FFCP PHASE1:Hg19::chr7:141695594..141695597,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8972 | |EntrezGene=8972 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7043 | |HGNC=7043 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-40bp_to_ENST00000549489_5end | |association_with_transcript=-40bp_to_ENST00000549489_5end | ||
|cluster_id=chr7:141695594..141695597,+ | |||
|coexpression_cluster_id=C25 | |||
|description=CAGE_peak_4_at_MGAM_5end | |description=CAGE_peak_4_at_MGAM_5end | ||
|id=chr7:141695594..141695597,+ | |id=chr7:141695594..141695597,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0007297;5.56e-26;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0006947!1.22e-27!3;UBERON:0004054!1.22e-27!3;UBERON:0001301!1.88e-21!1;UBERON:0001000!2.82e-21!1;UBERON:0005352!2.82e-21!1;UBERON:0005904!5.17e-21!4;UBERON:0003135!5.12e-17!11;UBERON:0003101!7.70e-15!22;UBERON:0000079!7.70e-15!22;UBERON:0007023!2.99e-08!115;UBERON:0006554!1.57e-07!44;UBERON:0001008!2.28e-07!45;UBERON:0002113!3.16e-07!27;UBERON:0003918!3.16e-07!27;UBERON:0005095!3.16e-07!27;UBERON:0007687!3.16e-07!27 | |ontology_enrichment_uberon=UBERON:0006947!1.22e-27!3;UBERON:0004054!1.22e-27!3;UBERON:0001301!1.88e-21!1;UBERON:0001000!2.82e-21!1;UBERON:0005352!2.82e-21!1;UBERON:0005904!5.17e-21!4;UBERON:0003135!5.12e-17!11;UBERON:0003101!7.70e-15!22;UBERON:0000079!7.70e-15!22;UBERON:0007023!2.99e-08!115;UBERON:0006554!1.57e-07!44;UBERON:0001008!2.28e-07!45;UBERON:0002113!3.16e-07!27;UBERON:0003918!3.16e-07!27;UBERON:0005095!3.16e-07!27;UBERON:0007687!3.16e-07!27 | ||
|ontology_enrichment_uberon_v019=UBERON:0006947;4.68e-66;3!UBERON:0004054;4.68e-66;3!UBERON:0001301;2.42e-50;1!UBERON:0001000;6.58e-50;1!UBERON:0005352;6.58e-50;1!UBERON:0005904;6.60e-50;4!UBERON:0000058;9.44e-21;10!UBERON:0003135;5.63e-19;11!UBERON:0000160;4.31e-12;17!UBERON:0002108;2.66e-11;4!UBERON:0004175;1.77e-10;21!UBERON:0003101;4.74e-10;22!UBERON:0000079;4.74e-10;22!UBERON:0005409;1.07e-09;22!UBERON:0001155;8.37e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006947,4.68e-66,3;UBERON:0004054,4.68e-66,3;UBERON:0001301,2.42e-50,1;UBERON:0001000,6.58e-50,1;UBERON:0005352,6.58e-50,1;UBERON:0005904,6.60e-50,4;UBERON:0003135,5.63e-19,11;UBERON:0000160,4.31e-12,17;UBERON:0000058,1.81e-11,19;UBERON:0002108,2.66e-11,4;UBERON:0003101,4.74e-10,22;UBERON:0000079,4.74e-10,22;UBERON:0004175,5.71e-09,25;UBERON:0005409,1.07e-08,25;UBERON:0007023,8.86e-08,114;UBERON:0005103,1.59e-07,8;UBERON:0000083,1.59e-07,8;UBERON:0009201,1.59e-07,8;UBERON:0006553,1.59e-07,8;UBERON:0003074,1.59e-07,8;UBERON:0003060,1.59e-07,8;UBERON:0000080,7.91e-07,9;UBERON:0002120,7.91e-07,9;UBERON:0004875,7.91e-07,9;UBERON:0005721,7.91e-07,9;UBERON:0005754,7.91e-07,9;UBERON:0007297,7.91e-07,9;UBERON:0001155,8.37e-07,9 | |||
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|short_description=p4@MGAM | |short_description=p4@MGAM | ||
}} | }} |
Latest revision as of 19:15, 16 September 2015
Short description: | p4@MGAM |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_MGAM_5end |
Coexpression cluster: | C25_small_colon_temporal_duodenum_liver_Hepatocyte_gall |
Association with transcript: | -40bp_to_ENST00000549489_5end |
EntrezGene: | MGAM |
HGNC: | 7043 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
male genital duct | 4.68e-66 | 3 |
internal male genitalia | 4.68e-66 | 3 |
epididymis | 2.42e-50 | 1 |
vas deferens | 6.58e-50 | 1 |
spermatic cord | 6.58e-50 | 1 |
duct of male reproductive system | 6.60e-50 | 4 |
male reproductive organ | 5.63e-19 | 11 |
intestine | 4.31e-12 | 17 |
duct | 1.81e-11 | 19 |
small intestine | 2.66e-11 | 4 |
male organism | 4.74e-10 | 22 |
male reproductive system | 4.74e-10 | 22 |
internal genitalia | 5.71e-09 | 25 |
gastrointestinal system | 1.07e-08 | 25 |
adult organism | 8.86e-08 | 114 |
mesonephric epithelium | 1.59e-07 | 8 |
mesonephric tubule | 1.59e-07 | 8 |
nephric duct | 1.59e-07 | 8 |
renal duct | 1.59e-07 | 8 |
mesonephric duct | 1.59e-07 | 8 |
pronephric duct | 1.59e-07 | 8 |
mesonephros | 7.91e-07 | 9 |
pronephros | 7.91e-07 | 9 |
nephrogenic cord | 7.91e-07 | 9 |
pronephric mesoderm | 7.91e-07 | 9 |
rostral part of nephrogenic cord | 7.91e-07 | 9 |
presumptive pronephric mesoderm | 7.91e-07 | 9 |
colon | 8.37e-07 | 9 |