FFCP PHASE1:Hg19::chr12:121418727..121418744,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=26785 | |HGNC=26785 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-18bp_to_ENST00000537361_5end | |association_with_transcript=-18bp_to_ENST00000537361_5end | ||
|cluster_id=chr12:121418727..121418744,- | |||
|description=CAGE_peak_1_at_HNF1A-AS1_5end | |description=CAGE_peak_1_at_HNF1A-AS1_5end | ||
|id=chr12:121418727..121418744,- | |id=chr12:121418727..121418744,- | ||
|ontology_enrichment_celltype=CL:0000181!3.02e-14!12;CL:0000417!3.02e-14!12;CL:0000668!3.02e-14!12;CL:0000414!3.02e-14!12;CL:0000412!3.02e-14!12;CL:0000182!3.02e-14!12;CL:0000223!3.91e-07!59 | |ontology_enrichment_celltype=CL:0000181!3.02e-14!12;CL:0000417!3.02e-14!12;CL:0000668!3.02e-14!12;CL:0000414!3.02e-14!12;CL:0000412!3.02e-14!12;CL:0000182!3.02e-14!12;CL:0000223!3.91e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:0000182;1.40e-20;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.31e-20,12;CL:0000223,4.84e-12,58 | |||
|ontology_enrichment_development_v019=UBERON:0009497;8.00e-24;13!UBERON:0004161;1.17e-22;11!UBERON:0003104;5.78e-16;31!UBERON:0001041;2.16e-11;30!CL:0000223;1.58e-07;58 | |||
|ontology_enrichment_disease=DOID:299!1.06e-10!25;DOID:305!6.67e-07!106 | |ontology_enrichment_disease=DOID:299!1.06e-10!25;DOID:305!6.67e-07!106 | ||
|ontology_enrichment_disease_v019=DOID:299;1.87e-13;25!DOID:3493;8.33e-09;2!DOID:4468;3.07e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:299,1.83e-13,25;DOID:305,4.36e-10,106;DOID:3493,8.50e-09,2;DOID:4468,2.74e-08,2;DOID:0050687,3.61e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0004921!8.38e-22!129;UBERON:0004185!8.38e-22!129;UBERON:0005409!8.22e-21!35;UBERON:0009854!1.37e-20!23;UBERON:0009497!1.09e-18!25;UBERON:0000015!1.09e-18!25;UBERON:0002423!1.09e-18!25;UBERON:0006235!1.09e-18!25;UBERON:0004161!1.09e-18!25;UBERON:0008835!1.69e-18!22;UBERON:0003894!1.69e-18!22;UBERON:0005172!4.71e-18!55;UBERON:0005173!4.71e-18!55;UBERON:0009856!8.58e-18!26;UBERON:0001007!1.20e-17!155;UBERON:0001555!1.20e-17!155;UBERON:0007026!1.20e-17!155;UBERON:0000160!1.18e-16!27;UBERON:0007499!6.93e-16!25;UBERON:0002107!8.12e-16!19;UBERON:0006925!8.12e-16!19;UBERON:0008836!8.12e-16!19;UBERON:0002417!1.07e-15!61;UBERON:0000916!1.07e-15!61;UBERON:0005177!1.21e-15!107;UBERON:0004119!2.48e-15!169;UBERON:0000925!2.48e-15!169;UBERON:0006595!2.48e-15!169;UBERON:0000077!7.93e-14!130;UBERON:0000466!6.25e-13!126;UBERON:0005057!8.00e-13!26;UBERON:0003929!4.51e-12!54;UBERON:0009569!4.76e-12!113;UBERON:0000059!5.33e-12!11;UBERON:0001041!1.18e-11!98;UBERON:0005911!2.19e-10!82;UBERON:0003104!9.91e-10!238;UBERON:0009142!9.91e-10!238;UBERON:0004907!3.93e-09!5;UBERON:0002365!1.03e-08!31;UBERON:0002330!1.03e-08!31;UBERON:0000481!3.55e-08!347;UBERON:0001155!5.16e-08!9;UBERON:0000949!1.30e-07!45;UBERON:0002368!1.92e-07!35 | |ontology_enrichment_uberon=UBERON:0004921!8.38e-22!129;UBERON:0004185!8.38e-22!129;UBERON:0005409!8.22e-21!35;UBERON:0009854!1.37e-20!23;UBERON:0009497!1.09e-18!25;UBERON:0000015!1.09e-18!25;UBERON:0002423!1.09e-18!25;UBERON:0006235!1.09e-18!25;UBERON:0004161!1.09e-18!25;UBERON:0008835!1.69e-18!22;UBERON:0003894!1.69e-18!22;UBERON:0005172!4.71e-18!55;UBERON:0005173!4.71e-18!55;UBERON:0009856!8.58e-18!26;UBERON:0001007!1.20e-17!155;UBERON:0001555!1.20e-17!155;UBERON:0007026!1.20e-17!155;UBERON:0000160!1.18e-16!27;UBERON:0007499!6.93e-16!25;UBERON:0002107!8.12e-16!19;UBERON:0006925!8.12e-16!19;UBERON:0008836!8.12e-16!19;UBERON:0002417!1.07e-15!61;UBERON:0000916!1.07e-15!61;UBERON:0005177!1.21e-15!107;UBERON:0004119!2.48e-15!169;UBERON:0000925!2.48e-15!169;UBERON:0006595!2.48e-15!169;UBERON:0000077!7.93e-14!130;UBERON:0000466!6.25e-13!126;UBERON:0005057!8.00e-13!26;UBERON:0003929!4.51e-12!54;UBERON:0009569!4.76e-12!113;UBERON:0000059!5.33e-12!11;UBERON:0001041!1.18e-11!98;UBERON:0005911!2.19e-10!82;UBERON:0003104!9.91e-10!238;UBERON:0009142!9.91e-10!238;UBERON:0004907!3.93e-09!5;UBERON:0002365!1.03e-08!31;UBERON:0002330!1.03e-08!31;UBERON:0000481!3.55e-08!347;UBERON:0001155!5.16e-08!9;UBERON:0000949!1.30e-07!45;UBERON:0002368!1.92e-07!35 | ||
