2187 | |coexpression_cluster_id=C2187 | ||
|description=CAGE_peak_8_at_ETV6_5end | |description=CAGE_peak_8_at_ETV6_5end | ||
|id=chr12:11802957..11802964,+ | |id=chr12:11802957..11802964,+ | ||
|ontology_enrichment_celltype=CL:0000860;5.38e-52;33!CL:0002057;5.38e-52;33!CL:0000473;7.74e-38;39!CL:0000234;7.74e-38;39!CL:0000576;3.07e-26;48!CL:0000766;1.05e-21;69!CL:0000763;8.38e-11;100!CL:0000738;2.37e-08;136!CL:0000451;6.89e-08;10!CL:0000840;4.60e-07;5!CL:0000990;5.73e-07;8 | |ontology_enrichment_celltype=CL:0002057!1.04e-22!42;CL:0000860!1.71e-20!45;CL:0000839!2.32e-20!70;CL:0000557!3.26e-20!71;CL:0000766!2.41e-19!76;CL:0000763!2.71e-19!112;CL:0000049!2.71e-19!112;CL:0002194!1.27e-18!63;CL:0000576!1.27e-18!63;CL:0000040!1.27e-18!63;CL:0000559!1.27e-18!63;CL:0002009!1.63e-18!65;CL:0000988!4.01e-15!182;CL:0000037!2.11e-12!172;CL:0000566!2.11e-12!172;CL:0002032!1.95e-11!165;CL:0000837!1.95e-11!165;CL:0000738!2.79e-11!140;CL:0002031!6.89e-10!124;CL:0002087!3.44e-09!119 | ||
| | |ontology_enrichment_celltype_v019=CL:0000860;5.38e-52;33!CL:0002057;5.38e-52;33!CL:0000473;7.74e-38;39!CL:0000234;7.74e-38;39!CL:0000576;3.07e-26;48!CL:0000766;1.05e-21;69!CL:0000763;8.38e-11;100!CL:0000738;2.37e-08;136!CL:0000451;6.89e-08;10!CL:0000840;4.60e-07;5!CL:0000990;5.73e-07;8 | ||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.89e-50,42;CL:0002057,1.89e-50,42;CL:0000766,1.03e-48,72;CL:0000557,1.09e-47,67;CL:0000473,2.19e-46,48;CL:0000234,2.19e-46,48;CL:0000839,7.94e-46,66;CL:0002009,1.61e-44,61;CL:0002194,1.57e-43,59;CL:0000576,1.57e-43,59;CL:0000040,1.57e-43,59;CL:0000559,1.57e-43,59;CL:0000763,1.90e-38,108;CL:0000049,1.90e-38,108;CL:0000988,4.08e-29,177;CL:0000738,1.66e-26,136;CL:0000037,2.26e-24,168;CL:0002031,3.12e-22,120;CL:0002032,5.55e-22,161;CL:0000837,5.55e-22,161;CL:0002087,2.97e-19,115;CL:0000134,9.88e-09,354;CL:0002320,2.51e-08,361;CL:0000451,2.67e-08,10;CL:0000840,2.19e-07,5;CL:0001029,2.19e-07,5;CL:0000990,2.56e-07,8;CL:0000034,4.48e-07,441;CL:0000219,6.46e-07,386 | |||
|ontology_enrichment_development_v019=CL:0002057;1.58e-36;42!CL:0000049;1.91e-11;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!7.17e-19!102;UBERON:0003061!7.17e-19!102;UBERON:0002371!3.30e-18!80;UBERON:0001474!8.84e-18!86;UBERON:0002193!3.31e-17!112;UBERON:0004765!8.61e-14!101;UBERON:0001434!8.61e-14!101;UBERON:0002405!8.93e-13!115;UBERON:0003081!1.87e-12!216;UBERON:0002204!9.02e-07!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,8.15e-46,76;UBERON:0001474,5.82e-44,82;UBERON:0002390,1.64e-43,98;UBERON:0003061,1.64e-43,98;UBERON:0004765,4.17e-39,90;UBERON:0002193,2.07e-38,108;UBERON:0002405,1.63e-37,93;UBERON:0001434,3.98e-34,100;UBERON:0003081,1.39e-27,203;UBERON:0002204,1.58e-19,167;UBERON:0000926,1.46e-14,315;UBERON:0004120,1.46e-14,315;UBERON:0006603,1.46e-14,315;UBERON:0002384,2.56e-08,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0.730310090387373,1.46379839637152,0.246242116153576,0,0.313454721478088,0.286235987131057,0.136874425072884,0.87879847716362,0.916960868975415,0.656804715599566,0.787107813136792,1.18009283054671,0,1.08371286321253,0,0,0,0,0.426507697462265,1.76160263600908,1.10799081706375,3.40925560699241,0.651032612147555,0.671746422719773,0,0.515151135268373,2.4717700592526,3.02300754951048,1.4555043671269,1.39457422143411,1.6446715520873,1.23882548358041,4.60307827715441