FFCP PHASE1:Hg19::chr17:62208169..62208181,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2081 | |EntrezGene=2081 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=3449 | |HGNC=3449 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_AK055561_5end | |association_with_transcript=0bp_to_AK055561_5end | ||
|cluster_id=chr17:62208169..62208181,- | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_5_at_ERN1_5end | |description=CAGE_peak_5_at_ERN1_5end | ||
|id=chr17:62208169..62208181,- | |id=chr17:62208169..62208181,- | ||
|ontology_enrichment_celltype=CL:0002057!2.30e-48!42;CL:0000860!5.98e-44!45;CL:0000766!2.21e-40!76;CL:0000738!1.20e-37!140;CL:0000557!3.12e-35!71;CL:0002009!7.79e-35!65;CL:0002194!5.95e-33!63;CL:0000576!5.95e-33!63;CL:0000040!5.95e-33!63;CL:0000559!5.95e-33!63;CL:0000839!1.26e-32!70;CL:0002031!1.83e-29!124;CL:0002087!4.49e-29!119;CL:0000037!2.13e-25!172;CL:0000566!2.13e-25!172;CL:0000988!4.99e-24!182;CL:0000763!6.22e-23!112;CL:0000049!6.22e-23!112;CL:0002032!1.07e-22!165;CL:0000837!1.07e-22!165;CL:0002393!8.41e-10!9;CL:0002397!8.41e-10!9;CL:0000134!8.44e-10!358;CL:0002320!4.34e-09!365;CL:0000094!1.58e-07!8;CL:0000624!4.56e-07!6 | |ontology_enrichment_celltype=CL:0002057!2.30e-48!42;CL:0000860!5.98e-44!45;CL:0000766!2.21e-40!76;CL:0000738!1.20e-37!140;CL:0000557!3.12e-35!71;CL:0002009!7.79e-35!65;CL:0002194!5.95e-33!63;CL:0000576!5.95e-33!63;CL:0000040!5.95e-33!63;CL:0000559!5.95e-33!63;CL:0000839!1.26e-32!70;CL:0002031!1.83e-29!124;CL:0002087!4.49e-29!119;CL:0000037!2.13e-25!172;CL:0000566!2.13e-25!172;CL:0000988!4.99e-24!182;CL:0000763!6.22e-23!112;CL:0000049!6.22e-23!112;CL:0002032!1.07e-22!165;CL:0000837!1.07e-22!165;CL:0002393!8.41e-10!9;CL:0002397!8.41e-10!9;CL:0000134!8.44e-10!358;CL:0002320!4.34e-09!365;CL:0000094!1.58e-07!8;CL:0000624!4.56e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.52e-92;33!CL:0002057;1.52e-92;33!CL:0000473;1.46e-62;39!CL:0000234;1.46e-62;39!CL:0000576;3.00e-41;48!CL:0000766;7.87e-28;69!CL:0002087;4.73e-15;104!CL:0000763;1.70e-14;100!CL:0000738;2.77e-10;136!CL:0000094;1.58e-09;8!CL:0000767;3.43e-07;3!CL:0000623;5.90e-07;3!CL:0000081;6.02e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,6.07e-78,42;CL:0002057,6.07e-78,42;CL:0000473,2.01e-67,48;CL:0000234,2.01e-67,48;CL:0000766,1.61e-60,72;CL:0002194,1.09e-52,59;CL:0000576,1.09e-52,59;CL:0000040,1.09e-52,59;CL:0000559,1.09e-52,59;CL:0002009,8.64e-51,61;CL:0000839,3.17e-50,66;CL:0000557,2.16e-49,67;CL:0000738,3.33e-45,136;CL:0000763,3.24e-38,108;CL:0000049,3.24e-38,108;CL:0002087,8.92e-38,115;CL:0002031,5.43e-36,120;CL:0000037,3.47e-35,168;CL:0000988,5.14e-33,177;CL:0002032,8.09e-33,161;CL:0000837,8.09e-33,161;CL:0000134,1.10e-15,354;CL:0002320,3.18e-15,361;CL:0000219,1.33e-13,386;CL:0000048,1.29e-11,427;CL:0000723,2.43e-11,433;CL:0000034,5.50e-11,441;CL:0000094,1.87e-09,8;CL:0000767,4.62e-07,3;CL:0000623,5.90e-07,3;CL:0000825,5.90e-07,3;CL:0000081,6.79e-07,11 | |||
|ontology_enrichment_development_v019=CL:0002057;8.42e-57;42!CL:0000049;5.18e-11;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.58e-30!80;UBERON:0002390!4.39e-29!102;UBERON:0003061!4.39e-29!102;UBERON:0001474!7.45e-27!86;UBERON:0002193!2.05e-25!112;UBERON:0004765!6.96e-22!101;UBERON:0001434!6.96e-22!101;UBERON:0002405!1.75e-19!115;UBERON:0003081!4.38e-13!216;UBERON:0002204!5.98e-11!167;UBERON:0002384!1.48e-08!