FFCP PHASE1:Hg19::chr3:182817229..182817239,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=56922 | |EntrezGene=56922 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6936 | |HGNC=6936 | ||
|TSSclassifier=strong | |||
|UniProt=E7ETG7 | |UniProt=E7ETG7 | ||
|association_with_transcript=8bp_to_ENST00000392616_5end | |association_with_transcript=8bp_to_ENST00000392616_5end | ||
|cluster_id=chr3:182817229..182817239,- | |||
|description=CAGE_peak_4_at_MCCC1_5end | |description=CAGE_peak_4_at_MCCC1_5end | ||
|id=chr3:182817229..182817239,- | |id=chr3:182817229..182817239,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.30e-21!115;UBERON:0001049!1.29e-11!57;UBERON:0005068!1.29e-11!57;UBERON:0006241!1.29e-11!57;UBERON:0007135!1.29e-11!57;UBERON:0002619!1.80e-11!22;UBERON:0001017!7.99e-11!82;UBERON:0001950!1.10e-10!20;UBERON:0001893!1.36e-10!34;UBERON:0003080!1.37e-10!42;UBERON:0002780!2.86e-10!41;UBERON:0001890!2.86e-10!41;UBERON:0006240!2.86e-10!41;UBERON:0002791!3.07e-10!33;UBERON:0000956!4.18e-10!25;UBERON:0000203!4.18e-10!25;UBERON:0005743!5.02e-10!86;UBERON:0001869!5.04e-10!32;UBERON:0002020!6.70e-10!34;UBERON:0003528!6.70e-10!34;UBERON:0000073!7.33e-10!94;UBERON:0001016!7.33e-10!94;UBERON:0002616!1.88e-09!59;UBERON:0000955!3.21e-09!69;UBERON:0006238!3.21e-09!69;UBERON:0004111!1.64e-07!241 | |ontology_enrichment_uberon=UBERON:0007023!5.30e-21!115;UBERON:0001049!1.29e-11!57;UBERON:0005068!1.29e-11!57;UBERON:0006241!1.29e-11!57;UBERON:0007135!1.29e-11!57;UBERON:0002619!1.80e-11!22;UBERON:0001017!7.99e-11!82;UBERON:0001950!1.10e-10!20;UBERON:0001893!1.36e-10!34;UBERON:0003080!1.37e-10!42;UBERON:0002780!2.86e-10!41;UBERON:0001890!2.86e-10!41;UBERON:0006240!2.86e-10!41;UBERON:0002791!3.07e-10!33;UBERON:0000956!4.18e-10!25;UBERON:0000203!4.18e-10!25;UBERON:0005743!5.02e-10!86;UBERON:0001869!5.04e-10!32;UBERON:0002020!6.70e-10!34;UBERON:0003528!6.70e-10!34;UBERON:0000073!7.33e-10!94;UBERON:0001016!7.33e-10!94;UBERON:0002616!1.88e-09!59;UBERON:0000955!3.21e-09!69;UBERON:0006238!3.21e-09!69;UBERON:0004111!1.64e-07!241 | ||
|ontology_enrichment_uberon_v019=UBERON:0001950;4.96e-14;20!UBERON:0002619;1.55e-12;22!UBERON:0001872;9.02e-11;5!UBERON:0000956;9.83e-11;25!UBERON:0000203;9.83e-11;25!UBERON:0001869;8.07e-09;32!UBERON:0002791;9.25e-09;32!UBERON:0001893;7.75e-08;34!UBERON:0003528;1.48e-07;34!UBERON:0002020;1.48e-07;34!UBERON:0002021;6.81e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001950,9.24e-14,20;UBERON:0002619,2.70e-12,22;UBERON:0007023,3.15e-12,114;UBERON:0000956,1.59e-10,25;UBERON:0000203,1.59e-10,25;UBERON:0001872,1.79e-10,5;UBERON:0002791,4.20e-09,32;UBERON:0001869,4.20e-09,32;UBERON:0002780,9.40e-09,41;UBERON:0001890,9.40e-09,41;UBERON:0003080,9.40e-09,41;UBERON:0006240,9.40e-09,41;UBERON:0003528,2.12e-08,34;UBERON:0002020,2.12e-08,34;UBERON:0001893,2.12e-08,34;UBERON:0001049,2.02e-07,56;UBERON:0005068,2.02e-07,56;UBERON:0006241,2.02e-07,56;UBERON:0007135,2.02e-07,56;UBERON:0000073,4.94e-07,53;UBERON:0002616,4.94e-07,53;UBERON:0001016,6.84e-07,89 | |||
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320568492303233 | ||
|short_description=p4@MCCC1 | |short_description=p4@MCCC1 | ||
}} | }} |
Latest revision as of 23:11, 16 September 2015
Short description: | p4@MCCC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_MCCC1_5end |
Coexpression cluster: | NA |
Association with transcript: | 8bp_to_ENST00000392616_5end |
EntrezGene: | MCCC1 |
HGNC: | 6936 |
UniProt: | E7ETG7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neocortex | 9.24e-14 | 20 |
regional part of cerebral cortex | 2.70e-12 | 22 |
adult organism | 3.15e-12 | 114 |
cerebral cortex | 1.59e-10 | 25 |
pallium | 1.59e-10 | 25 |
parietal lobe | 1.79e-10 | 5 |
regional part of telencephalon | 4.20e-09 | 32 |
cerebral hemisphere | 4.20e-09 | 32 |
regional part of forebrain | 9.40e-09 | 41 |
forebrain | 9.40e-09 | 41 |
anterior neural tube | 9.40e-09 | 41 |
future forebrain | 9.40e-09 | 41 |
brain grey matter | 2.12e-08 | 34 |
gray matter | 2.12e-08 | 34 |
telencephalon | 2.12e-08 | 34 |
neural tube | 2.02e-07 | 56 |
neural rod | 2.02e-07 | 56 |
future spinal cord | 2.02e-07 | 56 |
neural keel | 2.02e-07 | 56 |
regional part of nervous system | 4.94e-07 | 53 |
regional part of brain | 4.94e-07 | 53 |
nervous system | 6.84e-07 | 89 |