FFCP PHASE1:Hg19::chr2:37193648..37193760,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6801 | |EntrezGene=6801 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11424 | |HGNC=11424 | ||
|TSSclassifier=strong | |||
|UniProt=O43815 | |UniProt=O43815 | ||
|association_with_transcript=-33bp_to_ENST00000263918,NM_003162,uc002rpn.2,uc010ezx.2_5end | |association_with_transcript=-33bp_to_ENST00000263918,NM_003162,uc002rpn.2,uc010ezx.2_5end | ||
|cluster_id=chr2:37193648..37193760,- | |||
|description=CAGE_peak_1_at_STRN_5end | |description=CAGE_peak_1_at_STRN_5end | ||
|id=chr2:37193648..37193760,- | |id=chr2:37193648..37193760,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.27e-39!115;UBERON:0001049!3.36e-13!57;UBERON:0005068!3.36e-13!57;UBERON:0006241!3.36e-13!57;UBERON:0007135!3.36e-13!57;UBERON:0003080!1.41e-12!42;UBERON:0002780!4.86e-12!41;UBERON:0001890!4.86e-12!41;UBERON:0006240!4.86e-12!41;UBERON:0001893!6.25e-11!34;UBERON:0002616!1.04e-10!59;UBERON:0002020!1.35e-10!34;UBERON:0003528!1.35e-10!34;UBERON:0001017!1.61e-10!82;UBERON:0002791!1.63e-10!33;UBERON:0001869!4.69e-10!32;UBERON:0000955!5.08e-10!69;UBERON:0006238!5.08e-10!69;UBERON:0005743!5.61e-09!86;UBERON:0000073!1.12e-07!94;UBERON:0001016!1.12e-07!94;UBERON:0002619!2.83e-07!22;UBERON:0001950!8.37e-07!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;7.98e-11;114!UBERON:0002791;2.23e-09;32!UBERON:0002780;2.47e-09;41!UBERON:0001890;2.47e-09;41!UBERON:0001893;3.05e-09;34!UBERON:0001869;3.57e-09;32!UBERON:0003528;4.85e-09;34!UBERON:0002020;4.85e-09;34!UBERON:0000073;2.25e-07;53!UBERON:0002616;2.25e-07;53!UBERON:0002619;2.52e-07;22!UBERON:0001950;7.66e-07;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.26e-38,114;UBERON:0001049,1.08e-12,56;UBERON:0005068,1.08e-12,56;UBERON:0006241,1.08e-12,56;UBERON:0007135,1.08e-12,56;UBERON:0002780,4.86e-12,41;UBERON:0001890,4.86e-12,41;UBERON:0003080,4.86e-12,41;UBERON:0006240,4.86e-12,41;UBERON:0000073,7.07e-12,53;UBERON:0002616,7.07e-12,53;UBERON:0001893,6.25e-11,34;UBERON:0003528,1.35e-10,34;UBERON:0002020,1.35e-10,34;UBERON:0002791,4.10e-10,32;UBERON:0001017,4.22e-10,81;UBERON:0001869,4.69e-10,32;UBERON:0000955,1.37e-09,68;UBERON:0006238,1.37e-09,68;UBERON:0001016,1.33e-08,89;UBERON:0002619,2.83e-07,22;UBERON:0001950,8.37e-07,20 | |||
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| ||
|short_description=p1@STRN | |short_description=p1@STRN | ||
}} | }} |
Latest revision as of 01:45, 17 September 2015
Short description: | p1@STRN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_STRN_5end |
Coexpression cluster: | NA |
Association with transcript: | -33bp_to_ENST00000263918, NM_003162, uc002rpn.2, uc010ezx.2_5end |
EntrezGene: | STRN |
HGNC: | 11424 |
UniProt: | O43815 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 1.26e-38 | 114 |
neural tube | 1.08e-12 | 56 |
neural rod | 1.08e-12 | 56 |
future spinal cord | 1.08e-12 | 56 |
neural keel | 1.08e-12 | 56 |
regional part of forebrain | 4.86e-12 | 41 |
forebrain | 4.86e-12 | 41 |
anterior neural tube | 4.86e-12 | 41 |
future forebrain | 4.86e-12 | 41 |
regional part of nervous system | 7.07e-12 | 53 |
regional part of brain | 7.07e-12 | 53 |
telencephalon | 6.25e-11 | 34 |
brain grey matter | 1.35e-10 | 34 |
gray matter | 1.35e-10 | 34 |
regional part of telencephalon | 4.10e-10 | 32 |
central nervous system | 4.22e-10 | 81 |
cerebral hemisphere | 4.69e-10 | 32 |
brain | 1.37e-09 | 68 |
future brain | 1.37e-09 | 68 |
nervous system | 1.33e-08 | 89 |
regional part of cerebral cortex | 2.83e-07 | 22 |
neocortex | 8.37e-07 | 20 |