FFCP PHASE1:Hg19::chr2:127822351..127822364,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=274 | |EntrezGene=274 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1052 | |HGNC=1052 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=21bp_to_ENST00000484253_5end | |association_with_transcript=21bp_to_ENST00000484253_5end | ||
|cluster_id=chr2:127822351..127822364,- | |||
|coexpression_cluster_id=C0 | |coexpression_cluster_id=C0 | ||
|description=CAGE_peak_13_at_BIN1_5end | |description=CAGE_peak_13_at_BIN1_5end | ||
|id=chr2:127822351..127822364,- | |id=chr2:127822351..127822364,- | ||
|ontology_enrichment_celltype=CL:0002057!7.30e-55!42;CL:0000860!1.79e-50!45;CL:0002194!2.16e-34!63;CL:0000576!2.16e-34!63;CL:0000040!2.16e-34!63;CL:0000559!2.16e-34!63;CL:0002009!5.10e-33!65;CL:0000766!1.66e-30!76;CL:0000839!6.23e-30!70;CL:0000557!2.29e-29!71;CL:0000763!1.11e-19!112;CL:0000049!1.11e-19!112;CL:0002087!1.24e-15!119;CL:0000738!1.18e-13!140;CL:0002031!1.26e-13!124;CL:0000988!1.10e-11!182;CL:0002032!8.37e-11!165;CL:0000837!8.37e-11!165;CL:0000037!1.15e-10!172;CL:0000566!1.15e-10!172 | |ontology_enrichment_celltype=CL:0002057!7.30e-55!42;CL:0000860!1.79e-50!45;CL:0002194!2.16e-34!63;CL:0000576!2.16e-34!63;CL:0000040!2.16e-34!63;CL:0000559!2.16e-34!63;CL:0002009!5.10e-33!65;CL:0000766!1.66e-30!76;CL:0000839!6.23e-30!70;CL:0000557!2.29e-29!71;CL:0000763!1.11e-19!112;CL:0000049!1.11e-19!112;CL:0002087!1.24e-15!119;CL:0000738!1.18e-13!140;CL:0002031!1.26e-13!124;CL:0000988!1.10e-11!182;CL:0002032!8.37e-11!165;CL:0000837!8.37e-11!165;CL:0000037!1.15e-10!172;CL:0000566!1.15e-10!172 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.68e-135;33!CL:0002057;2.68e-135;33!CL:0000473;1.59e-93;39!CL:0000234;1.59e-93;39!CL:0000576;7.64e-71;48!CL:0000766;6.18e-41;69!CL:0000763;4.47e-19;100!CL:0002087;1.90e-18;104!CL:0000738;9.96e-12;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.26e-131,42;CL:0002057,1.26e-131,42;CL:0000473,1.88e-114,48;CL:0000234,1.88e-114,48;CL:0002194,2.12e-90,59;CL:0000576,2.12e-90,59;CL:0000040,2.12e-90,59;CL:0000559,2.12e-90,59;CL:0002009,2.69e-87,61;CL:0000839,2.41e-80,66;CL:0000557,4.46e-79,67;CL:0000766,5.12e-78,72;CL:0000763,2.80e-50,108;CL:0000049,2.80e-50,108;CL:0002087,6.55e-47,115;CL:0002031,1.01e-44,120;CL:0000738,2.13e-41,136;CL:0002032,4.60e-34,161;CL:0000837,4.60e-34,161;CL:0000037,2.13e-32,168;CL:0000988,1.90e-30,177;CL:0000134,4.15e-12,354;CL:0002320,9.49e-12,361;CL:0000219,1.76e-10,386;CL:0000048,8.52e-10,427;CL:0000723,1.44e-09,433;CL:0000034,2.82e-09,441 | |||
