FFCP PHASE1:Hg19::chr17:643754..643786,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79850 | |EntrezGene=79850 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=29646 | |HGNC=29646 | ||
|TSSclassifier=strong | |||
|UniProt=Q8TBR7 | |UniProt=Q8TBR7 | ||
|association_with_transcript=12bp_to_BC009729_5end | |association_with_transcript=12bp_to_BC009729_5end | ||
|cluster_id=chr17:643754..643786,+ | |||
|description=CAGE_peak_12_at_FAM57A_5end | |description=CAGE_peak_12_at_FAM57A_5end | ||
|id=chr17:643754..643786,+ | |id=chr17:643754..643786,+ | ||
|ontology_enrichment_celltype=CL:0002057!3.45e-10!42;CL:0000860!2.00e-09!45;CL:0000766!5.93e-08!76;CL:0000557!2.92e-07!71 | |ontology_enrichment_celltype=CL:0002057!3.45e-10!42;CL:0000860!2.00e-09!45;CL:0000766!5.93e-08!76;CL:0000557!2.92e-07!71 | ||
|ontology_enrichment_celltype_v019=CL:0000860;3.72e-19;33!CL:0002057;3.72e-19;33!CL:0001014;1.42e-16;2!CL:0001016;1.42e-16;2!CL:0000453;2.49e-14;5!CL:0000473;1.72e-12;39!CL:0000234;1.72e-12;39!CL:0000576;3.78e-10;48!CL:0000766;2.73e-08;69!CL:0000990;3.52e-08;8!CL:0000451;9.04e-07;10 | |ontology_enrichment_celltype_v019=CL:0000860;3.72e-19;33!CL:0002057;3.72e-19;33!CL:0001014;1.42e-16;2!CL:0001016;1.42e-16;2!CL:0000453;2.49e-14;5!CL:0000473;1.72e-12;39!CL:0000234;1.72e-12;39!CL:0000576;3.78e-10;48!CL:0000766;2.73e-08;69!CL:0000990;3.52e-08;8!CL:0000451;9.04e-07;10 | ||
|ontology_enrichment_celltype_v019_2=CL:0000860,7.86e-20,42;CL:0002057,7.86e-20,42;CL:0000557,3.77e-19,67;CL:0002009,3.07e-18,61;CL:0000766,1.38e-17,72;CL:0000473,4.10e-17,48;CL:0000234,4.10e-17,48;CL:0000763,9.27e-17,108;CL:0000049,9.27e-17,108;CL:0001014,1.60e-16,2;CL:0001016,1.60e-16,2;CL:0000738,2.18e-14,136;CL:0000453,2.92e-14,5;CL:0000839,5.10e-14,66;CL:0002194,2.62e-13,59;CL:0000576,2.62e-13,59;CL:0000040,2.62e-13,59;CL:0000559,2.62e-13,59;CL:0002032,1.22e-11,161;CL:0000837,1.22e-11,161;CL:0002031,3.61e-11,120;CL:0000037,5.12e-11,168;CL:0000988,2.75e-10,177;CL:0000990,3.84e-08,8;CL:0002087,3.50e-07,115;CL:0000134,5.21e-07,354;CL:0002320,8.61e-07,361;CL:0000451,9.70e-07,10 | |||
|ontology_enrichment_development_v019=CL:0002057;2.35e-12;42 | |ontology_enrichment_development_v019=CL:0002057;2.35e-12;42 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001737!6.24e-07!9 | |ontology_enrichment_uberon=UBERON:0001737!6.24e-07!9 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.32e-16,76;UBERON:0001474,3.25e-15,82;UBERON:0004765,1.20e-13,90;UBERON:0002405,3.97e-13,93;UBERON:0002390,2.48e-12,98;UBERON:0003061,2.48e-12,98;UBERON:0001434,4.91e-12,100;UBERON:0002193,5.84e-11,108 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0.140954404095971,1.0007329835313,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0.273748850145768,0.376627918784408,0.0764134057479513,0,0.0787107813136792,0.393364276848904,0.383829398097213,0.619264493264304,0,0,1.47901604066715,0,0,0,1.10799081706375,0.401088894940283,0.868043482863407,0,0,0.257575567634187,0.145398238779565,0,0.242584061187816,0,0.411167888021826,0.309706370895104,0,0,0.236482229888585,0.344745680736619,0,1.35426486594342,0.376484679085209,0.272906150057846,0.674170453335254,3.06083892370903,1.92557416245656,1.27867425159808,0,0,0,2.90209238628584,2.8369261234557,1.24564449799115,0.251248665256743,0,0.65156653411535,2.42159801053347,1.84138817993782,6.96217252369946,0.422510572623884,0,0,0.22465726229299,0.300353785683013,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0.569212969109448,1.17447437874188,0,0,0,0.263384084775077,0,0,0,0,0.32592226663359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0.289693037921647,0,0.