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,7.21e-43,76;UBERON:0001474,2.64e-39,82;UBERON:0004765,2.77e-35,90;UBERON:0002390,2.21e-34,98;UBERON:0003061,2.21e-34,98;UBERON:0002405,5.94e-34,93;UBERON:0001434,3.74e-31,100;UBERON:0002193,1.27e-30,108;UBERON:0002204,3.55e-16,167;UBERON:0003081,1.03e-15,203;UBERON:0002384,1.35e-14,371;UBERON:0000926,9.66e-08,315;UBERON:0004120,9.66e-08,315;UBERON:0006603,9.66e-08,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602694528023977,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,3.14691421479123,0.383829398097213,1.08371286321253,0,0,0.369754010166788,0,0,0,0.553995408531877,0.601633342410425,0.651032612147555,0,0,0.257575567634187,1.30858414901608,1.51150377475524,0.970336244751265,2.32429036905685,4.93401465626191,7.74265927237759,4.89077066947656,1.2808035326455,4.49316236788312,6.89491361473237,5.16387746867061,12.1883837934908,3.57660445130949,1.91034305040492,2.47195832889593,5.81559395504715,4.8139354061414,5.11469700639233,0.329851300186716,0.997318288108159,1.70489900213078,2.03146467040009,1.13477044938228,1.86846674698672,4.77372463987812,3.65038042894141,7.38442071997397,3.63239701580021,4.05105399586321,2.53169909952708,0.845021145247767,0.637812899895131,0.838634582033504,0.786300418025466,0.600707571366025,0.803627933485401,0.285012743741249,0.79566670879636,0.730656615058536,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0.196709770113833,1.57204305099666,0.616804496998528,0,0.977766799900771,0.946895611469467,0,0,1.17842362989935,0.886135578334485,0.541607727530031,0.128091319725675,0,0.328875809207352,0.276350017785848,0,0,0,0,0,0.383220493601921,0.34362744548263,0,0,0,0,0.301150238155546,0,0,0,0,0.604820229674197,1.33720097891754,0.579297615531196,0,0,0.12786256184353,0,0,0,0,0.486634870302636,0,0,0,0.0654895377488563,0,0,0,0,0.132957960518865,0.238490624305342,1.71598473234038,0.74291500265913,0,0,0.347140501607594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,1.06748995729705,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204154171254893,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0.113432183160021,0.538168907066586,0,0,0,0,0.515281080091258,0,0,0,0.757301322732344,0,0,0,0,0,0.193260853163297,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.297262324577456,0,0.16798212819886,0,0,0,0,0,0,1.4512968087854,0.432359860250884,0.6312121671319,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0.205476322550383,0,0,1.18218456121156,1.50939302401662,0.641715181398742,0,0,0,0,0,0.749007023947182,2.99161459204025,0.828831026872071,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0,0,0,0,0.620304078368662,0.215714200818617,1.06727557803444,0.606255142892519,0,0,0,0,0,0.128139149255701,0,0,0,0.154209693802656,0,0,0,0.116210378459959,0,0,0,0,0.182091168006717,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14853107599234,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0.127612712494584,0.30347334256665,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0.202910376962704,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0.569647187174163,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.71623345421307,0,0.614321404198464,0,0,0.111308705022906,0,0,0.19924798825107,0,0,0,0.123084805461069,0,0.808815160325942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0.0769502585037971,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0.296521128680622,0,0.104421949505455,0.067401132980677,0,0,0,0,0.242780379534093,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0.17472666824203,0,0,0,0,0.0969890164884194,0,0,0,0.596143835108969,0,0,0.320635281006135,