FFCP PHASE1:Hg19::chr9:22447422..22447483,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr9:22447422..22447483,+ to FFCP PHASE1:Hg19::chr9:22447422..22447483,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=63951 | |EntrezGene=63951 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=13826 | |HGNC=13826 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_AK130018_5end | |||
|cluster_id=chr9:22447422..22447483,+ | |||
|description=CAGE_peak_1_at_DMRTA1_5end | |||
|id=chr9:22447422..22447483,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.15e-12!254 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.18e-10,253;CL:0000223,2.25e-07,58 | |||
|ontology_enrichment_development_v019=UBERON:0008947;1.43e-10;29!UBERON:0001041;3.79e-08;30!UBERON:0006595;3.70e-07;86 | |||
|ontology_enrichment_disease=DOID:305!8.08e-12!106;DOID:0050687!2.13e-08!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,5.13e-09,106 | |||
|ontology_enrichment_uberon=UBERON:0004119!5.33e-15!169;UBERON:0000925!5.33e-15!169;UBERON:0006595!5.33e-15!169;UBERON:0007023!7.63e-15!115;UBERON:0001007!2.05e-14!155;UBERON:0001555!2.05e-14!155;UBERON:0007026!2.05e-14!155;UBERON:0004921!1.86e-13!129;UBERON:0004185!1.86e-13!129;UBERON:0001004!4.19e-13!72;UBERON:0001041!1.15e-12!98;UBERON:0000065!1.99e-12!53;UBERON:0008947!3.02e-12!38;UBERON:0003258!3.02e-12!38;UBERON:0000077!4.13e-12!130;UBERON:0000466!3.72e-11!126;UBERON:0001048!4.31e-10!168;UBERON:0000464!8.35e-10!104;UBERON:0005911!2.32e-09!82;UBERON:0000481!8.21e-09!347;UBERON:0000072!9.95e-09!46;UBERON:0000063!1.52e-08!97;UBERON:0000922!5.11e-08!612;UBERON:0005178!7.24e-08!34;UBERON:0002224!7.24e-08!34;UBERON:0002048!1.51e-07!22;UBERON:0000117!1.51e-07!22;UBERON:0000171!1.51e-07!22;UBERON:0000170!1.51e-07!22;UBERON:0005597!1.51e-07!22;UBERON:0000118!1.51e-07!22;UBERON:0005181!2.17e-07!35;UBERON:0000062!3.10e-07!511;UBERON:0000468!3.34e-07!659;UBERON:0005177!6.18e-07!107 | |||
|ontology_enrichment_uberon_v019=UBERON:0002048;5.49e-09;22!UBERON:0000117;5.49e-09;22!UBERON:0000171;5.49e-09;22!UBERON:0000170;5.49e-09;22!UBERON:0000065;7.19e-09;44!UBERON:0004807;1.36e-08;22!UBERON:0005178;1.87e-07;34!UBERON:0002224;1.87e-07;34!UBERON:0005181;3.93e-07;35 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,4.91e-19,160;UBERON:0000925,4.91e-19,160;UBERON:0006595,4.91e-19,160;UBERON:0001007,3.02e-17,145;UBERON:0001555,3.02e-17,145;UBERON:0007026,3.02e-17,145;UBERON:0004921,1.85e-14,118;UBERON:0005911,8.74e-14,82;UBERON:0001041,2.05e-12,87;UBERON:0001004,2.63e-12,74;UBERON:0000065,4.54e-11,54;UBERON:0008947,2.00e-10,38;UBERON:0003258,2.00e-10,38;UBERON:0005177,2.24e-09,101;UBERON:0002048,7.42e-09,22;UBERON:0000117,7.42e-09,22;UBERON:0000171,7.42e-09,22;UBERON:0000170,7.42e-09,22;UBERON:0005597,7.42e-09,22;UBERON:0000118,7.42e-09,22;UBERON:0005178,7.51e-09,34;UBERON:0002224,7.51e-09,34;UBERON:0005181,1.83e-08,35;UBERON:0005153,1.58e-07,37;UBERON:0001048,2.07e-07,160 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0.563817616383885,0,0.446961094427288,0.872338524100369,2.53299878168311,0,0,0,0,0,0.263766978228454,0.990130823680373,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0,0,0,0,5.51652734687356,0.6024118375565,1.47901604066715,0,0,0.880801318004542,0,0,0,0,0,0,0,0,0,0,0,0.309706370895104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0.616804496998528,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0.756278537312543,0.665188192387692,0.527008714158756,3.20898734969396,0.364295288292542,0.370784442784429,0,0,0,0,0,0,0,0.860234595106124,0,0,0,0,0,0.516833518338658,0,0,0,0,0,0,0,2.05389375053383,3.14341121676638,0.563057402416611,0,0.949265659568129,0.549605231791222,0,0,0.436094052142534,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974370051611986,0,0,0,0,0,0,2.31913023795956,1.09098448236334,2.29443676311203,0.975789649036763,1.06023814657188,1.97529702878181,1.14027160516907,1.26160425437814,1.09493207722749,0,0,0,0,0,0.946454400318751,1.68584690078102,1.68707720918437,0.992645754591546,1.30727666455444,1.66089433377768,0.269662616320329,0.98110732562673,0.769494313892781,0,0,0,0,11.4079531339648,6.87979051674338,7.08947888017685,0,0,1.20097467208968,0.658501712451753,0,0.100528972411631,3.24059558054854,0,0,0,0.231860809950154,0.352226082707465,0,0,0,0,0,0,0,0,0.93733833986777,0.503946384596579,1.55952606966625,0.0895585227028483,0,0,0,0,0,0,0.37872730027914,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0.266422179016099,0.142977993658148,0,0,0,0,0,0,0.871533458600294,0.099972991182057,0,0,0,1.19812427745791,3.44585807502342,1.42