FFCP PHASE1:Hg19::chr12:120638905..120638915,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6175 | |EntrezGene=6175 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10371 | |HGNC=10371 | ||
|TSSclassifier=strong | |||
|UniProt=Q3B7A4,F8VWS0,F8VPE8,F8VYN4 | |UniProt=Q3B7A4,F8VWS0,F8VPE8,F8VYN4 | ||
|association_with_transcript=0bp_to_ENST00000313104,ENST00000546989,ENST00000547191,ENST00000548495,ENST00000548551,ENST00000549098,ENST00000549242,ENST00000552461_5end | |association_with_transcript=0bp_to_ENST00000313104,ENST00000546989,ENST00000547191,ENST00000548495,ENST00000548551,ENST00000549098,ENST00000549242,ENST00000552461_5end | ||
|cluster_id=chr12:120638905..120638915,- | |||
|description=CAGE_peak_1_at_RPLP0_5end | |description=CAGE_peak_1_at_RPLP0_5end | ||
|id=chr12:120638905..120638915,- | |id=chr12:120638905..120638915,- | ||
|ontology_enrichment_celltype=CL:0000012!2.34e-39!682;CL:0000548!8.90e-38!679;CL:0000004!8.90e-38!679;CL:0000255!8.90e-38!679;CL:0000144!1.40e-29!625;CL:0000003!4.32e-28!722;CL:0002371!6.71e-23!591;CL:0002321!3.61e-14!248;CL:0000063!4.21e-14!578;CL:0000220!7.14e-14!246;CL:0000055!2.50e-13!180;CL:0000222!3.53e-12!119;CL:0000183!3.38e-11!59;CL:0000187!3.08e-09!54;CL:0000393!3.59e-09!60;CL:0000211!3.59e-09!60;CL:0000066!3.78e-09!254;CL:0000680!1.29e-08!57;CL:0000056!1.29e-08!57;CL:0000355!1.29e-08!57;CL:0000192!9.39e-08!42;CL:0000514!9.39e-08!42;CL:0000034!6.52e-07!444 | |ontology_enrichment_celltype=CL:0000012!2.34e-39!682;CL:0000548!8.90e-38!679;CL:0000004!8.90e-38!679;CL:0000255!8.90e-38!679;CL:0000144!1.40e-29!625;CL:0000003!4.32e-28!722;CL:0002371!6.71e-23!591;CL:0002321!3.61e-14!248;CL:0000063!4.21e-14!578;CL:0000220!7.14e-14!246;CL:0000055!2.50e-13!180;CL:0000222!3.53e-12!119;CL:0000183!3.38e-11!59;CL:0000187!3.08e-09!54;CL:0000393!3.59e-09!60;CL:0000211!3.59e-09!60;CL:0000066!3.78e-09!254;CL:0000680!1.29e-08!57;CL:0000056!1.29e-08!57;CL:0000355!1.29e-08!57;CL:0000192!9.39e-08!42;CL:0000514!9.39e-08!42;CL:0000034!6.52e-07!444 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,8.53e-15,250;CL:0000222,7.30e-13,121;CL:0000187,1.19e-09,55;CL:0000393,1.43e-09,61;CL:0000211,1.43e-09,61;CL:0000680,5.20e-09,58;CL:0000056,5.20e-09,58;CL:0000355,5.20e-09,58;CL:0000066,6.96e-09,253;CL:0000192,3.62e-08,43;CL:0000514,3.62e-08,43;CL:0000034,3.50e-07,441 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000486!4.88e-10!82;UBERON:0004290!9.83e-10!70;UBERON:0000914!1.84e-09!83;UBERON:0002329!1.84e-09!83;UBERON:0003077!1.84e-09!83;UBERON:0003059!1.84e-09!83;UBERON:0007282!1.84e-09!83;UBERON:0009618!1.84e-09!83;UBERON:0007285!1.84e-09!83;UBERON:0003104!9.64e-09!238;UBERON:0009142!9.64e-09!238;UBERON:0003914!4.76e-08!118;UBERON:0005256!9.82e-08!143;UBERON:0001134!1.11e-07!61;UBERON:0002036!1.11e-07!61;UBERON:0003082!1.11e-07!61;UBERON:0002049!2.53e-07!79;UBERON:0007798!2.53e-07!79;UBERON:0004872!5.77e-07!84;UBERON:0002100!6.18e-07!216;UBERON:0001637!6.85e-07!42;UBERON:0003509!6.85e-07!42;UBERON:0004572!6.85e-07!42;UBERON:0000490!7.45e-07!138;UBERON:0002385!9.48e-07!63;UBERON:0001015!9.48e-07!63;UBERON:0000383!9.48e-07!63 