,4.35473201099471,2.83778675866302,2.41321976515633,1.29096936716765,2.70852973188684,1.88242339542605,1.91034305040492,3.14612878223118,3.06083892370903,2.88836124368484,2.55734850319616,3.62836430205388,2.99195486432448,2.98357325372886,0.870627715885752,2.26954089876456,0.622822248995575,3.01498398308092,2.60741459210101,5.42972111762792,0.605399502633369,3.31449872388808,5.06339819905415,0.633765858935825,0.425208599930087,0.838634582033504,0.44931452458598,0.901061357049038,0.48217676009124,0,0,0,0,0,0,0,0.400395987036012,0,0,0,0,0.587237189370939,0,2.64342657158052,2.80254281490768,0.526768169550154,0,0.393010762749165,0,0,0,0,0,0.222820913770347,0,0.443067789167242,0.270803863765016,0,0,0,0,0.289803085735052,0,0,0,0.226618685395132,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0.267440195783507,0,0,0,0.12786256184353,0,0,0.289693037921647,0.795285947051099,0.486634870302636,0.189069634328136,0,0.43917392846563,0.458426764241994,0,0,1.9472843619281,1.74129737299267,1.59549552622638,0,1.71598473234038,0,0.198762407366705,0,0,0.56530794192401,0.419499436209906,0.550236083880135,0.417989933073621,0.516833518338658,0,0.33472061276467,0.805658634218294,0,0.488124115096339,0,0,0.267899184852239,0,0,3.06633274931766,0,0,0,0,0,0.496971951695318,0.506522046658319,0.264818361626438,0,0.354668382198357,0,0,0.24666754841716,0.311211035399766,0,0,0.454072282934794,0,0,0,0,0,0,0,0.140450806702248,0,0,0.103325781175765,0,0.494533858557114,0,0,0,0,0,0.438977620880838,0.30648779579902,0.45071417671979,0,0.358779271377724,0.640672166455702,0.211931901159562,0,0.206105058476878,0,0,0,0.487185025805993,0.252433774244115,0.460249493211497,0,0.710019185033229,0.10075209822764,0.169560592310488,0.193260853163297,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0.343135620597051,0,0,0,0,0,0,0,0.34779121492523,0.469634776943287,0.577465791044295,0,0,0,0,0,0.234004265139238,0.445893486866185,0,0.16798212819886,0.141775097242386,0,0,0,4.92663237895944,0.968532774145487,1.03664057770386,1.15295962733569,0.25248486685276,0,0,0,0,0,0.300343057843917,0,0.112131084345361,0,0.66004457238855,1.42198887333556,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.199945982364114,2.43247561282381,0,0,0.479249710983165,1.14861935834114,0,0,0,0,0.112085143993527,0.394061520403854,0,0.256686072559497,0.76228387266739,0,0,0,0,0,0,1.24324654030811,0,0,0,0.623912584592421,0.535286966391485,0.788512075169673,0.468565659970853,0.300946099727719,0,0,0.664225598535437,0.184369168541703,0,0.587403472388222,0.686286847621712,0.206768026122887,1.07857100409308,0.640365346820666,0,0,0,0.248107807818777,0.306923946576125,0,0,0,0.160853921143607,0,0.308419387605311,0,0,0,0,0,0.40101294060657,0,0,0,0,0,0.0770153371044148,0,1.46139224653261,0.211103257785751,0,0,0.431831832204279,0,0.270946437543853,1.00337954770971,0,0,0.223874754722178,0.219259876645935,0,0,0.328014645699706,0.325378394664303,0.309123034943167,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0.0852266274161009,0.178064071293475,0.330569830721956,0.192190067365106,0.255225424989168,0.10115778085555,0,0.31481234683064,0.6970372701606,0.616067160352178,0,0,0.37064843820784,0.143124886741991,0,0,0,0,0,0,1.56989728039846,0.179872457583315,0,0.117812402345686,0.202182481573316,0,0,0.48763373908959,0,0,0,0.707027159768564,0,0,0,0.438450885253763,0,0