973269740605272,0,0,0,0,0,0,0,0.174129737299267,0,0,0,0,0.198762407366705,0,0,0,0,0.825354125820202,0.208994966536811,0,0,0,0,0,0.488124115096339,0,0,0,0,0,0,0,0,5.27121669744253,0,0,0.496971951695318,0.379891534993739,0,0,0,0.560677600142307,0,0.24666754841716,0,0.134710672069688,0.163461903113459,0,0,0.234321431833797,0.312160076830321,0,0.298897361103602,0.117434498643765,0,0,0,0.122834317311768,0.103325781175765,0,0,0,0.718618141816238,0.168336113954066,0.250237039743928,0,0.438977620880838,0.30648779579902,0,0,0,0.213557388818567,0.211931901159562,0.300091096084402,0,0,0,0.337552664482532,0.194874010322397,0,0.0920498986422993,0,0.355009592516614,0,0.169560592310488,0.193260853163297,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0.354920400119532,0.337169380156203,0.241011029883482,0.661763836394364,0.871517776369625,0.237270619111097,0.539325232640658,0.196221465125346,0.38474715694639,0,1.40241773803446,0,0,0,0,0,0,0.122988438543114,0,0.219500570817251,1.1240175325762,0.301586917234893,0.0925884451585296,0.325808305310325,0,0,0.115930404975077,0,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0.290633938513962,0,0,0.088048434013226,1.24396869324463,0.432359860250884,0.88369703398466,0.126995788584338,0,0,0,0.411309970813294,0,0,0,0,0.07333828582095,0,0,0.845302752556,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0.239624855491583,0,0,0.144781306667579,0.205476322550383,0.179060963239896,0,0,0,0,0,0,0,0.167516265334349,0,0,0,1.24324654030811,0,0,0,0,0.892144943985809,0.473107245101804,0,0,0,1.03473071292505,0,0,0,0,0,0,0.647142602455851,0.320182673410333,0,0,0,0,0,0,0.128139149255701,0,0.160853921143607,0,0.771048469013278,0.177561725313127,0,0,0.348631135379878,0,0.802025881213139,0.184161977871793,0.34444334449382,0.364182336013434,0,0.451199612907412,0.0770153371044148,0,0,0.105551628892876,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0,0,0.650060246036521,0,0,0.154048617114644,0.460511024178389,0.137836572484531,0,0,0.170453254832202,0,0.330569830721956,0,0,0.10115778085555,0.464845549297286,0.31481234683064,0,0,0,0,0,0.143124886741991,0,0,0.190630193923825,0,0,0,0.78494864019923,0,0.274537029736055,0.471249609382746,0,0,0,0,0,0,0,0.424216295861138,0,0.551365343546124,0.66343897524122,0.438450885253763,0,0,0.202910376962704,0.30982349809975,0.281695602532241,0,0,0,0,0.422215270595328,0.329294892959902,0,0.349934720244983,0,0,1.08890984861323,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425846237690326,0,0,0,0,0,0,0,0.270455678475983,0,0,0.18714054040822,0,0,0.111443384277478,0,0.23874448473769,0,0,0,0,0,0,0,0.398495976502139,0,0,0.20453736500431,0.246169610922139,0.622079175323615,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0,0,0,0,0,0,0.139423744278603,0,0.113942055847001,0,0.0897576444097721,0,0.31900115973192,0.0915975934018623,0,0,0,0,0.225595660617181,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0.123563938946503,0,0,0.802577647298789,0,0.182454789215666,0,0,0,0,0.30607276163049,0,0,0.207376382794494,0,0,0,0,0,0,0.173559738335131,0.0979923974143777,0,0,0,0,0,0.0821154570532092,0.290967049465258,0,0.225980740780532,0.137041924646751,0.19871461170299,0,0.195551382734803,0,0,0.19980960958213,0.144090417154106,0,0,0.14405479798815,0,0,0,0.209205692624666,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0.429226048136571,0,0.0671834724867263,0,0,0.0787831823072236,0.247247575143499,0.26961417541674,0.0984274815147488,0,0,0.136203406111576,0,0.137539436597234,0,10.5737729029205,2.32140586367385,0,0.335434687599266,0,0.0524545881349981,0,0.179287339332845,0,0,0,0,0,0,0.653174720218818,