|ontology_enrichment_uberon_v019=UBERON:0005409;1.18e-27;22!UBERON:0000160;2.32e-21;17!UBERON:0002423;8.42e-21;25!UBERON:0002107;1.73e-19;19!UBERON:0006925;1.73e-19;19!UBERON:0004921;2.68e-16;33!UBERON:0000059;3.45e-13;11!UBERON:0001155;1.95e-11;9!UBERON:0002365;6.01e-11;31!UBERON:0002330;6.01e-11;31!UBERON:0001007;1.13e-10;81!UBERON:0002368;1.63e-09;33!UBERON:0005172;3.26e-09;52!UBERON:0005173;3.26e-09;52!UBERON:0000949;2.88e-08;43!UBERON:0002108;4.56e-08;4!UBERON:0004907;6.75e-08;5!UBERON:0000945;7.16e-08;5!UBERON:0010039;7.16e-08;5!UBERON:0002417;9.45e-07;58!UBERON:0000916;9.45e-07;58 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,4.24e-24,25;UBERON:0009854,8.32e-23,23;UBERON:0000160,2.32e-21,17;UBERON:0009497,8.12e-21,25;UBERON:0000015,8.12e-21,25;UBERON:0002423,8.12e-21,25;UBERON:0006235,8.12e-21,25;UBERON:0004161,8.12e-21,25;UBERON:0008835,5.07e-20,22;UBERON:0003894,5.07e-20,22;UBERON:0009856,7.22e-20,26;UBERON:0002107,1.66e-19,19;UBERON:0006925,1.66e-19,19;UBERON:0008836,1.66e-19,19;UBERON:0004921,2.71e-18,118;UBERON:0007499,2.44e-17,25;UBERON:0005172,3.68e-15,54;UBERON:0005173,3.68e-15,54;UBERON:0001007,4.91e-15,145;UBERON:0001555,4.91e-15,145;UBERON:0007026,4.91e-15,145;UBERON:0003929,2.20e-13,54;UBERON:0002417,2.84e-13,60;UBERON:0000916,2.84e-13,60;UBERON:0000059,3.41e-13,11;UBERON:0004119,5.18e-13,160;UBERON:0000925,5.18e-13,160;UBERON:0006595,5.18e-13,160;UBERON:0001155,1.93e-11,9;UBERON:0002365,3.50e-11,31;UBERON:0002330,3.50e-11,31;UBERON:0005177,6.96e-11,101;UBERON:0000949,2.14e-10,45;UBERON:0005911,4.07e-10,82;UBERON:0002368,1.11e-09,35;UBERON:0001041,4.55e-08,87;UBERON:0002108,4.61e-08,4;UBERON:0004907,6.75e-08,5;UBERON:0011216,2.25e-07,223;UBERON:0009569,2.95e-07,112 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.37014209540622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464775771478074,0,2.27088765788066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,39.2940607947676,6.87979051674338,12.9973779469909,0,32.0999824597526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.7994634932355,0,0,0,0,0,0,0,0,1.46139224653261,0.105551628892876,0,0,0,0,0,0,0.509752546090077,0,0.223874754722178,0,0,0,0,0,19.5777922130672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,22.1237931825431,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.0355405306165,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,18.787306256118,49.1268858315838,0,0,0,0,8.41399520975363,0,0,0,0,0.969332746095218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.461701551022782,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,1.68798451622422,1.95879369790977,8.19847814316857,0,52.7488823471608,21.4067306098081,39.7169594206857,0,0,0,0,0,0,0,0,0,0,36.2972148145992,0,0,0,0,0,0,0,0,5.69219092059585,0,0,0,0,2.27144668714639,0,0,0,0,0.193978032976839,0,0,0,0,0,0,0,23.4798294213288,0,18.0113021442632,0,27.6267946557763,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0.199679000498991,0,0,0,0,116.495949527454,14.4961055445292,9.88990300573997,15.1657973671916,23.6225955635397,0,0,0,0,0,0,0,0,0,0,8.6686278029118,23.3422917200742,0,0,0,0,0,0,0,0,0,0,0,0,0,12.0172831616028,17.2258955585888,0,0,11.