FFCP PHASE1:Hg19::chr1:242613187..242613195,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=200150 | |EntrezGene=200150 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26879 | |HGNC=26879 | ||
|TSSclassifier=strong | |||
|UniProt=Q8N7P1 | |UniProt=Q8N7P1 | ||
|association_with_transcript=-403bp_to_ENST00000427495,NM_001195811,NM_001195812_5end | |association_with_transcript=-403bp_to_ENST00000427495,NM_001195811,NM_001195812_5end | ||
|cluster_id=chr1:242613187..242613195,- | |||
|coexpression_cluster_id=C3955 | |||
|description=CAGE_peak_13_at_PLD5_5end | |description=CAGE_peak_13_at_PLD5_5end | ||
|id=chr1:242613187..242613195,- | |id=chr1:242613187..242613195,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0003056;2.62e-23;3!UBERON:0006601;1.08e-07;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.59e-28!57;UBERON:0005068!1.59e-28!57;UBERON:0006241!1.59e-28!57;UBERON:0007135!1.59e-28!57;UBERON:0002616!1.63e-27!59;UBERON:0003075!6.00e-25!86;UBERON:0007284!6.00e-25!86;UBERON:0005743!1.22e-24!86;UBERON:0002346!9.26e-24!90;UBERON:0000955!5.71e-23!69;UBERON:0006238!5.71e-23!69;UBERON:0000007!1.49e-22!2;UBERON:0001017!2.38e-22!82;UBERON:0000073!3.69e-22!94;UBERON:0001016!3.69e-22!94;UBERON:0007023!4.39e-21!115;UBERON:0002780!8.12e-19!41;UBERON:0001890!8.12e-19!41;UBERON:0006240!8.12e-19!41;UBERON:0003080!2.36e-18!42;UBERON:0000033!1.04e-16!123;UBERON:0000153!7.64e-16!129;UBERON:0007811!7.64e-16!129;UBERON:0003056!2.03e-15!61;UBERON:0001896!2.10e-15!3;UBERON:0005290!2.10e-15!3;UBERON:0010096!2.10e-15!3;UBERON:0004733!1.46e-14!12;UBERON:0002028!1.46e-14!12;UBERON:0007277!1.46e-14!12;UBERON:0001893!1.05e-13!34;UBERON:0004732!1.84e-13!13;UBERON:0003112!7.76e-12!1;UBERON:0000032!7.76e-12!1;UBERON:0005253!7.76e-12!1;UBERON:0003128!7.76e-12!1;UBERON:0002241!7.76e-12!1;UBERON:0001703!7.76e-12!1;UBERON:0004761!7.76e-12!1;UBERON:0009617!7.76e-12!1;UBERON:0003296!9.13e-12!4;UBERON:0010133!9.13e-12!4;UBERON:0003076!1.07e-11!15;UBERON:0003057!1.07e-11!15;UBERON:0007190!1.19e-11!1;UBERON:0002336!1.32e-11!1;UBERON:0001018!1.32e-11!1;UBERON:0002473!1.32e-11!1;UBERON:0005340!1.32e-11!1;UBERON:0002316!1.32e-11!1;UBERON:0003544!1.32e-11!1;UBERON:0001020!1.32e-11!1;UBERON:0005970!1.32e-11!1;UBERON:0002437!1.32e-11!1;UBERON:0004121!1.54e-11!169;UBERON:0002022!1.81e-11!1;UBERON:0000924!3.16e-11!173;UBERON:0006601!3.16e-11!173;UBERON:0002619!4.44e-11!22;UBERON:0001869!8.00e-11!32;UBERON:0002791!1.74e-10!33;UBERON:0000956!8.63e-10!25;UBERON:0000203!8.63e-10!25;UBERON:0002037!4.82e-08!6;UBERON:0006215!4.82e-08!6;UBERON:0001950!5.05e-08!20;UBERON:0000200!7.85e-08!6;UBERON:0002020!3.05e-07!34;UBERON:0003528!3.05e-07!34;UBERON:0000025!4.01e-07!194;UBERON:0001894!4.33e-07!7;UBERON:0006222!4.33e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0000007;5.96e-34;2!UBERON:0001896;3.66e-23;3!UBERON:0005290;3.66e-23;3!UBERON:0003296;9.45e-18;4!UBERON:0010133;9.45e-18;4!UBERON:0000966;1.40e-14;5!UBERON:0005388;1.40e-14;5!UBERON:0001802;1.40e-14;5!UBERON:0002298;2.59e-12;6!UBERON:0001894;9.43e-11;7!UBERON:0004733;8.14e-07;12!UBERON:0002028;8.14e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000007,5.04e-34,2;UBERON:0001896,4.09e-23,3;UBERON:0005290,4.09e-23,3;UBERON:0010096,4.09e-23,3;UBERON:0003296,8.69e-18,4;UBERON:0010133,8.69e-18,4;UBERON:0000966,2.19e-12,6;UBERON:0005388,2.19e-12,6;UBERON:0001802,2.19e-12,6;UBERON:0002298,2.74e-12,6;UBERON:0001894,8.99e-11,7;UBERON:0006222,8.99e-11,7;UBERON:0003075,3.31e-08,82;UBERON:0007284,3.31e-08,82;UBERON:0002346,7.10e-08,86;UBERON:0004733,8.38e-07,12;UBERON:0002028,8.38e-07,12;UBERON:0007277,8.38e-07,12 | |||
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|short_description=p13@PLD5 | |short_description=p13@PLD5 | ||
}} | }} |
Latest revision as of 18:55, 16 September 2015
Short description: | p13@PLD5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_PLD5_5end |
Coexpression cluster: | C3955_cerebellum_retina_small_medulla_pituitary_Retinal_eye |
Association with transcript: | -403bp_to_ENST00000427495, NM_001195811, NM_001195812_5end |
EntrezGene: | PLD5 |
HGNC: | 26879 |
UniProt: | Q8N7P1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pituitary gland | 5.04e-34 | 2 |
medulla oblongata | 4.09e-23 | 3 |
myelencephalon | 4.09e-23 | 3 |
future myelencephalon | 4.09e-23 | 3 |
gland of diencephalon | 8.69e-18 | 4 |
neuroendocrine gland | 8.69e-18 | 4 |
retina | 2.19e-12 | 6 |
photoreceptor array | 2.19e-12 | 6 |
posterior segment of eyeball | 2.19e-12 | 6 |
brainstem | 2.74e-12 | 6 |
diencephalon | 8.99e-11 | 7 |
future diencephalon | 8.99e-11 | 7 |
neural plate | 3.31e-08 | 82 |
presumptive neural plate | 3.31e-08 | 82 |
neurectoderm | 7.10e-08 | 86 |
segmental subdivision of hindbrain | 8.38e-07 | 12 |
hindbrain | 8.38e-07 | 12 |
presumptive hindbrain | 8.38e-07 | 12 |