0,0,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0.0620964029413835,0,0,0,0,0.470531639396343,0,0.28984205722165,0.149254802886874,0.233713309847224,0,0,0,0,0.228840068396924,0.151230923763239,0,0.147855149989634,0,0,0.155262956876259,0,0,0,0,0,0.406870733204662,0,0.107410557042488,0,0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|phase1_expression=0.181678379270557,0.214100523890983,0.140954404095971,1.0007329835313,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0.273748850145768,0.376627918784408,0.0764134057479513,0,0.0787107813136792,0.393364276848904,0.383829398097213,0.619264493264304,0,0,1.47901604066715,0,0,0,1.10799081706375,0.401088894940283,0.868043482863407,0,0,0.257575567634187,0.145398238779565,0,0.242584061187816,0,0.411167888021826,0.309706370895104,0,0,0.236482229888585,0.344745680736619,0,1.35426486594342,0.376484679085209,0.272906150057846,0.674170453335254,3.06083892370903,1.92557416245656,1.27867425159808,0,0,0,2.90209238628584,2.8369261234557,1.24564449799115,0.251248665256743,0,0.65156653411535,2.42159801053347,1.84138817993782,6.96217252369946,0.422510572623884,0,0,0.22465726229299,0.300353785683013,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0.569212969109448,1.17447437874188,0,0,0,0.263384084775077,0,0,0,0,0.32592226663359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0.289693037921647,0,0.973269740605272,0,0,0,0,0,0,0,0.174129737299267,0,0,0,0,0.198762407366705,0,0,0,0,0.825354125820202,0.208994966536811,0,0,0,0,0,0.488124115096339,0,0,0,0,0,0,0,0,5.27121669744253,0,0,0.496971951695318,0.379891534993739,0,0,0,0.560677600142307,0,0.24666754841716,0,0.134710672069688,0.163461903113459,0,0,0.234321431833797,0.312160076830321,0,0.298897361103602,0.117434498643765,0,0,0,0.122834317311768,0.103325781175765,0,0,0,0.718618141816238,0.168336113954066,0.250237039743928,0,0.438977620880838,0.30648779579902,0,0,0,0.213557388818567,0.211931901159562,0.300091096084402,0,0,0,0.337552664482532,0.194874010322397,0,0.0920498986422993,0,0.355009592516614,0,0.169560592310488,0.193260853163297,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0.354920400119532,0.337169380156203,0.241011029883482,0.661763836394364,0.871517776369625,0.237270619111097,0.539325232640658,0.196221465125346,0.38474715694639,0,1.40241773803446,0,0,0,0,0,0,0.122988438543114,0,0.219500570817251,1.1240175325762,0.301586917234893,0.0925884451585296,0.325808305310325,0,0,0.115930404975077,0,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0.290633938513962,0,0,0.088048434013226,1.24396869324463,0.432359860250884,0.88369703398466,0.126995788584338,0,0,0,0.411309970813294,0,0,0,0,0.07333828582095,0,0,0.845302752556,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0.239624855491583,0,0,0.144781306667579,0.205476322550383,0.179060963239896,0,0,0,0,0,0,0,0.167516265334349,0,0,0,1.24324654030811,0,0,0,0,0.892144943985809,0.473107245101804,0,0,0,1.03473071292505,0,0,0,0,0,0,0.647142602455851,0.320182673410333,0,0,0,0,0,0,0.128139149255701,0,0.160853921143607,0,0.771048469013278,0.177561725313127,0,0,0.348631135379878,0,0.802025881213139,0.184161977871793,0.34444334449382,0.364182336013434,0,0.451199612907412,0.0770153371044148,0,0,0.105551628892876,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0,0,0.650060246036521,0,0,0.154048617114644,0.460511024178389,0.137836572484531,0,0,0.170453254832202,0,0.330569830721956,0,0,0.10115778085555,0.464845549297286,0.31481234683064,0,0,0,0,0,0.143124886741991,0,0,0.190630193923825,0,0,0,0.78494864019923,0,0.274537029736055,0.471249609382746,0,0,0,0,0,0,0,0.424216295861138,0,0.551365343546124