FFCP PHASE1:Hg19::chr8:135725249..135725292,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57623 | |EntrezGene=57623 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19899 | |HGNC=19899 | ||
|TSSclassifier=strong | |||
|UniProt=Q9P243,E5RH37,E5RJL9,B7Z6H1,B7ZL15,E9PER3 | |UniProt=Q9P243,E5RH37,E5RJL9,B7Z6H1,B7ZL15,E9PER3 | ||
|association_with_transcript=0bp_to_ENST00000377838,ENST00000523243,ENST00000523924,NM_001174157,NM_020863,uc003yup.2,uc003yuq.2,uc010mei.2,uc010mej.2_5end | |association_with_transcript=0bp_to_ENST00000377838,ENST00000523243,ENST00000523924,NM_001174157,NM_020863,uc003yup.2,uc003yuq.2,uc010mei.2,uc010mej.2_5end | ||
|cluster_id=chr8:135725249..135725292,- | |||
|description=CAGE_peak_1_at_ZFAT_5end | |description=CAGE_peak_1_at_ZFAT_5end | ||
|id=chr8:135725249..135725292,- | |id=chr8:135725249..135725292,- | ||
|ontology_enrichment_celltype=CL:0000860!1.82e-11!45;CL:0002057!1.78e-10!42;CL:0000766!1.07e-07!76;CL:0000738!2.33e-07!140;CL:0002087!3.13e-07!119;CL:0002194!3.62e-07!63;CL:0000576!3.62e-07!63;CL:0000040!3.62e-07!63;CL:0000559!3.62e-07!63;CL:0002009!9.25e-07!65 | |ontology_enrichment_celltype=CL:0000860!1.82e-11!45;CL:0002057!1.78e-10!42;CL:0000766!1.07e-07!76;CL:0000738!2.33e-07!140;CL:0002087!3.13e-07!119;CL:0002194!3.62e-07!63;CL:0000576!3.62e-07!63;CL:0000040!3.62e-07!63;CL:0000559!3.62e-07!63;CL:0002009!9.25e-07!65 | ||
|ontology_enrichment_celltype_v019=CL:0000860;3.66e-12;33!CL:0002057;3.66e-12;33!CL:0000473;1.26e-08;39!CL:0000234;1.26e-08;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.78e-10,42;CL:0002057,1.78e-10,42;CL:0000473,6.82e-09,48;CL:0000234,6.82e-09,48;CL:0000766,2.36e-07,72;CL:0000738,5.06e-07,136;CL:0002087,6.83e-07,115;CL:0002194,7.85e-07,59;CL:0000576,7.85e-07,59;CL:0000040,7.85e-07,59;CL:0000559,7.85e-07,59 | |||
|ontology_enrichment_development_v019=CL:0002057;6.19e-08;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.16e-12!115;UBERON:0001049!2.91e-09!57;UBERON:0005068!2.91e-09!57;UBERON:0006241!2.91e-09!57;UBERON:0007135!2.91e-09!57;UBERON:0002390!3.44e-09!102;UBERON:0003061!3.44e-09!102;UBERON:0002193!4.19e-09!112;UBERON:0003080!3.27e-08!42;UBERON:0002616!3.71e-08!59;UBERON:0002780!8.72e-08!41;UBERON:0001890!8.72e-08!41;UBERON:0006240!8.72e-08!41;UBERON:0002020!7.55e-07!34;UBERON:0003528!7.55e-07!34 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,7.85e-12,114;UBERON:0001049,7.49e-09,56;UBERON:0005068,7.49e-09,56;UBERON:0006241,7.49e-09,56;UBERON:0007135,7.49e-09,56;UBERON:0000073,7.79e-09,53;UBERON:0002616,7.79e-09,53;UBERON:0002390,7.85e-09,98;UBERON:0003061,7.85e-09,98;UBERON:0002193,9.59e-09,108;UBERON:0002780,8.72e-08,41;UBERON:0001890,8.72e-08,41;UBERON:0003080,8.72e-08,41;UBERON:0006240,8.72e-08,41;UBERON:0003528,7.55e-07,34;UBERON:0002020,7.55e-07,34;UBERON:0003075,8.30e-07,82;UBERON:0007284,8.30e-07,82;UBERON:0002346,9.28e-07,86 | |||
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| ||
|short_description=p1@ZFAT | |short_description=p1@ZFAT | ||
}} | }} |
Latest revision as of 17:57, 16 September 2015
Short description: | p1@ZFAT |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ZFAT_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000377838, ENST00000523243, ENST00000523924, NM_001174157, NM_020863, uc003yup.2, uc003yuq.2, uc010mei.2, uc010mej.2_5end |
EntrezGene: | ZFAT |
HGNC: | 19899 |
UniProt: | Q9P243E5RH37E5RJL9B7Z6H1B7ZL15E9PER3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.78e-10 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.78e-10 | 42 |
defensive cell | 6.82e-09 | 48 |
phagocyte | 6.82e-09 | 48 |
myeloid leukocyte | 2.36e-07 | 72 |
leukocyte | 5.06e-07 | 136 |
nongranular leukocyte | 6.83e-07 | 115 |
monopoietic cell | 7.85e-07 | 59 |
monocyte | 7.85e-07 | 59 |
monoblast | 7.85e-07 | 59 |
promonocyte | 7.85e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
adult organism | 7.85e-12 | 114 |
neural tube | 7.49e-09 | 56 |
neural rod | 7.49e-09 | 56 |
future spinal cord | 7.49e-09 | 56 |
neural keel | 7.49e-09 | 56 |
regional part of nervous system | 7.79e-09 | 53 |
regional part of brain | 7.79e-09 | 53 |
hematopoietic system | 7.85e-09 | 98 |
blood island | 7.85e-09 | 98 |
hemolymphoid system | 9.59e-09 | 108 |
regional part of forebrain | 8.72e-08 | 41 |
forebrain | 8.72e-08 | 41 |
anterior neural tube | 8.72e-08 | 41 |
future forebrain | 8.72e-08 | 41 |
brain grey matter | 7.55e-07 | 34 |
gray matter | 7.55e-07 | 34 |
neural plate | 8.30e-07 | 82 |
presumptive neural plate | 8.30e-07 | 82 |
neurectoderm | 9.28e-07 | 86 |