FFCP PHASE1:Hg19::chr1:146644122..146644176,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5565 | |EntrezGene=5565 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9379 | |HGNC=9379 | ||
|TSSclassifier=strong | |||
|UniProt=O43741 | |UniProt=O43741 | ||
|association_with_transcript=0bp_to_ENST00000254101,ENST00000474939,NM_005399,uc001epe.2,uc009wjf.1,uc010ozm.1,uc010ozn.1_5end | |association_with_transcript=0bp_to_ENST00000254101,ENST00000474939,NM_005399,uc001epe.2,uc009wjf.1,uc010ozm.1,uc010ozn.1_5end | ||
|cluster_id=chr1:146644122..146644176,- | |||
|description=CAGE_peak_3_at_PRKAB2_5end | |description=CAGE_peak_3_at_PRKAB2_5end | ||
|id=chr1:146644122..146644176,- | |id=chr1:146644122..146644176,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3095;5.48e-07;22!DOID:2994;5.48e-07;22 | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.35e-08!82;UBERON:0005743!2.08e-07!86;UBERON:0002616!2.58e-07!59;UBERON:0000073!4.24e-07!94;UBERON:0001016!4.24e-07!94;UBERON:0000955!4.30e-07!69;UBERON:0006238!4.30e-07!69;UBERON:0001049!5.21e-07!57;UBERON:0005068!5.21e-07!57;UBERON:0006241!5.21e-07!57;UBERON:0007135!5.21e-07!57 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,9.90e-09,81;UBERON:0001016,2.31e-08,89;UBERON:0000073,2.17e-07,53;UBERON:0002616,2.17e-07,53;UBERON:0011216,2.73e-07,223;UBERON:0001049,3.13e-07,56;UBERON:0005068,3.13e-07,56;UBERON:0006241,3.13e-07,56;UBERON:0007135,3.13e-07,56;UBERON:0000955,3.24e-07,68;UBERON:0006238,3.24e-07,68 | |||
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| ||
|short_description=p3@PRKAB2 | |short_description=p3@PRKAB2 | ||
}} | }} |
Latest revision as of 19:11, 16 September 2015
Short description: | p3@PRKAB2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_PRKAB2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000254101, ENST00000474939, NM_005399, uc001epe.2, uc009wjf.1, uc010ozm.1, uc010ozn.1_5end |
EntrezGene: | PRKAB2 |
HGNC: | 9379 |
UniProt: | O43741 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
central nervous system | 9.90e-09 | 81 |
nervous system | 2.31e-08 | 89 |
regional part of nervous system | 2.17e-07 | 53 |
regional part of brain | 2.17e-07 | 53 |
organ system subdivision | 2.73e-07 | 223 |
neural tube | 3.13e-07 | 56 |
neural rod | 3.13e-07 | 56 |
future spinal cord | 3.13e-07 | 56 |
neural keel | 3.13e-07 | 56 |
brain | 3.24e-07 | 68 |
future brain | 3.24e-07 | 68 |