,0.202910376962704,0,1.12678241012897,0,0.196498082026242,0.7133421029625,0,0,0,0,0.349934720244983,0.0962221127255121,0.670302275535787,0,0.188287601553558,0,0,0,0,0,0,0.569647187174163,0,0.411362273086194,0,0,0,0,0,0,0.185803175125719,0.144269212976445,0,0,0,0.766021480529467,0.635020748171649,0,0.561594356226918,0,0.156679895773023,2.50634477090067,0.169291777801603,0.321176150207399,0.201799707191048,0.425846237690326,0.687010689511529,0,0.447352215784832,0.166849141711909,0,0,0,0.540911356951966,0.99921590399346,1.4098700508785,0.18714054040822,0.586032717087576,0,0.222886768554957,0.284136146806413,0,0.296964680832639,0,0,0.140669416410513,0.445234820091624,0.329607748453519,0.211125408127993,0.796991953004279,0,0,0.818149460017238,0.123084805461069,0.622079175323615,0.0898683511473268,0,0,0.789147245095469,0,1.11136990144637,0.969332746095218,0.0927680981618513,0,0.520855522170466,0,0,0.1137934482855,0.254253650292766,0,0,0,0,0,0.241192877250816,0,0,0,0.438770794307945,0,0.139423744278603,0.538651809526579,0.113942055847001,0,0.179515288819544,0,0,0.183195186803725,0,0,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| ||
|short_description=p8@ETV6 | |short_description=p8@ETV6 | ||
}} | }} |
Latest revision as of 16:40, 16 September 2015
Short description: | p8@ETV6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_ETV6_5end |
Coexpression cluster: | C2187_granulocyte_CD14_migratory_Eosinophils_Neutrophils_CD34_acute |
Association with transcript: | 12bp_to_ENST00000544715_5end |
EntrezGene: | ETV6 |
HGNC: | 3495 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.89e-50 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.89e-50 | 42 |
myeloid leukocyte | 1.03e-48 | 72 |
granulocyte monocyte progenitor cell | 1.09e-47 | 67 |
defensive cell | 2.19e-46 | 48 |
phagocyte | 2.19e-46 | 48 |
myeloid lineage restricted progenitor cell | 7.94e-46 | 66 |
macrophage dendritic cell progenitor | 1.61e-44 | 61 |
monopoietic cell | 1.57e-43 | 59 |
monocyte | 1.57e-43 | 59 |
monoblast | 1.57e-43 | 59 |
promonocyte | 1.57e-43 | 59 |
myeloid cell | 1.90e-38 | 108 |
common myeloid progenitor | 1.90e-38 | 108 |
hematopoietic cell | 4.08e-29 | 177 |
leukocyte | 1.66e-26 | 136 |
hematopoietic stem cell | 2.26e-24 | 168 |
hematopoietic lineage restricted progenitor cell | 3.12e-22 | 120 |
hematopoietic oligopotent progenitor cell | 5.55e-22 | 161 |
hematopoietic multipotent progenitor cell | 5.55e-22 | 161 |
nongranular leukocyte | 2.97e-19 | 115 |
mesenchymal cell | 9.88e-09 | 354 |
connective tissue cell | 2.51e-08 | 361 |
dendritic cell | 2.67e-08 | 10 |
immature conventional dendritic cell | 2.19e-07 | 5 |
common dendritic progenitor | 2.19e-07 | 5 |
conventional dendritic cell | 2.56e-07 | 8 |
stem cell | 4.48e-07 | 441 |
motile cell | 6.46e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 8.15e-46 | 76 |
bone element | 5.82e-44 | 82 |
hematopoietic system | 1.64e-43 | 98 |
blood island | 1.64e-43 | 98 |
skeletal element | 4.17e-39 | 90 |
hemolymphoid system | 2.07e-38 | 108 |
immune system | 1.63e-37 | 93 |
skeletal system | 3.98e-34 | 100 |
lateral plate mesoderm | 1.39e-27 | 203 |
musculoskeletal system | 1.58e-19 | 167 |
mesoderm | 1.46e-14 | 315 |
mesoderm-derived structure | 1.46e-14 | 315 |
presumptive mesoderm | 1.46e-14 | 315 |
connective tissue | 2.56e-08 | 371 |