,0.66343897524122,0.438450885253763,0,0,0.202910376962704,0.30982349809975,0.281695602532241,0,0,0,0,0.422215270595328,0.329294892959902,0,0.349934720244983,0,0,1.08890984861323,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425846237690326,0,0,0,0,0,0,0,0.270455678475983,0,0,0.18714054040822,0,0,0.111443384277478,0,0.23874448473769,0,0,0,0,0,0,0,0.398495976502139,0,0,0.20453736500431,0.246169610922139,0.622079175323615,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0,0,0,0,0,0,0.139423744278603,0,0.113942055847001,0,0.0897576444097721,0,0.31900115973192,0.0915975934018623,0,0,0,0,0.225595660617181,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0.123563938946503,0,0,0.802577647298789,0,0.182454789215666,0,0,0,0,0.30607276163049,0,0,0.207376382794494,0,0,0,0,0,0,0.173559738335131,0.0979923974143777,0,0,0,0,0,0.0821154570532092,0.290967049465258,0,0.225980740780532,0.137041924646751,0.19871461170299,0,0.195551382734803,0,0,0.19980960958213,0.144090417154106,0,0,0.14405479798815,0,0,0,0.209205692624666,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0.429226048136571,0,0.0671834724867263,0,0,0.0787831823072236,0.247247575143499,0.26961417541674,0.0984274815147488,0,0,0.136203406111576,0,0.137539436597234,0,10.5737729029205,2.32140586367385,0,0.335434687599266,0,0.0524545881349981,0,0.179287339332845,0,0,0,0,0,0,0.653174720218818,0,0,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0.0620964029413835,0,0,0,0,0.470531639396343,0,0.28984205722165,0.149254802886874,0.233713309847224,0,0,0,0,0.228840068396924,0.151230923763239,0,0.147855149989634,0,0,0.155262956876259,0,0,0,0,0,0.406870733204662,0,0.107410557042488,0,0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| ||
|short_description=p12@FAM57A | |short_description=p12@FAM57A | ||
}} | }} |
Latest revision as of 21:20, 16 September 2015
Short description: | p12@FAM57A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_FAM57A_5end |
Coexpression cluster: | NA |
Association with transcript: | 12bp_to_BC009729_5end |
EntrezGene: | FAM57A |
HGNC: | 29646 |
UniProt: | Q8TBR7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 7.86e-20 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.86e-20 | 42 |
granulocyte monocyte progenitor cell | 3.77e-19 | 67 |
macrophage dendritic cell progenitor | 3.07e-18 | 61 |
myeloid leukocyte | 1.38e-17 | 72 |
defensive cell | 4.10e-17 | 48 |
phagocyte | 4.10e-17 | 48 |
myeloid cell | 9.27e-17 | 108 |
common myeloid progenitor | 9.27e-17 | 108 |
CD1a-positive Langerhans cell | 1.60e-16 | 2 |
immature CD1a-positive Langerhans cell | 1.60e-16 | 2 |
leukocyte | 2.18e-14 | 136 |
Langerhans cell | 2.92e-14 | 5 |
myeloid lineage restricted progenitor cell | 5.10e-14 | 66 |
monopoietic cell | 2.62e-13 | 59 |
monocyte | 2.62e-13 | 59 |
monoblast | 2.62e-13 | 59 |
promonocyte | 2.62e-13 | 59 |
hematopoietic oligopotent progenitor cell | 1.22e-11 | 161 |
hematopoietic multipotent progenitor cell | 1.22e-11 | 161 |
hematopoietic lineage restricted progenitor cell | 3.61e-11 | 120 |
hematopoietic stem cell | 5.12e-11 | 168 |
hematopoietic cell | 2.75e-10 | 177 |
conventional dendritic cell | 3.84e-08 | 8 |
nongranular leukocyte | 3.50e-07 | 115 |
mesenchymal cell | 5.21e-07 | 354 |
connective tissue cell | 8.61e-07 | 361 |
dendritic cell | 9.70e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.32e-16 | 76 |
bone element | 3.25e-15 | 82 |
skeletal element | 1.20e-13 | 90 |
immune system | 3.97e-13 | 93 |
hematopoietic system | 2.48e-12 | 98 |
blood island | 2.48e-12 | 98 |
skeletal system | 4.91e-12 | 100 |
hemolymphoid system | 5.84e-11 | 108 |