636905040718,1.44781306667579,0.821905290201534,0.537182889719687,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0.49076596687656,2.00068208423871,0,0,0,0,0,0.300946099727719,0,0,0,0.737476674166813,0,0,0,0,0.647142602455851,0,0,0,0.30239029332968,0,0,0,0.384417447767103,1.02341449813341,0.482561763430822,1.48418066444991,0,0,0.0821271560138091,0,0,0,0.802025881213139,2.94659164594868,0,0,0,0,1.69433741629712,0,0,1.26661954671451,0,0,0.215915916102139,0,0,0.501689773854853,0,0,0.447749509444357,0,0,1.79515087581472,0,0.976135183992909,6.38854272215878,1.28197250745681,1.65018999841176,1.14853107599234,1.30012049207304,0,0,0,0,0,0,0,0,0,1.32227932288782,1.53752053892085,2.67986696238627,3.4393645490887,0,0,0,0.308033580176089,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.66343897524122,0,0,0.655894752046633,0.202910376962704,0,0,0,0,0.35667105148125,0.709522128141196,0,0,0,0,2.11688647996127,0.670302275535787,0,6.02520324971387,0,0,0,2.29723400206959,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.447352215784832,0.333698283423817,0,0,0,0,0,0,0,2.4906390476222,0,0,0,0.23874448473769,0,0.307160702099232,0,0.281338832821026,0.556543525114529,0,0,0.996239941255349,0.828851746593443,0,0,0,0,3.05552393900911,0.537063524026827,0,1.28236427328014,0,0,0,0.0927680981618513,0,0.520855522170466,0,1.44999915086959,0.227586896570999,3.0510438035132,4.25497827182285,0.689486746482929,0.583209226766509,0,0,0.60298219312704,1.52581736317083,0.221158519862449,0,0,1.30726156222788,0.278847488557207,0.615602068030377,0.91153644677601,0,0.359030577639089,0,0.638002319463839,0.0915975934018623,0,0,0,0.498635045700469,0,0,0,0,0.158936578980379,1.47698645169619,0.979396848954886,0,0.216388639742091,3.98104772431402,0.973033209536731,2.4441205797345,0.889563386041866,0.617819694732514,0.417687798021821,0.539209063845416,0,0.234264445725339,0,2.34797542718508,0,1.18375320854817,2.41981432097328,0,0.063186579628488,0,0.103688191397247,0,0,0,0,2.84609546029793,0,0.173559738335131,0,0.609414446062818,3.31980669659857,0,0.677294319023596,0.803982487948041,0.574808199372465,3.39461557709468,0,0.90392296312213,0.411125773940253,0,0.126621591911757,1.95551382734803,5.05000567584662,2.56143593687223,0,1.29681375438695,0.229073192331831,7.03539491234055,2.16082196982225,0,1.17847017308398,0.271808412147228,0.104602846312333,0,0.288950589901519,0,0.410716136675979,0,2.57859264851974,0,0.279282401272254,0.916641696046735,0,2.79550600698588,1.28767814440971,2.23171457441873,0,0,1.16495949527454,0.0787831823072236,0,0,5.01980155725219,0,0,0.272406812223151,3.3758161177654,1.92555211236127,1.66176135211674,0,0,0.303747783290123,0,5.20117668174708,0.83927341015997,2.21760706690754,1.07572403599707,2.30298236783334,1.42939065274673,2.64836788146173,0,0,0,0,1.19730191562487,0.574647645245373,0,0.566560457600628,12.456939862637,0,0.129282956361551,0,3.07956308191793,0.704815022316672,3.09683496446315,2.67247318669432,4.14239055347196,1.48849806543585,0,0,0,2.1760712134779,3.2589686222951,3.06345576763462,4.59021682993726,0,0,0.366078794705889,0.250381861413,0.573409195690071,0.332787154610557,0.496771223531068,0.55339453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| ||
|short_description=p1@DMRTA1 | |||
}} | }} |
Latest revision as of 23:51, 16 September 2015
Short description: | p1@DMRTA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_DMRTA1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_AK130018_5end |
EntrezGene: | DMRTA1 |
HGNC: | 13826 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.18e-10 | 253 |
endodermal cell | 2.25e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 4.91e-19 | 160 |
endoderm | 4.91e-19 | 160 |
presumptive endoderm | 4.91e-19 | 160 |
digestive system | 3.02e-17 | 145 |
digestive tract | 3.02e-17 | 145 |
primitive gut | 3.02e-17 | 145 |
subdivision of digestive tract | 1.85e-14 | 118 |
endo-epithelium | 8.74e-14 | 82 |
foregut | 2.05e-12 | 87 |
respiratory system | 2.63e-12 | 74 |
respiratory tract | 4.54e-11 | 54 |
respiratory primordium | 2.00e-10 | 38 |
endoderm of foregut | 2.00e-10 | 38 |
trunk region element | 2.24e-09 | 101 |
lung | 7.42e-09 | 22 |
respiratory tube | 7.42e-09 | 22 |
respiration organ | 7.42e-09 | 22 |
pair of lungs | 7.42e-09 | 22 |
lung primordium | 7.42e-09 | 22 |
lung bud | 7.42e-09 | 22 |
thoracic cavity element | 7.51e-09 | 34 |
thoracic cavity | 7.51e-09 | 34 |
thoracic segment organ | 1.83e-08 | 35 |
epithelial bud | 1.58e-07 | 37 |
primordium | 2.07e-07 | 160 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 5.13e-09 | 106 |