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0,0,0,0,0.674921674654501,0.77380195455795,0.121499113316049,0,0,0.0524545881349981,0.316801009558219,0,0.383830394638891,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213574825135389,0.314408610199332,0.414239055347196,0,0,0,0,0.544017803369474,0.5013797880454,0.306345576763462,0,0,0,0.244052529803926,0.1251909307065,0,0,0,0,0,0.151649117541648,0,0,0,0,0,0,0,0.189403005275089,0,0,0,0,0,0.147855149989634,0.159296767163702,0.899606224327209,0.155262956876259,0,0,0,0,0,0,0.181848659202559,0.214821114084977,0,0,0,0,0,0,0,0,0,0,0,0.244736704506468,0,0,0,0,0,0,0,0,0.303859956177382,0,0,0,0,0,0.245772908753719,0,0.19998739585493,0,0,0,1.28874165176289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.3062454773532,0.128458450192919,0,0,0,0,0.138314504928436,0,0,0,0,0,0.115525666150338,0,0,0,0.451261970095544,0.60511520611056,0,0,0.327543835020193,0.443568258651136,0.0675375846183947,0,0,0.126831620387814,0,0,0,0,0,0,0,0,0,0.443511850813194,0.460935950223117,0,0,0,0,0,0,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.905777061400041,0.0771741581079447,0,0,0,0,0,0,0,0.169927114687817,0.0939839179798536,0,0,0,0.352894871715692,0,0,0.458729283404541,0,0,0.271965960763659,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639701945702943,0,0.0645889098360061,0,0,0.0636471582781649,0,0,0,0.0673520530145875,0,0,0.0814032686109745,0.106727345877715,0,0,0,0,0,0,0.201273793591026,0.320568492303233 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602694528023977,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,3.14691421479123,0.383829398097213,1.08371286321253,0,0,0.369754010166788,0,0,0,0.553995408531877,0.601633342410425,0.651032612147555,0,0,0.257575567634187,1.30858414901608,1.51150377475524,0.970336244751265,2.32429036905685,4.93401465626191,7.74265927237759,4.89077066947656,1.2808035326455,4.49316236788312,6.89491361473237,5.16387746867061,12.1883837934908,3.57660445130949,1.91034305040492,2.47195832889593,5.81559395504715,4.8139354061414,5.11469700639233,0.329851300186716,0.997318288108159,1.70489900213078,2.03146467040009,1.13477044938228,1.86846674698672,4.77372463987812,3.65038042894141,7.38442071997397,3.63239701580021,4.05105399586321,2.53169909952708,0.845021145247767,0.637812899895131,0.838634582033504,0.786300418025466,0.600707571366025,0.803627933485401,0.285012743741249,0.79566670879636,0.730656615058536,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0.196709770113833,1.57204305099666,0.616804496998528,0,0.977766799900771,0.946895611469467,0,0,1.17842362989935,0.886135578334485,0.541607727530031,0.128091319725675,0,0.328875809207352,0.276350017785848,0,0,0,0,0,0.383220493601921,0.34362744548263,0,0,0,0,0.301150238155546,0,0,0,0,0.604820229674197,1.33720097891754,0.579297615531196,0,0,0.12786256184353,0,0,0,0,0.486634870302636,0,0,0,0.0654895377488563,0,0,0,0,0.132957960518865,0.238490624305342,1.71598473234038,0.74291500265913,0,0,0.347140501607594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,1.06748995729705,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204154171254893,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0.113432183160021,0.538168907066586,0,0,0,0,0.515281080091258,0,0,0,0.757301322732344,0,0,0,0,0,0.193260853163297,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.297262324577456,0,0.16798212819886,0,0,0,0,0,0,1.4512968087854,0.432359860250884,0.6312121671319,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0.205476322550383,0,0,1.18218456