|ontology_enrichment_development_v019=CL:0002057;5.12e-98;42!CL:0000049;2.38e-15;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!6.41e-25!80;UBERON:0001474!1.77e-22!86;UBERON:0002390!5.29e-21!102;UBERON:0003061!5.29e-21!102;UBERON:0004765!7.52e-19!101;UBERON:0001434!7.52e-19!101;UBERON:0002193!3.54e-18!112;UBERON:0002405!2.65e-15!115;UBERON:0002204!9.22e-13!167;UBERON:0003081!6.08e-12!216 | |ontology_enrichment_uberon=UBERON:0002371!6.41e-25!80;UBERON:0001474!1.77e-22!86;UBERON:0002390!5.29e-21!102;UBERON:0003061!5.29e-21!102;UBERON:0004765!7.52e-19!101;UBERON:0001434!7.52e-19!101;UBERON:0002193!3.54e-18!112;UBERON:0002405!2.65e-15!115;UBERON:0002204!9.22e-13!167;UBERON:0003081!6.08e-12!216 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.79e-69,76;UBERON:0001474,1.01e-63,82;UBERON:0004765,1.34e-57,90;UBERON:0002405,1.43e-55,93;UBERON:0002390,1.83e-52,98;UBERON:0003061,1.83e-52,98;UBERON:0001434,2.62e-51,100;UBERON:0002193,4.19e-47,108;UBERON:0002204,1.63e-30,167;UBERON:0003081,2.44e-22,203;UBERON:0000926,2.73e-13,315;UBERON:0004120,2.73e-13,315;UBERON:0006603,2.73e-13,315;UBERON:0002384,2.93e-11,371 | |||
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| ||
|short_description=p13@BIN1 | |short_description=p13@BIN1 | ||
}} | }} |
Latest revision as of 19:55, 16 September 2015
Short description: | p13@BIN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_BIN1_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | 21bp_to_ENST00000484253_5end |
EntrezGene: | BIN1 |
HGNC: | 1052 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.26e-131 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.26e-131 | 42 |
defensive cell | 1.88e-114 | 48 |
phagocyte | 1.88e-114 | 48 |
monopoietic cell | 2.12e-90 | 59 |
monocyte | 2.12e-90 | 59 |
monoblast | 2.12e-90 | 59 |
promonocyte | 2.12e-90 | 59 |
macrophage dendritic cell progenitor | 2.69e-87 | 61 |
myeloid lineage restricted progenitor cell | 2.41e-80 | 66 |
granulocyte monocyte progenitor cell | 4.46e-79 | 67 |
myeloid leukocyte | 5.12e-78 | 72 |
myeloid cell | 2.80e-50 | 108 |
common myeloid progenitor | 2.80e-50 | 108 |
nongranular leukocyte | 6.55e-47 | 115 |
hematopoietic lineage restricted progenitor cell | 1.01e-44 | 120 |
leukocyte | 2.13e-41 | 136 |
hematopoietic oligopotent progenitor cell | 4.60e-34 | 161 |
hematopoietic multipotent progenitor cell | 4.60e-34 | 161 |
hematopoietic stem cell | 2.13e-32 | 168 |
hematopoietic cell | 1.90e-30 | 177 |
mesenchymal cell | 4.15e-12 | 354 |
connective tissue cell | 9.49e-12 | 361 |
motile cell | 1.76e-10 | 386 |
multi fate stem cell | 8.52e-10 | 427 |
somatic stem cell | 1.44e-09 | 433 |
stem cell | 2.82e-09 | 441 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.79e-69 | 76 |
bone element | 1.01e-63 | 82 |
skeletal element | 1.34e-57 | 90 |
immune system | 1.43e-55 | 93 |
hematopoietic system | 1.83e-52 | 98 |
blood island | 1.83e-52 | 98 |
skeletal system | 2.62e-51 | 100 |
hemolymphoid system | 4.19e-47 | 108 |
musculoskeletal system | 1.63e-30 | 167 |
lateral plate mesoderm | 2.44e-22 | 203 |
mesoderm | 2.73e-13 | 315 |
mesoderm-derived structure | 2.73e-13 | 315 |
presumptive mesoderm | 2.73e-13 | 315 |
connective tissue | 2.93e-11 | 371 |