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007503,1.87e-12,78;UBERON:0000486,2.04e-10,83;UBERON:0002329,3.99e-10,71;UBERON:0003059,3.99e-10,71;UBERON:0007282,3.99e-10,71;UBERON:0004290,3.99e-10,71;UBERON:0009618,3.99e-10,71;UBERON:0007524,1.25e-09,73;UBERON:0003077,1.67e-09,72;UBERON:0007285,1.67e-09,72;UBERON:0000490,8.74e-09,148;UBERON:0001134,4.74e-08,62;UBERON:0002036,4.74e-08,62;UBERON:0003082,4.74e-08,62;UBERON:0003914,9.57e-08,117;UBERON:0002049,1.96e-07,78;UBERON:0007798,1.96e-07,78;UBERON:0002100,2.99e-07,199;UBERON:0002385,4.28e-07,64;UBERON:0001015,4.28e-07,64;UBERON:0000383,4.28e-07,64;UBERON:0004872,4.57e-07,83;UBERON:0001637,6.85e-07,42;UBERON:0003509,6.85e-07,42;UBERON:0004572,6.85e-07,42;UBERON:0007500,8.00e-07,59;UBERON:0001981,8.00e-07,59;UBERON:0004537,8.00e-07,59;UBERON:0006965,8.00e-07,59;UBERON:0003104,8.07e-07,160;UBERON:0009142,8.07e-07,160 | |||
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| ||
|short_description=p1@RPLP0 | |short_description=p1@RPLP0 | ||
}} | }} |
Latest revision as of 19:22, 16 September 2015
Short description: | p1@RPLP0 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RPLP0_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000313104, ENST00000546989, ENST00000547191, ENST00000548495, ENST00000548551, ENST00000549098, ENST00000549242, ENST00000552461_5end |
EntrezGene: | RPLP0 |
HGNC: | 10371 |
UniProt: | Q3B7A4F8VWS0F8VPE8F8VYN4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 8.53e-15 | 250 |
mesodermal cell | 7.30e-13 | 121 |
muscle cell | 1.19e-09 | 55 |
electrically responsive cell | 1.43e-09 | 61 |
electrically active cell | 1.43e-09 | 61 |
muscle precursor cell | 5.20e-09 | 58 |
myoblast | 5.20e-09 | 58 |
multi-potent skeletal muscle stem cell | 5.20e-09 | 58 |
epithelial cell | 6.96e-09 | 253 |
smooth muscle cell | 3.62e-08 | 43 |
smooth muscle myoblast | 3.62e-08 | 43 |
stem cell | 3.50e-07 | 441 |
Ontology term | p-value | n |
---|---|---|
epithelial vesicle | 1.87e-12 | 78 |
multilaminar epithelium | 2.04e-10 | 83 |
somite | 3.99e-10 | 71 |
presomitic mesoderm | 3.99e-10 | 71 |
presumptive segmental plate | 3.99e-10 | 71 |
dermomyotome | 3.99e-10 | 71 |
trunk paraxial mesoderm | 3.99e-10 | 71 |
dense mesenchyme tissue | 1.25e-09 | 73 |
paraxial mesoderm | 1.67e-09 | 72 |
presumptive paraxial mesoderm | 1.67e-09 | 72 |
unilaminar epithelium | 8.74e-09 | 148 |
skeletal muscle tissue | 4.74e-08 | 62 |
striated muscle tissue | 4.74e-08 | 62 |
myotome | 4.74e-08 | 62 |
epithelial tube | 9.57e-08 | 117 |
vasculature | 1.96e-07 | 78 |
vascular system | 1.96e-07 | 78 |
trunk | 2.99e-07 | 199 |
muscle tissue | 4.28e-07 | 64 |
musculature | 4.28e-07 | 64 |
musculature of body | 4.28e-07 | 64 |
splanchnic layer of lateral plate mesoderm | 4.57e-07 | 83 |
artery | 6.85e-07 | 42 |
arterial blood vessel | 6.85e-07 | 42 |
arterial system | 6.85e-07 | 42 |
epithelial tube open at both ends | 8.00e-07 | 59 |
blood vessel | 8.00e-07 | 59 |
blood vasculature | 8.00e-07 | 59 |
vascular cord | 8.00e-07 | 59 |
mesenchyme | 8.07e-07 | 160 |
entire embryonic mesenchyme | 8.07e-07 | 160 |