4628181382501,0,0.427149650270779,1.25763444079733,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.38107189034688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12815492523886,0,35.1681305054892,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235479278551542,0,0.280272163313789,31.9605552178323,6.47782773655864,0.47775168788705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.84327799820572,3.14080747568778,18.4096066723227,0,0,0,0,0.233939463462106,0,0,0,0,0,13.968522617538,19.2332413243482,0,0,0,0,0,0,0,0,0.193373663920732,0,0,0,0,43.820183294791,0,0,0,0,0,45.4963082843244,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215166616178029,0.332660356546013,0,0,0,3.50318288215689,0,5.01189921149752,0.813792356631477,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.37014209540622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464775771478074,0,2.27088765788066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,39.2940607947676,6.87979051674338,12.9973779469909,0,32.0999824597526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.7994634932355,0,0,0,0,0,0,0,0,1.46139224653261,0.105551628892876,0,0,0,0,0,0,0.509752546090077,0,0.223874754722178,0,0,0,0,0,19.5777922130672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,22.1237931825431,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.0355405306165,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,18.787306256118,49.1268858315838,0,0,0,0,8.41399520975363,0,0,0,0,0.969332746095218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.461701551022782,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,1.68798451622422,1.95879369790977,8.19847814316857,0,52.7488823471608,21.4067306098081,39.7169594206857,0,0,0,0,0,0,0,0,0,0,36.2972148145992,0,0,0,0,0,0,0,0,5.69219092059585,0,0,0,0,2.27144668714639,0,0,0,0,0.193978032976839,0,0,0,0,0,0,0,23.4798294213288,0,18.0113021442632,0,27.6267946557763,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0.199679000498991,0,0,0,0,116.495949527454,14.4961055445292,9.88990300573997,15.1657973671916,23.6225955635397,0,0,0,0,0,0,0,0,0,0,8.6686278029118,23.3422917200742,0,0,0,0,0,0,0,0,0,0,0,0,0,12.0172831616028,17.2258955585888,0,0,11.4628181382501,0,0.427149650270779,1.25763444079733,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.38107189034688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12815492523886,0,35.1681305054892,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235479278551542,0,0.280272163313789,31.9605552178323,6.47782773655864,0.47775168788705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.84327799820572,3.14080747568778,18.4096066723227,0,0,0,0,0.233939463462106,0,0,0,0,0,13.968522617538,19.2332413243482,0,0,0,0,0,0,0,0,0.193373663920732,0,0,0,0,43.820183294791,0,0,0,0,0,45.4963082843244,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215166616178029,0.332660356546013,0,0,0,3.50318288215689,0,5.01189921149752,0.813792356631477,0,0,0 | ||
|short_description=p1@HNF1A-AS1 | |short_description=p1@HNF1A-AS1 | ||
}} | }} |
Latest revision as of 21:09, 16 September 2015
Short description: | p1@HNF1A-AS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_HNF1A-AS1_5end |
Coexpression cluster: | NA |
Association with transcript: | -18bp_to_ENST00000537361_5end |
EntrezGene: | NA |
HGNC: | 26785 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.31e-20 | 12 |
endodermal cell | 4.84e-12 | 58 |
Ontology term | p-value | n |
---|---|---|
adenocarcinoma | 1.83e-13 | 25 |
carcinoma | 4.36e-10 | 106 |
signet ring cell adenocarcinoma | 8.50e-09 | 2 |
clear cell adenocarcinoma | 2.74e-08 | 2 |
cell type cancer | 3.61e-07 | 143 |