121156,1.50939302401662,0.641715181398742,0,0,0,0,0,0.749007023947182,2.99161459204025,0.828831026872071,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0,0,0,0,0.620304078368662,0.215714200818617,1.06727557803444,0.606255142892519,0,0,0,0,0,0.128139149255701,0,0,0,0.154209693802656,0,0,0,0.116210378459959,0,0,0,0,0.182091168006717,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14853107599234,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0.127612712494584,0.30347334256665,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0.202910376962704,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0.569647187174163,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.71623345421307,0,0.614321404198464,0,0,0.111308705022906,0,0,0.19924798825107,0,0,0,0.123084805461069,0,0.808815160325942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0.0769502585037971,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0.296521128680622,0,0.104421949505455,0.067401132980677,0,0,0,0,0.242780379534093,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0.17472666824203,0,0,0,0,0.0969890164884194,0,0,0,0.596143835108969,0,0,0.320635281006135,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0,0,0,0,0.674921674654501,0.77380195455795,0.121499113316049,0,0,0.0524545881349981,0.316801009558219,0,0.383830394638891,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213574825135389,0.314408610199332,0.414239055347196,0,0,0,0,0.544017803369474,0.5013797880454,0.306345576763462,0,0,0,0.244052529803926,0.1251909307065,0,0,0,0,0,0.151649117541648,0,0,0,0,0,0,0,0.189403005275089,0,0,0,0,0,0.147855149989634,0.159296767163702,0.899606224327209,0.155262956876259,0,0,0,0,0,0,0.181848659202559,0.214821114084977,0,0,0,0,0,0,0,0,0,0,0,0.244736704506468,0,0,0,0,0,0,0,0,0.303859956177382,0,0,0,0,0,0.245772908753719,0,0.19998739585493,0,0,0,1.28874165176289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.3062454773532,0.128458450192919,0,0,0,0,0.138314504928436,0,0,0,0,0,0.115525666150338,0,0,0,0.451261970095544,0.60511520611056,0,0,0.327543835020193,0.443568258651136,0.0675375846183947,0,0,0.126831620387814,0,0,0,0,0,0,0,0,0,0.443511850813194,0.460935950223117,0,0,0,0,0,0,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.905777061400041,0.0771741581079447,0,0,0,0,0,0,0,0.169927114687817,0.0939839179798536,0,0,0,0.352894871715692,0,0,0.458729283404541,0,0,0.271965960763659,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639701945702943,0,0.0645889098360061,0,0,0.0636471582781649,0,0,0,0.0673520530145875,0,0,0.0814032686109745,0.106727345877715,0,0,0,0,0,0,0.201273793591026,0.320568492303233 | ||
|short_description=p5@ERN1 | |short_description=p5@ERN1 | ||
}} | }} |
Latest revision as of 19:19, 16 September 2015
Short description: | p5@ERN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_ERN1_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | 0bp_to_AK055561_5end |
EntrezGene: | ERN1 |
HGNC: | 3449 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 7.21e-43 | 76 |
bone element | 2.64e-39 | 82 |
skeletal element | 2.77e-35 | 90 |
hematopoietic system | 2.21e-34 | 98 |
blood island | 2.21e-34 | 98 |
immune system | 5.94e-34 | 93 |
skeletal system | 3.74e-31 | 100 |
hemolymphoid system | 1.27e-30 | 108 |
musculoskeletal system | 3.55e-16 | 167 |
lateral plate mesoderm | 1.03e-15 | 203 |
connective tissue | 1.35e-14 | 371 |
mesoderm | 9.66e-08 | 315 |
mesoderm-derived structure | 9.66e-08 | 315 |
presumptive mesoderm | 9.66e-08 | 315 |